Protein–RNA interactions for Protein: P11387

TOP1, DNA topoisomerase 1, humanhuman

Known RBP Predictions only

Length 765 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TOP1P11387 KANK2-201ENST00000586659 5162 ntAPPRIS P3 TSL 1 (best) BASIC17.88■□□□□ 0.45
TOP1P11387 ERO1B-202ENST00000354619 4567 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
TOP1P11387 GEMIN7-201ENST00000270257 1657 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
TOP1P11387 NFU1-201ENST00000303698 1034 ntAPPRIS ALT2 TSL 1 (best) BASIC17.88■□□□□ 0.45
TOP1P11387 TSPAN32-204ENST00000381121 999 ntAPPRIS ALT2 TSL 5 BASIC17.88■□□□□ 0.45
TOP1P11387 CYB5R3-203ENST00000402438 1050 ntTSL 5 BASIC17.88■□□□□ 0.45
TOP1P11387 LSM5-207ENST00000410044 687 ntTSL 3 BASIC17.88■□□□□ 0.45
TOP1P11387 AC007405.2-202ENST00000418106 540 ntTSL 4 BASIC17.88■□□□□ 0.45
TOP1P11387 AL121983.1-201ENST00000424181 335 ntTSL 2 BASIC17.88■□□□□ 0.45
TOP1P11387 TMEM107-204ENST00000437139 747 ntAPPRIS ALT1 TSL 1 (best) BASIC17.88■□□□□ 0.45
TOP1P11387 CR769775.1-201ENST00000443347 931 ntTSL 3 BASIC17.88■□□□□ 0.45
TOP1P11387 KRT223P-202ENST00000449164 1292 ntBASIC17.88■□□□□ 0.45
TOP1P11387 BCL9L-202ENST00000526143 5514 ntTSL 5 BASIC17.88■□□□□ 0.45
TOP1P11387 KRT90P-201ENST00000549264 1064 ntBASIC17.88■□□□□ 0.45
TOP1P11387 HIRIP3-204ENST00000564026 988 ntTSL 2 BASIC17.88■□□□□ 0.45
TOP1P11387 IGHV3OR16-8-201ENST00000565407 349 ntAPPRIS P1 BASIC17.88■□□□□ 0.45
TOP1P11387 UPK1A-204ENST00000617999 1268 ntAPPRIS P1 TSL 5 BASIC17.88■□□□□ 0.45
TOP1P11387 MIR6752-201ENST00000618442 71 ntBASIC17.88■□□□□ 0.45
TOP1P11387 DUOX1-201ENST00000321429 5738 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
TOP1P11387 TC2N-206ENST00000556018 1770 ntTSL 2 BASIC17.88■□□□□ 0.45
TOP1P11387 SGCZ-201ENST00000382080 2234 ntAPPRIS P1 TSL 5 BASIC17.88■□□□□ 0.45
TOP1P11387 NANOS1-202ENST00000425699 4017 ntAPPRIS P2 BASIC17.88■□□□□ 0.45
TOP1P11387 FAM198B-203ENST00000585682 4900 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
TOP1P11387 MAP4K1-210ENST00000591517 2700 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
TOP1P11387 PRPSAP2-216ENST00000536323 1872 ntTSL 2 BASIC17.88■□□□□ 0.45
TOP1P11387 LAT2-202ENST00000344995 2363 ntAPPRIS P2 TSL 1 (best) BASIC17.88■□□□□ 0.45
TOP1P11387 ADCYAP1-203ENST00000579794 3346 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
TOP1P11387 SLITRK2-202ENST00000370490 7672 ntAPPRIS P1 BASIC17.88■□□□□ 0.45
TOP1P11387 PLD3-201ENST00000356508 1906 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
TOP1P11387 TTC6-206ENST00000553443 5833 ntAPPRIS P1 TSL 5 BASIC17.88■□□□□ 0.45
TOP1P11387 AC118344.1-201ENST00000378432 1462 ntTSL 2 BASIC17.88■□□□□ 0.45
TOP1P11387 PCYOX1-201ENST00000264441 2959 ntTSL 5 BASIC17.88■□□□□ 0.45
