Protein–RNA interactions for Protein: P09630

HOXC6, Homeobox protein Hox-C6, humanhuman

Predictions only

Length 235 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HOXC6P09630 AL137783.1-201ENST00000623494 1896 ntBASIC16.99■□□□□ 0.31
HOXC6P09630 PIK3R6-203ENST00000614407 2265 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
HOXC6P09630 RECK-201ENST00000377966 4888 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
HOXC6P09630 TMEM139-205ENST00000410004 2114 ntAPPRIS P1 TSL 2 BASIC16.99■□□□□ 0.31
HOXC6P09630 UGCG-201ENST00000374279 4007 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
HOXC6P09630 AL353608.3-201ENST00000603200 2211 ntTSL 5 BASIC16.99■□□□□ 0.31
HOXC6P09630 AL139384.1-201ENST00000612143 3047 ntBASIC16.99■□□□□ 0.31
HOXC6P09630 FIS1-201ENST00000223136 734 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
HOXC6P09630 AIMP2-202ENST00000395236 860 ntTSL 2 BASIC16.99■□□□□ 0.31
HOXC6P09630 AC007952.2-201ENST00000399091 1176 ntTSL 1 (best) BASIC16.99■□□□□ 0.31
HOXC6P09630 AC015689.1-201ENST00000525365 462 ntTSL 2 BASIC16.99■□□□□ 0.31
HOXC6P09630 AHNAK-205ENST00000530124 701 ntAPPRIS ALT2 TSL 3 BASIC16.99■□□□□ 0.31
HOXC6P09630 ERICH5-202ENST00000545282 596 ntAPPRIS ALT2 TSL 2 BASIC16.99■□□□□ 0.31
HOXC6P09630 AP000894.2-204ENST00000577358 473 ntTSL 5 BASIC16.99■□□□□ 0.31
HOXC6P09630 RPS15-202ENST00000585665 467 ntTSL 3 BASIC16.99■□□□□ 0.31
HOXC6P09630 TMEM205-216ENST00000593256 792 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
HOXC6P09630 ALPPL2-201ENST00000295453 2493 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
HOXC6P09630 MAPKAP1-202ENST00000350766 3256 ntTSL 1 (best) BASIC16.99■□□□□ 0.31
HOXC6P09630 LEKR1-209ENST00000491763 1940 ntTSL 1 (best) BASIC16.99■□□□□ 0.31
HOXC6P09630 DNAJC2-203ENST00000379263 2167 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
HOXC6P09630 ZNF423-206ENST00000563137 4911 ntAPPRIS ALT2 TSL 5 BASIC16.99■□□□□ 0.31
HOXC6P09630 WASHC2C-209ENST00000540872 4519 ntAPPRIS ALT2 TSL 1 (best) BASIC16.99■□□□□ 0.31
HOXC6P09630 CFAP36-201ENST00000339012 1373 ntTSL 1 (best) BASIC16.99■□□□□ 0.31
HOXC6P09630 MAP4K4-202ENST00000324219 7526 ntTSL 5 BASIC16.99■□□□□ 0.31
HOXC6P09630 HLA-DQB2-231ENST00000435145 2026 ntBASIC16.99■□□□□ 0.31
HOXC6P09630 LSM6-201ENST00000296581 2259 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
HOXC6P09630 IER2-203ENST00000588173 2934 ntAPPRIS P1 BASIC16.99■□□□□ 0.31
HOXC6P09630 AC009090.5-201ENST00000624886 2285 ntBASIC16.99■□□□□ 0.31
HOXC6P09630 ASAH1-221ENST00000636128 1608 ntTSL 5 BASIC16.99■□□□□ 0.31
HOXC6P09630 RALGDS-205ENST00000393160 3801 ntAPPRIS ALT2 TSL 1 (best) BASIC16.99■□□□□ 0.31
HOXC6P09630 LIMS1-202ENST00000338045 1876 ntTSL 1 (best) BASIC16.99■□□□□ 0.31
HOXC6P09630 CLEC18B-201ENST00000339953 1865 ntAPPRIS P2 TSL 1 (best) BASIC16.99■□□□□ 0.31
