Protein–RNA interactions for Protein: P11586

MTHFD1, C-1-tetrahydrofolate synthase, cytoplasmic, humanhuman

Known RBP Predictions only

Length 935 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MTHFD1P11586 YPEL1-201ENST00000339468 4329 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
MTHFD1P11586 KRBOX4-202ENST00000344302 2774 ntAPPRIS ALT2 TSL 2 BASIC15.1■□□□□ 0.01
MTHFD1P11586 AC245052.4-201ENST00000452097 4158 ntTSL 2 BASIC15.1■□□□□ 0.01
MTHFD1P11586 ROPN1-203ENST00000459660 1909 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
MTHFD1P11586 FLJ42969-201ENST00000514926 1948 ntTSL 2 BASIC15.1■□□□□ 0.01
MTHFD1P11586 STIP1-201ENST00000305218 2196 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
MTHFD1P11586 GORAB-202ENST00000367763 2189 ntAPPRIS P1 TSL 2 BASIC15.1■□□□□ 0.01
MTHFD1P11586 SNX14-202ENST00000346348 3348 ntAPPRIS ALT2 TSL 1 (best) BASIC15.1■□□□□ 0.01
MTHFD1P11586 DDX19B-203ENST00000393657 1717 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
MTHFD1P11586 SGK3-211ENST00000522398 3106 ntAPPRIS P1 TSL 5 BASIC15.1■□□□□ 0.01
MTHFD1P11586 NDUFB7-201ENST00000215565 531 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
MTHFD1P11586 THOC7-201ENST00000295899 990 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
MTHFD1P11586 PDGFB-202ENST00000381551 1125 ntTSL 5 BASIC15.1■□□□□ 0.01
MTHFD1P11586 AC068898.1-201ENST00000440750 335 ntTSL 3 BASIC15.1■□□□□ 0.01
MTHFD1P11586 TIMM8B-201ENST00000504148 819 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
MTHFD1P11586 HAUS2-207ENST00000568846 709 ntTSL 3 BASIC15.1■□□□□ 0.01
MTHFD1P11586 FXYD6-216ENST00000584230 566 ntAPPRIS ALT1 TSL 3 BASIC15.1■□□□□ 0.01
MTHFD1P11586 SLC25A39-207ENST00000586016 1156 ntTSL 5 BASIC15.1■□□□□ 0.01
MTHFD1P11586 AC010319.3-201ENST00000597028 470 ntBASIC15.1■□□□□ 0.01
MTHFD1P11586 AC093813.1-201ENST00000605066 256 ntBASIC15.1■□□□□ 0.01
MTHFD1P11586 SPIN2A-203ENST00000614076 966 ntTSL 3 BASIC15.1■□□□□ 0.01
MTHFD1P11586 FOXRED1-201ENST00000263578 1970 ntAPPRIS P2 TSL 1 (best) BASIC15.1■□□□□ 0.01
MTHFD1P11586 ECHDC2-203ENST00000371522 1509 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
MTHFD1P11586 ZMIZ2-202ENST00000309315 5144 ntAPPRIS P4 TSL 2 BASIC15.1■□□□□ 0.01
MTHFD1P11586 AC013726.1-201ENST00000563747 2285 ntBASIC15.1■□□□□ 0.01
MTHFD1P11586 SNHG20-204ENST00000566583 1338 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
MTHFD1P11586 ZNF324-201ENST00000196482 3000 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
MTHFD1P11586 TOMM70-201ENST00000284320 4409 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
MTHFD1P11586 USP28-214ENST00000545540 3431 ntTSL 2 BASIC15.1■□□□□ 0.01
MTHFD1P11586 SLC9A7-205ENST00000616978 10024 ntAPPRIS ALT2 TSL 1 (best) BASIC15.1■□□□□ 0.01
MTHFD1P11586 LYSMD4-204ENST00000409796 2672 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
