Protein–RNA interactions for Protein: P28702

RXRB, Retinoic acid receptor RXR-beta, humanhuman

Predictions only

Length 533 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RXRBP28702 IL1F10-201ENST00000341010 1013 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
RXRBP28702 GYG2-201ENST00000353656 1293 ntAPPRIS ALT2 TSL 5 BASIC19.34■□□□□ 0.69
RXRBP28702 PGAM1P11-201ENST00000416729 680 ntBASIC19.34■□□□□ 0.69
RXRBP28702 Z82185.1-201ENST00000417792 549 ntTSL 4 BASIC19.34■□□□□ 0.69
RXRBP28702 AP000911.1-202ENST00000532706 543 ntTSL 4 BASIC19.34■□□□□ 0.69
RXRBP28702 F11R-204ENST00000537746 1245 ntTSL 2 BASIC19.34■□□□□ 0.69
RXRBP28702 TMEM14C-205ENST00000541412 1177 ntAPPRIS P1 TSL 2 BASIC19.34■□□□□ 0.69
RXRBP28702 AP001094.3-201ENST00000580491 616 ntTSL 2 BASIC19.34■□□□□ 0.69
RXRBP28702 CSTP2-201ENST00000610599 398 ntBASIC19.34■□□□□ 0.69
RXRBP28702 NF1P11-201ENST00000621292 1282 ntBASIC19.34■□□□□ 0.69
RXRBP28702 CYP1B1-AS1-221ENST00000627172 995 ntTSL 5 BASIC19.34■□□□□ 0.69
RXRBP28702 CCNYL1-201ENST00000295414 3767 ntTSL 5 BASIC19.34■□□□□ 0.69
RXRBP28702 UBE2L5P-202ENST00000635918 1513 ntAPPRIS P1 TSL 5 BASIC19.34■□□□□ 0.69
RXRBP28702 TGFB1I1-202ENST00000394858 1803 ntAPPRIS P3 TSL 1 (best) BASIC19.34■□□□□ 0.69
RXRBP28702 BAZ1A-203ENST00000382422 5775 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
RXRBP28702 AVPR1A-201ENST00000299178 5963 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
RXRBP28702 F11R-206ENST00000621309 4770 ntTSL 5 BASIC19.34■□□□□ 0.69
RXRBP28702 EVX1-202ENST00000496902 2955 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
RXRBP28702 ONECUT1-201ENST00000305901 2092 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
RXRBP28702 SH2B3-202ENST00000538307 2062 ntTSL 2 BASIC19.34■□□□□ 0.69
RXRBP28702 SEPT9-202ENST00000423034 3984 ntAPPRIS ALT1 TSL 1 (best) BASIC19.34■□□□□ 0.69
RXRBP28702 WAC-202ENST00000347934 2839 ntTSL 5 BASIC19.33■□□□□ 0.69
RXRBP28702 PTPN20-206ENST00000395722 1995 ntTSL 1 (best) BASIC19.33■□□□□ 0.69
RXRBP28702 EEPD1-201ENST00000242108 4765 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.69
RXRBP28702 C21orf33-201ENST00000291577 1674 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.69
RXRBP28702 MPL-201ENST00000372470 1908 ntAPPRIS P2 TSL 1 (best) BASIC19.33■□□□□ 0.69
RXRBP28702 FKBP4P8-201ENST00000610931 1369 ntBASIC19.33■□□□□ 0.69
RXRBP28702 TMC5-203ENST00000396229 4917 ntAPPRIS ALT2 TSL 5 BASIC19.33■□□□□ 0.69
RXRBP28702 COLEC11-203ENST00000382062 1633 ntTSL 1 (best) BASIC19.33■□□□□ 0.69
RXRBP28702 SEPHS1-206ENST00000545675 2988 ntTSL 1 (best) BASIC19.33■□□□□ 0.69
RXRBP28702 KLK4-201ENST00000324041 1347 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.69