HOXC6P09630 CLEC18C-202ENST00000536907 1865 ntAPPRIS ALT2 TSL 5 BASIC16.99■□□□□ 0.31
HOXC6P09630 PITPNA-201ENST00000313486 3912 ntAPPRIS P2 TSL 5 BASIC16.99■□□□□ 0.31
HOXC6P09630 RELT-201ENST00000064780 3535 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
HOXC6P09630 PTPN5-201ENST00000358540 3135 ntTSL 1 (best) BASIC16.99■□□□□ 0.31
HOXC6P09630 NR2E3-202ENST00000617575 1998 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
HOXC6P09630 ATP2B1-AS1-201ENST00000605386 3632 ntBASIC16.98■□□□□ 0.31
HOXC6P09630 LGR6-205ENST00000439764 2487 ntTSL 1 (best) BASIC16.98■□□□□ 0.31
HOXC6P09630 PTPA-203ENST00000348141 2737 ntTSL 5 BASIC16.98■□□□□ 0.31
HOXC6P09630 PTPA-207ENST00000393370 2737 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
HOXC6P09630 TMEM106A-202ENST00000541594 1330 ntTSL 2 BASIC16.98■□□□□ 0.31
HOXC6P09630 AL008718.2-201ENST00000609206 1313 ntBASIC16.98■□□□□ 0.31
HOXC6P09630 TRMT10C-201ENST00000309922 1819 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
HOXC6P09630 TSSK2-201ENST00000399635 1816 ntAPPRIS P1 BASIC16.98■□□□□ 0.31
HOXC6P09630 NLE1-202ENST00000442241 2588 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
HOXC6P09630 TOMM40-207ENST00000592434 3415 ntAPPRIS ALT2 TSL 2 BASIC16.98■□□□□ 0.31
HOXC6P09630 SLC43A2-202ENST00000412517 1658 ntTSL 2 BASIC16.98■□□□□ 0.31
HOXC6P09630 AC244394.1-201ENST00000435000 1665 ntBASIC16.98■□□□□ 0.31
HOXC6P09630 TMPRSS4-214ENST00000523251 1689 ntAPPRIS ALT2 TSL 2 BASIC16.98■□□□□ 0.31
HOXC6P09630 TMC5-202ENST00000381414 4755 ntTSL 1 (best) BASIC16.98■□□□□ 0.31
HOXC6P09630 KIAA1614-AS1-201ENST00000415647 1440 ntTSL 2 BASIC16.98■□□□□ 0.31
HOXC6P09630 AGK-211ENST00000629555 2765 ntTSL 5 BASIC16.98■□□□□ 0.31
HOXC6P09630 WARS-232ENST00000556645 2508 ntTSL 5 BASIC16.98■□□□□ 0.31
HOXC6P09630 MYO1D-201ENST00000318217 5563 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
HOXC6P09630 LONRF3-203ENST00000422289 2898 ntTSL 2 BASIC16.98■□□□□ 0.31
HOXC6P09630 MYH14-202ENST00000376970 6787 ntAPPRIS ALT2 TSL 5 BASIC16.98■□□□□ 0.31
HOXC6P09630 KEAP1-201ENST00000171111 2955 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
HOXC6P09630 MRPS22-201ENST00000310776 1120 ntAPPRIS P2 TSL 1 (best) BASIC16.98■□□□□ 0.31
HOXC6P09630 TMEM14B-202ENST00000379542 975 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
HOXC6P09630 AC098935.1-201ENST00000446057 611 ntBASIC16.98■□□□□ 0.31
HOXC6P09630 AC073150.1-201ENST00000450406 1084 ntBASIC16.98■□□□□ 0.31
HOXC6P09630 NOC2LP1-201ENST00000450578 752 ntBASIC16.98■□□□□ 0.31
HOXC6P09630 AC093627.5-203ENST00000497320 746 ntTSL 2 BASIC16.98■□□□□ 0.31
HOXC6P09630 MANEAL-204ENST00000525897 1294 ntTSL 2 BASIC16.98■□□□□ 0.31
HOXC6P09630 AC009065.3-201ENST00000562027 627 ntTSL 5 BASIC16.98■□□□□ 0.31
HOXC6P09630 SAXO2-207ENST00000566861 404 ntAPPRIS ALT2 TSL 2 BASIC16.98■□□□□ 0.31