MTHFD1P11586 RABIF-201ENST00000367262 2430 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
MTHFD1P11586 PDE4A-203ENST00000380702 4781 ntAPPRIS P4 TSL 1 (best) BASIC15.09■□□□□ 0.01
MTHFD1P11586 MBD1-203ENST00000339998 2956 ntAPPRIS ALT2 TSL 1 (best) BASIC15.09■□□□□ 0.01
MTHFD1P11586 ITPKB-201ENST00000272117 5822 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
MTHFD1P11586 UBA6-AS1-201ENST00000498917 1445 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
MTHFD1P11586 TMEM237-202ENST00000409444 5592 ntAPPRIS ALT2 TSL 5 BASIC15.09■□□□□ 0.01
MTHFD1P11586 NUP93-201ENST00000308159 2741 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
MTHFD1P11586 RPS6KL1-201ENST00000354625 5195 ntAPPRIS P1 TSL 2 BASIC15.09■□□□□ 0.01
MTHFD1P11586 SUCO-210ENST00000616058 5495 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
MTHFD1P11586 MGMT-201ENST00000306010 1759 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
MTHFD1P11586 GPI-205ENST00000586425 1799 ntTSL 5 BASIC15.09■□□□□ 0.01
MTHFD1P11586 ZC2HC1C-202ENST00000439583 1509 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
MTHFD1P11586 E2F6-211ENST00000542100 3450 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
MTHFD1P11586 TMEM201-202ENST00000340381 3776 ntAPPRIS P1 TSL 5 BASIC15.09■□□□□ 0.01
MTHFD1P11586 PSD4-201ENST00000245796 5188 ntAPPRIS P2 TSL 1 (best) BASIC15.09■□□□□ 0.01
MTHFD1P11586 DNAJC5-201ENST00000360864 5213 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
MTHFD1P11586 C1orf68-201ENST00000368775 949 ntAPPRIS P1 BASIC15.09■□□□□ 0.01
MTHFD1P11586 RPL5P21-201ENST00000404620 815 ntBASIC15.09■□□□□ 0.01
MTHFD1P11586 ITPR1-AS1-201ENST00000412804 858 ntTSL 2 BASIC15.09■□□□□ 0.01
MTHFD1P11586 AL513303.2-201ENST00000413339 536 ntTSL 2 BASIC15.09■□□□□ 0.01
MTHFD1P11586 AL157832.1-201ENST00000428273 495 ntTSL 2 BASIC15.09■□□□□ 0.01
MTHFD1P11586 HEBP2-202ENST00000448741 661 ntTSL 5 BASIC15.09■□□□□ 0.01
MTHFD1P11586 AL513217.1-202ENST00000458139 600 ntTSL 3 BASIC15.09■□□□□ 0.01
MTHFD1P11586 PFN2-205ENST00000461868 613 ntTSL 2 BASIC15.09■□□□□ 0.01
MTHFD1P11586 NAA50-208ENST00000497255 789 ntTSL 5 BASIC15.09■□□□□ 0.01
MTHFD1P11586 LINC01336-201ENST00000503568 534 ntTSL 4 BASIC15.09■□□□□ 0.01
MTHFD1P11586 AC005544.2-201ENST00000579138 229 ntTSL 5 BASIC15.09■□□□□ 0.01
MTHFD1P11586 PIGL-212ENST00000581006 554 ntTSL 4 BASIC15.09■□□□□ 0.01
MTHFD1P11586 AC073389.2-202ENST00000607450 441 ntTSL 5 BASIC15.09■□□□□ 0.01
MTHFD1P11586 LINC01515-215ENST00000608678 854 ntTSL 5 BASIC15.09■□□□□ 0.01
MTHFD1P11586 AC004834.1-204ENST00000640670 1055 ntTSL 5 BASIC15.09■□□□□ 0.01
MTHFD1P11586 ZNF451-201ENST00000357489 4998 ntAPPRIS P3 TSL 1 (best) BASIC15.09■□□□□ 0.01
MTHFD1P11586 CALD1-222ENST00000495522 2199 ntTSL 5 BASIC15.09■□□□□ 0.01
MTHFD1P11586 HGNC:24955-201ENST00000303177 2452 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
MTHFD1P11586 MED29-204ENST00000599213 2490 ntAPPRIS ALT2 TSL 1 (best) BASIC15.09■□□□□ 0.01
