Protein–RNA interactions for Protein: P20333

TNFRSF1B, Tumor necrosis factor receptor superfamily member 1B, humanhuman

Predictions only

Length 461 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF1BP20333 CBR3-AS1-216ENST00000624883 564 ntTSL 3 BASIC14.19□□□□□ -0.14
TNFRSF1BP20333 AC105277.1-203ENST00000635492 1293 ntTSL 5 BASIC14.19□□□□□ -0.14
TNFRSF1BP20333 SFMBT1-201ENST00000394752 4548 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
TNFRSF1BP20333 OSBPL7-211ENST00000613735 2836 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
TNFRSF1BP20333 LINC00924-202ENST00000556053 2682 ntTSL 2 BASIC14.19□□□□□ -0.14
TNFRSF1BP20333 OR4D1-202ENST00000641449 4925 ntAPPRIS P1 BASIC14.19□□□□□ -0.14
TNFRSF1BP20333 ZNF655-201ENST00000252713 2535 ntAPPRIS P3 TSL 1 (best) BASIC14.19□□□□□ -0.14
TNFRSF1BP20333 ACOT9-201ENST00000336430 1675 ntAPPRIS P3 TSL 1 (best) BASIC14.19□□□□□ -0.14
TNFRSF1BP20333 PTGES3-202ENST00000414274 1547 ntTSL 2 BASIC14.19□□□□□ -0.14
TNFRSF1BP20333 SMARCA4-207ENST00000541122 5139 ntAPPRIS P4 TSL 5 BASIC14.19□□□□□ -0.14
TNFRSF1BP20333 SLC4A7-210ENST00000440156 4120 ntAPPRIS ALT2 TSL 1 (best) BASIC14.19□□□□□ -0.14
TNFRSF1BP20333 LILRP1-201ENST00000444199 1370 ntBASIC14.19□□□□□ -0.14
TNFRSF1BP20333 MAGEA2-209ENST00000623806 2025 ntAPPRIS P1 TSL 2 BASIC14.19□□□□□ -0.14
TNFRSF1BP20333 AC138969.3-201ENST00000546612 1459 ntBASIC14.18□□□□□ -0.14
TNFRSF1BP20333 AC138932.2-201ENST00000548268 1459 ntBASIC14.18□□□□□ -0.14
TNFRSF1BP20333 AC126755.4-201ENST00000549796 1459 ntBASIC14.18□□□□□ -0.14
TNFRSF1BP20333 CBX3-202ENST00000396386 1857 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
TNFRSF1BP20333 ITSN1-212ENST00000399367 5722 ntAPPRIS ALT1 TSL 1 (best) BASIC14.18□□□□□ -0.14
TNFRSF1BP20333 ACTN2-206ENST00000542672 4906 ntAPPRIS ALT1 TSL 1 (best) BASIC14.18□□□□□ -0.14
TNFRSF1BP20333 PTPRA-201ENST00000216877 3725 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
TNFRSF1BP20333 C8orf76-201ENST00000276704 1341 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
TNFRSF1BP20333 PRKD1-202ENST00000415220 3189 ntAPPRIS ALT2 TSL 5 BASIC14.18□□□□□ -0.14
TNFRSF1BP20333 FAM8A1-201ENST00000259963 4677 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
TNFRSF1BP20333 PRPS1-204ENST00000372435 2073 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
TNFRSF1BP20333 AC002310.1-201ENST00000457283 1445 ntTSL 2 BASIC14.18□□□□□ -0.14
TNFRSF1BP20333 TAP2-201ENST00000374897 5684 ntAPPRIS P2 TSL 1 (best) BASIC14.18□□□□□ -0.14
TNFRSF1BP20333 BBS1-225ENST00000630659 1934 ntTSL 5 BASIC14.18□□□□□ -0.14
TNFRSF1BP20333 MSTO1-201ENST00000245564 2431 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
TNFRSF1BP20333 MED20-201ENST00000265350 2438 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
TNFRSF1BP20333 ROPN1L-201ENST00000274134 1066 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
TNFRSF1BP20333 CENPM-205ENST00000404067 905 ntTSL 3 BASIC14.18□□□□□ -0.14