TOP1P11387 PPP1R21-201ENST00000281394 3137 ntTSL 1 (best) BASIC17.87■□□□□ 0.45
TOP1P11387 GLG1-202ENST00000422840 4748 ntAPPRIS ALT2 TSL 1 (best) BASIC17.87■□□□□ 0.45
TOP1P11387 KRTAP10-7-201ENST00000609664 1578 ntAPPRIS P1 BASIC17.87■□□□□ 0.45
TOP1P11387 DEGS1-201ENST00000323699 2101 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
TOP1P11387 UBL7-AS1-203ENST00000564621 1612 ntTSL 1 (best) BASIC17.87■□□□□ 0.45
TOP1P11387 CISH-202ENST00000443053 2167 ntTSL 1 (best) BASIC17.87■□□□□ 0.45
TOP1P11387 SLC35A3-221ENST00000640600 3341 ntTSL 5 BASIC17.87■□□□□ 0.45
TOP1P11387 ZNF563-201ENST00000293725 2754 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
TOP1P11387 LINC01185-202ENST00000452343 1705 ntTSL 2 BASIC17.87■□□□□ 0.45
TOP1P11387 TNIP1-219ENST00000524280 1716 ntTSL 1 (best) BASIC17.87■□□□□ 0.45
TOP1P11387 PPP2R5D-208ENST00000485511 3044 ntAPPRIS P3 TSL 1 (best) BASIC17.87■□□□□ 0.45
TOP1P11387 PPP3CB-201ENST00000342558 2418 ntTSL 5 BASIC17.87■□□□□ 0.45
TOP1P11387 TGFB1I1-202ENST00000394858 1803 ntAPPRIS P3 TSL 1 (best) BASIC17.87■□□□□ 0.45
TOP1P11387 SPAG11A-201ENST00000326558 612 ntTSL 1 (best) BASIC17.87■□□□□ 0.45
TOP1P11387 OR10H1-201ENST00000334920 1124 ntAPPRIS P1 BASIC17.87■□□□□ 0.45
TOP1P11387 GNG5-201ENST00000370641 920 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
TOP1P11387 PRAF2-201ENST00000376386 801 ntTSL 2 BASIC17.87■□□□□ 0.45
TOP1P11387 NDUFC1-201ENST00000394223 598 ntAPPRIS P1 TSL 3 BASIC17.87■□□□□ 0.45
TOP1P11387 CRYAA-202ENST00000398132 826 ntTSL 2 BASIC17.87■□□□□ 0.45
TOP1P11387 FAM221A-203ENST00000409653 761 ntTSL 5 BASIC17.87■□□□□ 0.45
TOP1P11387 FAM221A-204ENST00000409994 1136 ntTSL 1 (best) BASIC17.87■□□□□ 0.45
TOP1P11387 DICER1-AS1-202ENST00000439819 810 ntTSL 3 BASIC17.87■□□□□ 0.45
TOP1P11387 HOXC-AS3-201ENST00000509870 544 ntTSL 4 BASIC17.87■□□□□ 0.45
TOP1P11387 AC008011.2-201ENST00000538113 792 ntTSL 3 BASIC17.87■□□□□ 0.45
TOP1P11387 C19orf38-203ENST00000592854 1060 ntAPPRIS P1 TSL 5 BASIC17.87■□□□□ 0.45
TOP1P11387 AC132938.4-201ENST00000623835 848 ntBASIC17.87■□□□□ 0.45
TOP1P11387 FP236240.1-204ENST00000624932 712 ntTSL 2 BASIC17.87■□□□□ 0.45
TOP1P11387 LEKR1-209ENST00000491763 1940 ntTSL 1 (best) BASIC17.87■□□□□ 0.45
TOP1P11387 FYN-205ENST00000368682 3234 ntAPPRIS ALT1 TSL 5 BASIC17.87■□□□□ 0.45
TOP1P11387 SOWAHA-201ENST00000378693 3211 ntAPPRIS P1 BASIC17.87■□□□□ 0.45
TOP1P11387 MGEA5-201ENST00000357797 3263 ntTSL 1 (best) BASIC17.87■□□□□ 0.45
TOP1P11387 RTN1-209ENST00000611068 2647 ntTSL 5 BASIC17.87■□□□□ 0.45
TOP1P11387 TNXB-209ENST00000613214 6842 ntTSL 5 BASIC17.87■□□□□ 0.45
TOP1P11387 KIAA1211-201ENST00000264229 4109 ntAPPRIS P2 TSL 2 BASIC17.87■□□□□ 0.45
TOP1P11387 KRT8P44-201ENST00000441609 1350 ntBASIC17.87■□□□□ 0.45