RXRBP28702 COQ8A-201ENST00000366777 2872 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.69
RXRBP28702 CDCA5-201ENST00000275517 2587 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.69
RXRBP28702 KLHDC10-201ENST00000335420 6437 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.69
RXRBP28702 ITPK1-202ENST00000354313 2803 ntTSL 1 (best) BASIC19.33■□□□□ 0.69
RXRBP28702 IFNLR1-204ENST00000374419 953 ntTSL 5 BASIC19.33■□□□□ 0.68
RXRBP28702 MAD2L2-206ENST00000376672 1002 ntTSL 3 BASIC19.33■□□□□ 0.68
RXRBP28702 GNRH2-204ENST00000380347 758 ntAPPRIS ALT2 TSL 5 BASIC19.33■□□□□ 0.68
RXRBP28702 GEMIN8P4-201ENST00000380526 729 ntBASIC19.33■□□□□ 0.68
RXRBP28702 TMEM216-202ENST00000398979 908 ntTSL 1 (best) BASIC19.33■□□□□ 0.68
RXRBP28702 LRRC3-AS1-201ENST00000426578 784 ntTSL 3 BASIC19.33■□□□□ 0.68
RXRBP28702 RPL15-208ENST00000435882 1063 ntAPPRIS P1 TSL 2 BASIC19.33■□□□□ 0.68
RXRBP28702 MYL6-215ENST00000549566 685 ntTSL 2 BASIC19.33■□□□□ 0.68
RXRBP28702 BID-209ENST00000551952 700 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
RXRBP28702 SNHG25-202ENST00000582965 278 ntTSL 2 BASIC19.33■□□□□ 0.68
RXRBP28702 AC005786.2-201ENST00000592368 369 ntTSL 3 BASIC19.33■□□□□ 0.68
RXRBP28702 MIR6893-201ENST00000613458 69 ntBASIC19.33■□□□□ 0.68
RXRBP28702 AL513478.2-202ENST00000621949 835 ntTSL 3 BASIC19.33■□□□□ 0.68
RXRBP28702 ADAMTS9-AS1-216ENST00000626280 882 ntTSL 5 BASIC19.33■□□□□ 0.68
RXRBP28702 BTNL8-203ENST00000400707 1512 ntTSL 2 BASIC19.33■□□□□ 0.68
RXRBP28702 KCTD6-205ENST00000490264 1759 ntAPPRIS P1 TSL 5 BASIC19.33■□□□□ 0.68
RXRBP28702 SLC35B2-206ENST00000615337 2014 ntTSL 4 BASIC19.33■□□□□ 0.68
RXRBP28702 CCDC3-201ENST00000378825 2731 ntAPPRIS P3 TSL 1 (best) BASIC19.33■□□□□ 0.68
RXRBP28702 GRHPR-212ENST00000607784 1704 ntTSL 5 BASIC19.33■□□□□ 0.68
RXRBP28702 HTR3D-201ENST00000334128 1459 ntTSL 1 (best) BASIC19.33■□□□□ 0.68
RXRBP28702 KCNQ2-209ENST00000625514 2925 ntTSL 5 BASIC19.33■□□□□ 0.68
RXRBP28702 IFFO1-202ENST00000356896 2680 ntTSL 5 BASIC19.33■□□□□ 0.68
RXRBP28702 CALR-201ENST00000316448 1903 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
RXRBP28702 TMPRSS4-214ENST00000523251 1689 ntAPPRIS ALT2 TSL 2 BASIC19.33■□□□□ 0.68
RXRBP28702 SEC14L2-215ENST00000617837 2632 ntTSL 2 BASIC19.33■□□□□ 0.68
RXRBP28702 C5orf38-207ENST00000515640 1441 ntAPPRIS ALT2 TSL 3 BASIC19.33■□□□□ 0.68
RXRBP28702 PDGFB-201ENST00000331163 3497 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
RXRBP28702 SPO11-203ENST00000371263 1834 ntAPPRIS P4 TSL 1 (best) BASIC19.32■□□□□ 0.68
RXRBP28702 SASH1-201ENST00000367467 7711 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
RXRBP28702 SLMAP-201ENST00000295951 5433 ntAPPRIS P1 TSL 5 BASIC19.32■□□□□ 0.68