TNFRSF1BP20333 CENPM-206ENST00000407253 818 ntTSL 2 BASIC14.18□□□□□ -0.14
TNFRSF1BP20333 UPF3AP3-201ENST00000420996 769 ntBASIC14.18□□□□□ -0.14
TNFRSF1BP20333 HHATL-AS1-201ENST00000423165 557 ntTSL 4 BASIC14.18□□□□□ -0.14
TNFRSF1BP20333 AL669970.3-201ENST00000435284 428 ntTSL 3 BASIC14.18□□□□□ -0.14
TNFRSF1BP20333 TMEM120A-203ENST00000439537 1161 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
TNFRSF1BP20333 LINC01143-201ENST00000449073 625 ntTSL 2 BASIC14.18□□□□□ -0.14
TNFRSF1BP20333 COMT-209ENST00000449653 1035 ntAPPRIS ALT2 TSL 1 (best) BASIC14.18□□□□□ -0.14
TNFRSF1BP20333 AC092910.3-202ENST00000469070 982 ntTSL 3 BASIC14.18□□□□□ -0.14
TNFRSF1BP20333 FAM92A-214ENST00000522324 1072 ntTSL 2 BASIC14.18□□□□□ -0.14
TNFRSF1BP20333 DHDH-204ENST00000523250 634 ntTSL 5 BASIC14.18□□□□□ -0.14
TNFRSF1BP20333 BEST1-205ENST00000526988 1263 ntTSL 2 BASIC14.18□□□□□ -0.14
TNFRSF1BP20333 FAM118B-206ENST00000529731 1028 ntTSL 5 BASIC14.18□□□□□ -0.14
TNFRSF1BP20333 AC116021.1-201ENST00000530049 653 ntTSL 3 BASIC14.18□□□□□ -0.14
TNFRSF1BP20333 AC051619.7-201ENST00000568314 623 ntBASIC14.18□□□□□ -0.14
TNFRSF1BP20333 PCDHGC3-204ENST00000617222 731 ntTSL 3 BASIC14.18□□□□□ -0.14
TNFRSF1BP20333 AC110491.3-201ENST00000631985 460 ntTSL 2 BASIC14.18□□□□□ -0.14
TNFRSF1BP20333 GSPT1-202ENST00000434724 7105 ntAPPRIS P4 TSL 1 (best) BASIC14.18□□□□□ -0.14
TNFRSF1BP20333 GFRA2-204ENST00000518077 1503 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
TNFRSF1BP20333 UNC13B-201ENST00000378495 6303 ntAPPRIS P3 TSL 1 (best) BASIC14.18□□□□□ -0.14
TNFRSF1BP20333 AC104452.1-203ENST00000636166 2266 ntAPPRIS P1 TSL 5 BASIC14.18□□□□□ -0.14
TNFRSF1BP20333 OSBPL5-202ENST00000348039 2798 ntTSL 2 BASIC14.18□□□□□ -0.14
TNFRSF1BP20333 PTPRN-201ENST00000295718 3784 ntAPPRIS P3 TSL 1 (best) BASIC14.18□□□□□ -0.14
TNFRSF1BP20333 CNOT3-201ENST00000221232 2852 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
TNFRSF1BP20333 PES1-204ENST00000402284 2144 ntTSL 5 BASIC14.18□□□□□ -0.14
TNFRSF1BP20333 NKIRAS1-203ENST00000415901 1644 ntAPPRIS ALT1 TSL 5 BASIC14.18□□□□□ -0.14
TNFRSF1BP20333 PDP1-203ENST00000517764 2140 ntAPPRIS P3 TSL 2 BASIC14.18□□□□□ -0.14
TNFRSF1BP20333 RIMS1-214ENST00000518273 4116 ntTSL 5 BASIC14.18□□□□□ -0.14
TNFRSF1BP20333 BCL2L2-PABPN1-203ENST00000557008 1366 ntAPPRIS P1 TSL 5 BASIC14.18□□□□□ -0.14
TNFRSF1BP20333 MAX-219ENST00000618858 2141 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
TNFRSF1BP20333 CSRNP2-201ENST00000228515 4471 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
TNFRSF1BP20333 IGDCC3-201ENST00000327987 4479 ntAPPRIS P2 TSL 1 (best) BASIC14.18□□□□□ -0.14
TNFRSF1BP20333 SLC11A2-204ENST00000541174 2470 ntAPPRIS P3 TSL 1 (best) BASIC14.18□□□□□ -0.14
TNFRSF1BP20333 PIGT-202ENST00000279036 2245 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
TNFRSF1BP20333 TTC7A-202ENST00000394850 4306 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
TNFRSF1BP20333 POLR2E-211ENST00000612655 1749 ntAPPRIS P1 TSL 3 BASIC14.18□□□□□ -0.14