TOP1P11387 VWA2-202ENST00000392982 2794 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
TOP1P11387 YY1AP1-211ENST00000368340 2927 ntAPPRIS ALT2 TSL 1 (best) BASIC17.87■□□□□ 0.45
TOP1P11387 DZIP1-204ENST00000376829 3738 ntAPPRIS P4 TSL 1 (best) BASIC17.87■□□□□ 0.45
TOP1P11387 PRR19-201ENST00000341747 1530 ntAPPRIS P2 TSL 5 BASIC17.87■□□□□ 0.45
TOP1P11387 SMYD3-214ENST00000490107 1548 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
TOP1P11387 HSD17B6-206ENST00000555159 1525 ntAPPRIS P1 TSL 5 BASIC17.87■□□□□ 0.45
TOP1P11387 LRRC59-203ENST00000576448 1531 ntBASIC17.87■□□□□ 0.45
TOP1P11387 TMEM127-201ENST00000258439 6266 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
TOP1P11387 GLB1L2-201ENST00000339772 3152 ntAPPRIS P1 TSL 5 BASIC17.87■□□□□ 0.45
TOP1P11387 LCOR-202ENST00000356016 4834 ntAPPRIS P3 TSL 2 BASIC17.87■□□□□ 0.45
TOP1P11387 DMTN-206ENST00000443491 2415 ntAPPRIS P1 TSL 5 BASIC17.87■□□□□ 0.45
TOP1P11387 OAS1-202ENST00000445409 1684 ntAPPRIS P3 TSL 1 (best) BASIC17.87■□□□□ 0.45
TOP1P11387 MARCKS-201ENST00000612661 4275 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
TOP1P11387 TOPAZ1-201ENST00000309765 5334 ntAPPRIS P1 TSL 5 BASIC17.86■□□□□ 0.45
TOP1P11387 AC138904.3-201ENST00000635780 2681 ntTSL 5 BASIC17.86■□□□□ 0.45
TOP1P11387 C11orf80-201ENST00000360962 1807 ntAPPRIS ALT2 TSL 5 BASIC17.86■□□□□ 0.45
TOP1P11387 ANKRD33-201ENST00000301190 1935 ntTSL 2 BASIC17.86■□□□□ 0.45
TOP1P11387 SLC25A27-201ENST00000371347 2963 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
TOP1P11387 SHH-201ENST00000297261 4454 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
TOP1P11387 FLT3LG-201ENST00000204637 1046 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
TOP1P11387 GUK1-206ENST00000366723 845 ntTSL 5 BASIC17.86■□□□□ 0.45
TOP1P11387 GABARAPL2-201ENST00000037243 1002 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
TOP1P11387 AL583835.2-202ENST00000421363 1104 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
TOP1P11387 CNN2P8-201ENST00000421872 913 ntBASIC17.86■□□□□ 0.45
TOP1P11387 HLA-K-203ENST00000430151 1046 ntBASIC17.86■□□□□ 0.45
TOP1P11387 KCNQ1-AS1-201ENST00000440887 1084 ntTSL 5 BASIC17.86■□□□□ 0.45
TOP1P11387 AC103563.7-201ENST00000448734 478 ntTSL 3 BASIC17.86■□□□□ 0.45
TOP1P11387 AL157834.2-201ENST00000451737 663 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
TOP1P11387 RNF216P1-213ENST00000494947 946 ntTSL 2 BASIC17.86■□□□□ 0.45
TOP1P11387 RPL8-205ENST00000527914 551 ntTSL 3 BASIC17.86■□□□□ 0.45
TOP1P11387 AP000808.2-201ENST00000542410 569 ntTSL 4 BASIC17.86■□□□□ 0.45
TOP1P11387 ACAP1-208ENST00000574499 412 ntTSL 2 BASIC17.86■□□□□ 0.45
TOP1P11387 NAA38-206ENST00000576384 424 ntTSL 2 BASIC17.86■□□□□ 0.45
Retrieved 100 of 98,524 protein–RNA pairs in 32 ms