RXRBP28702 PPM1F-202ENST00000397495 1778 ntTSL 2 BASIC19.32■□□□□ 0.68
RXRBP28702 MAD2L1BP-201ENST00000372171 1301 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
RXRBP28702 SAP130-202ENST00000259235 4065 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
RXRBP28702 ALOX12P2-203ENST00000570921 1945 ntBASIC19.32■□□□□ 0.68
RXRBP28702 NOMO2-212ENST00000622306 4252 ntAPPRIS P3 TSL 1 (best) BASIC19.32■□□□□ 0.68
RXRBP28702 BAX-205ENST00000391871 687 ntTSL 5 BASIC19.32■□□□□ 0.68
RXRBP28702 BX088651.3-201ENST00000418155 352 ntBASIC19.32■□□□□ 0.68
RXRBP28702 AC018814.1-201ENST00000418972 357 ntTSL 3 BASIC19.32■□□□□ 0.68
RXRBP28702 AL080243.1-201ENST00000423293 1060 ntBASIC19.32■□□□□ 0.68
RXRBP28702 RBPMSLP-201ENST00000433427 502 ntBASIC19.32■□□□□ 0.68
RXRBP28702 AC098934.1-203ENST00000442868 1262 ntBASIC19.32■□□□□ 0.68
RXRBP28702 SLC25A15P1-201ENST00000456738 342 ntBASIC19.32■□□□□ 0.68
RXRBP28702 PFN2-212ENST00000490975 858 ntTSL 4 BASIC19.32■□□□□ 0.68
RXRBP28702 SLC25A15P3-201ENST00000505530 290 ntBASIC19.32■□□□□ 0.68
RXRBP28702 SEPHS2P1-201ENST00000511618 1162 ntBASIC19.32■□□□□ 0.68
RXRBP28702 TRMT10B-207ENST00000537911 2108 ntTSL 2 BASIC19.32■□□□□ 0.68
RXRBP28702 AP001269.2-201ENST00000590055 379 ntTSL 3 BASIC19.32■□□□□ 0.68
RXRBP28702 ZNF671-203ENST00000596939 977 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
RXRBP28702 RPL18A-204ENST00000599898 491 ntTSL 2 BASIC19.32■□□□□ 0.68
RXRBP28702 TTC28-AS1_3.1-201ENST00000615579 181 ntBASIC19.32■□□□□ 0.68
RXRBP28702 ZP3-201ENST00000336517 1483 ntAPPRIS P3 TSL 1 (best) BASIC19.32■□□□□ 0.68
RXRBP28702 LHCGR-202ENST00000401907 1477 ntTSL 5 BASIC19.32■□□□□ 0.68
RXRBP28702 SP100-204ENST00000409341 1898 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
RXRBP28702 SEPT11-206ENST00000505788 2079 ntAPPRIS ALT1 TSL 5 BASIC19.32■□□□□ 0.68
RXRBP28702 AC006449.6-201ENST00000612330 2296 ntBASIC19.32■□□□□ 0.68
RXRBP28702 RAPGEFL1-212ENST00000620260 3855 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
RXRBP28702 UBE3A-201ENST00000232165 5051 ntAPPRIS P3 TSL 5 BASIC19.32■□□□□ 0.68
RXRBP28702 AL031658.1-201ENST00000449519 2013 ntTSL 2 BASIC19.32■□□□□ 0.68
RXRBP28702 PGLYRP2-202ENST00000340880 2230 ntAPPRIS P2 TSL 1 (best) BASIC19.32■□□□□ 0.68
RXRBP28702 STIM2-212ENST00000639640 2241 ntAPPRIS P3 TSL 1 (best) BASIC19.32■□□□□ 0.68
RXRBP28702 PRRT2-207ENST00000572820 2403 ntAPPRIS P1 TSL 5 BASIC19.32■□□□□ 0.68
RXRBP28702 SCARB2-223ENST00000640640 4608 ntTSL 5 BASIC19.32■□□□□ 0.68
RXRBP28702 RAP1GAP2-209ENST00000637138 3175 ntTSL 5 BASIC19.32■□□□□ 0.68
RXRBP28702 ELFN2-208ENST00000430883 1970 ntTSL 2 BASIC19.32■□□□□ 0.68
RXRBP28702 UBOX5-AS1-201ENST00000446537 1792 ntTSL 2 BASIC19.32■□□□□ 0.68
Retrieved 100 of 98,524 protein–RNA pairs in 40.6 ms