HOXC6P09630 AC011491.1-203ENST00000637688 543 ntBASIC16.98■□□□□ 0.31
HOXC6P09630 KDM4B-203ENST00000536461 5027 ntTSL 1 (best) BASIC16.98■□□□□ 0.31
HOXC6P09630 AC020910.5-201ENST00000623668 1865 ntBASIC16.98■□□□□ 0.31
HOXC6P09630 SEMA5B-202ENST00000357599 4792 ntAPPRIS P3 TSL 1 (best) BASIC16.98■□□□□ 0.31
HOXC6P09630 KATNA1-203ENST00000367411 1984 ntAPPRIS P1 TSL 2 BASIC16.98■□□□□ 0.31
HOXC6P09630 TMEM65-201ENST00000297632 9029 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
HOXC6P09630 DNAJC22-201ENST00000395069 2059 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
HOXC6P09630 KHK-202ENST00000260599 2411 ntAPPRIS ALT1 TSL 1 (best) BASIC16.98■□□□□ 0.31
HOXC6P09630 AC008741.2-201ENST00000612792 3115 ntBASIC16.98■□□□□ 0.31
HOXC6P09630 NFE2-203ENST00000540264 1833 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
HOXC6P09630 FBLN1-202ENST00000327858 2896 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
HOXC6P09630 TRIM39-201ENST00000376656 3338 ntAPPRIS P4 TSL 2 BASIC16.98■□□□□ 0.31
HOXC6P09630 UBE2D1-204ENST00000615793 2621 ntTSL 2 BASIC16.98■□□□□ 0.31
HOXC6P09630 PIGP-207ENST00000464265 3437 ntTSL 1 (best) BASIC16.98■□□□□ 0.31
HOXC6P09630 KCTD20-202ENST00000373731 5619 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
HOXC6P09630 CDKN2AIP-203ENST00000504169 2721 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
HOXC6P09630 ASB10-204ENST00000420175 1694 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
HOXC6P09630 SLC35G5-201ENST00000382435 1321 ntAPPRIS P1 BASIC16.97■□□□□ 0.31
HOXC6P09630 CTSW-204ENST00000528419 1341 ntTSL 2 BASIC16.97■□□□□ 0.31
HOXC6P09630 ZNF799-201ENST00000419318 3036 ntTSL 2 BASIC16.97■□□□□ 0.31
HOXC6P09630 CDPF1-203ENST00000404583 1439 ntAPPRIS ALT1 TSL 2 BASIC16.97■□□□□ 0.31
HOXC6P09630 RAB22A-201ENST00000244040 8670 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
HOXC6P09630 ADD1-201ENST00000264758 4045 ntAPPRIS P3 TSL 5 BASIC16.97■□□□□ 0.31
HOXC6P09630 KRT17-201ENST00000311208 1524 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
HOXC6P09630 CD8A-201ENST00000283635 2873 ntAPPRIS P4 TSL 1 (best) BASIC16.97■□□□□ 0.31
HOXC6P09630 ZFP3-201ENST00000318833 5206 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
HOXC6P09630 AC097376.2-201ENST00000608661 2510 ntTSL 5 BASIC16.97■□□□□ 0.31
HOXC6P09630 SYT15-202ENST00000374323 6428 ntTSL 2 BASIC16.97■□□□□ 0.31
HOXC6P09630 MAP2K3-201ENST00000316920 1246 ntTSL 5 BASIC16.97■□□□□ 0.31
HOXC6P09630 FCRLB-201ENST00000336830 1193 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
HOXC6P09630 IL27-201ENST00000356897 1044 ntAPPRIS P2 TSL 1 (best) BASIC16.97■□□□□ 0.31
HOXC6P09630 FCRLB-202ENST00000367944 1172 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
HOXC6P09630 FCRLB-203ENST00000367945 1131 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
Retrieved 100 of 98,524 protein–RNA pairs in 33 ms