MTHFD1P11586 EEPD1-205ENST00000534978 2769 ntAPPRIS P1 TSL 2 BASIC15.09■□□□□ 0.01
MTHFD1P11586 GATA3-202ENST00000379328 3078 ntAPPRIS ALT1 TSL 1 (best) BASIC15.09■□□□□ 0.01
MTHFD1P11586 ELFN2-207ENST00000613079 8360 ntAPPRIS P1 TSL 4 BASIC15.09■□□□□ 0.01
MTHFD1P11586 ARHGAP23-221ENST00000620417 3663 ntAPPRIS ALT2 TSL 5 BASIC15.09■□□□□ 0.01
MTHFD1P11586 SEMA5B-206ENST00000451055 4579 ntAPPRIS ALT2 TSL 2 BASIC15.09■□□□□ 0.01
MTHFD1P11586 CDH16-207ENST00000568632 2526 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
MTHFD1P11586 PPOX-201ENST00000352210 1686 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
MTHFD1P11586 KRT8P44-201ENST00000441609 1350 ntBASIC15.09■□□□□ 0.01
MTHFD1P11586 WDR20-203ENST00000335263 2616 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
MTHFD1P11586 SAFB-202ENST00000454510 2650 ntAPPRIS ALT2 TSL 2 BASIC15.09■□□□□ 0.01
MTHFD1P11586 ISPD-202ENST00000407010 5524 ntAPPRIS P1 TSL 5 BASIC15.09■□□□□ 0.01
MTHFD1P11586 ACTL7B-201ENST00000374667 2379 ntAPPRIS P1 BASIC15.09■□□□□ 0.01
MTHFD1P11586 RAD51-201ENST00000267868 2449 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0.01
MTHFD1P11586 GTF2IRD1-201ENST00000265755 3430 ntAPPRIS P3 TSL 1 (best) BASIC15.08■□□□□ 0.01
MTHFD1P11586 TM4SF4-201ENST00000305354 2101 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0.01
MTHFD1P11586 NUP62-212ENST00000597723 1824 ntTSL 1 (best) BASIC15.08■□□□□ 0.01
MTHFD1P11586 CACNA1G-205ENST00000360761 7497 ntAPPRIS ALT2 TSL 1 (best) BASIC15.08■□□□□ 0.01
MTHFD1P11586 ZBED1-201ENST00000381218 2832 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0.01
MTHFD1P11586 POLR2B-205ENST00000441246 3839 ntTSL 2 BASIC15.08■□□□□ 0.01
MTHFD1P11586 DSE-202ENST00000359564 4037 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
MTHFD1P11586 KCNT1-208ENST00000488444 3696 ntAPPRIS ALT2 TSL 5 BASIC15.08■□□□□ 0
MTHFD1P11586 TSC22D1-211ENST00000501704 4026 ntTSL 2 BASIC15.08■□□□□ 0
MTHFD1P11586 AC093525.2-201ENST00000564543 1944 ntAPPRIS P1 TSL 2 BASIC15.08■□□□□ 0
MTHFD1P11586 INPP5D-201ENST00000359570 5274 ntAPPRIS ALT2 TSL 1 (best) BASIC15.08■□□□□ 0
MTHFD1P11586 TNFRSF12A-202ENST00000341627 881 ntTSL 1 (best) BASIC15.08■□□□□ 0
MTHFD1P11586 PRKN-203ENST00000366894 1157 ntTSL 5 BASIC15.08■□□□□ 0
MTHFD1P11586 PPDPF-201ENST00000370177 627 ntTSL 2 BASIC15.08■□□□□ 0
MTHFD1P11586 TEX30-203ENST00000376022 828 ntTSL 2 BASIC15.08■□□□□ 0
MTHFD1P11586 KRTAP10-2-201ENST00000391621 1149 ntAPPRIS P1 BASIC15.08■□□□□ 0
MTHFD1P11586 AC105940.2-201ENST00000421055 380 ntTSL 3 BASIC15.08■□□□□ 0
MTHFD1P11586 AC095060.1-201ENST00000502455 549 ntTSL 4 BASIC15.08■□□□□ 0
MTHFD1P11586 MTX3-202ENST00000512528 1280 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
MTHFD1P11586 FUZ-207ENST00000526575 482 ntTSL 4 BASIC15.08■□□□□ 0
MTHFD1P11586 AC016727.1-204ENST00000578974 420 ntTSL 3 BASIC15.08■□□□□ 0
Retrieved 100 of 98,524 protein–RNA pairs in 41.3 ms