TNFRSF1BP20333 SEMA4F-210ENST00000611975 6007 ntTSL 5 BASIC14.18□□□□□ -0.14
TNFRSF1BP20333 PLCB3-202ENST00000325234 3946 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
TNFRSF1BP20333 FOSL2-201ENST00000264716 6708 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
TNFRSF1BP20333 RAB1A-203ENST00000409784 2447 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
TNFRSF1BP20333 TCOF1-201ENST00000323668 4832 ntAPPRIS P3 TSL 1 (best) BASIC14.17□□□□□ -0.14
TNFRSF1BP20333 HSPA7-201ENST00000445535 1927 ntBASIC14.17□□□□□ -0.14
TNFRSF1BP20333 FAM47E-STBD1-204ENST00000515604 3029 ntAPPRIS P2 TSL 2 BASIC14.17□□□□□ -0.14
TNFRSF1BP20333 PDRG1-201ENST00000202017 1998 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
TNFRSF1BP20333 TOMM22P5-201ENST00000416399 439 ntBASIC14.17□□□□□ -0.14
TNFRSF1BP20333 TMEM191A-202ENST00000419950 663 ntTSL 3 BASIC14.17□□□□□ -0.14
TNFRSF1BP20333 AL589923.1-201ENST00000441473 316 ntTSL 5 BASIC14.17□□□□□ -0.14
TNFRSF1BP20333 AC096536.1-201ENST00000443284 440 ntTSL 2 BASIC14.17□□□□□ -0.14
TNFRSF1BP20333 C2orf88-205ENST00000443551 692 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
TNFRSF1BP20333 AC004865.2-202ENST00000444348 852 ntTSL 3 BASIC14.17□□□□□ -0.14
TNFRSF1BP20333 AC005020.2-201ENST00000455905 830 ntAPPRIS P1 TSL 3 BASIC14.17□□□□□ -0.14
TNFRSF1BP20333 RN7SL618P-201ENST00000477850 296 ntBASIC14.17□□□□□ -0.14
TNFRSF1BP20333 AC026191.1-201ENST00000491930 829 ntTSL 3 BASIC14.17□□□□□ -0.14
TNFRSF1BP20333 AC109322.1-201ENST00000524499 1264 ntBASIC14.17□□□□□ -0.14
TNFRSF1BP20333 AC069262.1-201ENST00000539058 672 ntBASIC14.17□□□□□ -0.14
TNFRSF1BP20333 CARHSP1-203ENST00000561530 729 ntAPPRIS P1 TSL 3 BASIC14.17□□□□□ -0.14
TNFRSF1BP20333 AC092718.3-202ENST00000564536 1032 ntAPPRIS P5 TSL 5 BASIC14.17□□□□□ -0.14
TNFRSF1BP20333 METTL23-203ENST00000586738 1059 ntTSL 5 BASIC14.17□□□□□ -0.14
TNFRSF1BP20333 METTL23-205ENST00000588302 925 ntTSL 5 BASIC14.17□□□□□ -0.14
TNFRSF1BP20333 AC010615.2-202ENST00000597444 832 ntTSL 3 BASIC14.17□□□□□ -0.14
TNFRSF1BP20333 AC074044.1-201ENST00000609673 707 ntBASIC14.17□□□□□ -0.14
TNFRSF1BP20333 AC244153.1-203ENST00000622796 419 ntTSL 2 BASIC14.17□□□□□ -0.14
TNFRSF1BP20333 SMTN-202ENST00000347557 3130 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
TNFRSF1BP20333 PAF1-201ENST00000221265 2066 ntAPPRIS P3 TSL 1 (best) BASIC14.17□□□□□ -0.14
TNFRSF1BP20333 DMAP1-203ENST00000372289 1730 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
TNFRSF1BP20333 RASA4-201ENST00000262940 5605 ntAPPRIS P3 TSL 1 (best) BASIC14.17□□□□□ -0.14
TNFRSF1BP20333 ABTB2-201ENST00000435224 4902 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
TNFRSF1BP20333 DNER-201ENST00000341772 3260 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
TNFRSF1BP20333 PRNP-201ENST00000379440 2657 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
TNFRSF1BP20333 COL11A2-202ENST00000361917 6104 ntAPPRIS ALT2 TSL 5 BASIC14.17□□□□□ -0.14
Retrieved 100 of 98,524 protein–RNA pairs in 66.1 ms