Protein–RNA interactions for Protein: P08253

MMP2, 72 kDa type IV collagenase, humanhuman

Predictions only

Length 660 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MMP2P08253 LMBR1-202ENST00000359422 4727 ntTSL 5 BASIC15.25■□□□□ 0.03
MMP2P08253 MAP2K5-201ENST00000178640 2347 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
MMP2P08253 RAB41-201ENST00000276066 1071 ntAPPRIS P2 TSL 1 (best) BASIC15.25■□□□□ 0.03
MMP2P08253 GABARAPL2-201ENST00000037243 1002 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
MMP2P08253 RAB41-202ENST00000374473 1074 ntAPPRIS ALT2 TSL 5 BASIC15.25■□□□□ 0.03
MMP2P08253 POM121L8P-201ENST00000417732 1281 ntBASIC15.25■□□□□ 0.03
MMP2P08253 HOXB-AS1-201ENST00000435312 806 ntTSL 5 BASIC15.25■□□□□ 0.03
MMP2P08253 TMEM107-204ENST00000437139 747 ntAPPRIS ALT1 TSL 1 (best) BASIC15.25■□□□□ 0.03
MMP2P08253 C14orf178-202ENST00000439131 632 ntAPPRIS ALT2 TSL 1 (best) BASIC15.25■□□□□ 0.03
MMP2P08253 POM121L9P-203ENST00000441984 1285 ntBASIC15.25■□□□□ 0.03
MMP2P08253 AL353747.3-201ENST00000454185 579 ntTSL 3 BASIC15.25■□□□□ 0.03
MMP2P08253 FO681548.1-201ENST00000455617 1132 ntBASIC15.25■□□□□ 0.03
MMP2P08253 FLT3LG-205ENST00000596435 1034 ntTSL 5 BASIC15.25■□□□□ 0.03
MMP2P08253 CCL5-202ENST00000605140 1244 ntAPPRIS P1 TSL 5 BASIC15.25■□□□□ 0.03
MMP2P08253 SLC9A3-AS1-206ENST00000607005 435 ntTSL 3 BASIC15.25■□□□□ 0.03
MMP2P08253 ARID1B-222ENST00000637003 1290 ntTSL 5 BASIC15.25■□□□□ 0.03
MMP2P08253 SCP2-217ENST00000640998 1101 ntTSL 5 BASIC15.25■□□□□ 0.03
MMP2P08253 TGM6-201ENST00000202625 2292 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
MMP2P08253 PLCB1-203ENST00000378641 7323 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
MMP2P08253 VWA2-202ENST00000392982 2794 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
MMP2P08253 AC008969.1-201ENST00000550135 6438 ntTSL 2 BASIC15.25■□□□□ 0.03
MMP2P08253 ZCCHC17-202ENST00000373714 1730 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
MMP2P08253 SEMA5B-211ENST00000616742 4933 ntAPPRIS P3 TSL 5 BASIC15.25■□□□□ 0.03
MMP2P08253 RPP40-202ENST00000380051 1483 ntAPPRIS P1 TSL 5 BASIC15.25■□□□□ 0.03
MMP2P08253 PLEKHB2-207ENST00000438882 1460 ntTSL 2 BASIC15.25■□□□□ 0.03
MMP2P08253 GNAL-202ENST00000334049 6535 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
MMP2P08253 SCAF11-204ENST00000395454 1931 ntAPPRIS ALT2 TSL 1 (best) BASIC15.25■□□□□ 0.03
MMP2P08253 RABGAP1L-201ENST00000251507 2899 ntAPPRIS P1 TSL 2 BASIC15.25■□□□□ 0.03
MMP2P08253 FOS-202ENST00000535987 1402 ntTSL 2 BASIC15.25■□□□□ 0.03
MMP2P08253 MEX3A-202ENST00000532414 6124 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
MMP2P08253 SEC24D-202ENST00000419654 2786 ntTSL 5 BASIC15.24■□□□□ 0.03
MMP2P08253 DHPS-201ENST00000210060 1363 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
MMP2P08253 AC018665.1-201ENST00000622927 1362 ntBASIC15.24■□□□□ 0.03
MMP2P08253 SLIT1-204ENST00000371070 4564 ntTSL 5 BASIC15.24■□□□□ 0.03
MMP2P08253 SPAG1-202ENST00000388798 3852 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
MMP2P08253 TAF6-201ENST00000344095 2727 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
MMP2P08253 ARHGAP27P1-BPTFP1-KPNA2P3-201ENST00000578492 2732 ntTSL 2 BASIC15.24■□□□□ 0.03
MMP2P08253 BCAT2-201ENST00000316273 1552 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
MMP2P08253 TMPO-203ENST00000343315 2465 ntTSL 5 BASIC15.24■□□□□ 0.03
MMP2P08253 CMTM3-203ENST00000460097 1797 ntTSL 2 BASIC15.24■□□□□ 0.03
MMP2P08253 EFHC1-212ENST00000635984 3293 ntTSL 5 BASIC15.24■□□□□ 0.03
MMP2P08253 ENDOU-203ENST00000545824 1513 ntTSL 2 BASIC15.24■□□□□ 0.03
MMP2P08253 SENP6-205ENST00000447266 6501 ntAPPRIS ALT2 TSL 1 (best) BASIC15.24■□□□□ 0.03
MMP2P08253 PARP10-201ENST00000313028 3497 ntAPPRIS P3 TSL 1 (best) BASIC15.24■□□□□ 0.03
MMP2P08253 POM121C-206ENST00000607367 3690 ntAPPRIS ALT2 TSL 5 BASIC15.24■□□□□ 0.03
MMP2P08253 MFSD14B-201ENST00000375344 3420 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
MMP2P08253 GPER1-201ENST00000297469 2778 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
MMP2P08253 PLIN1-201ENST00000300055 2953 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
MMP2P08253 MRGPRF-202ENST00000320913 705 ntTSL 2 BASIC15.24■□□□□ 0.03
MMP2P08253 ZNRD1-201ENST00000332435 864 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
MMP2P08253 AL354714.1-201ENST00000356006 2136 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
MMP2P08253 NTRK3-203ENST00000357724 2980 ntTSL 5 BASIC15.24■□□□□ 0.03
MMP2P08253 PGF-202ENST00000405431 666 ntTSL 5 BASIC15.24■□□□□ 0.03
MMP2P08253 RPUSD3-204ENST00000424438 1005 ntTSL 2 BASIC15.24■□□□□ 0.03
MMP2P08253 AC139149.1-202ENST00000442532 783 ntTSL 3 BASIC15.24■□□□□ 0.03
MMP2P08253 AL355864.2-201ENST00000447420 863 ntBASIC15.24■□□□□ 0.03
MMP2P08253 AC005865.1-202ENST00000543036 641 ntTSL 2 BASIC15.24■□□□□ 0.03
MMP2P08253 C12orf10-204ENST00000548632 988 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
MMP2P08253 MRPL52-211ENST00000555536 451 ntTSL 3 BASIC15.24■□□□□ 0.03
MMP2P08253 HIRIP3-204ENST00000564026 988 ntTSL 2 BASIC15.24■□□□□ 0.03
MMP2P08253 AP000439.4-201ENST00000567742 664 ntTSL 3 BASIC15.24■□□□□ 0.03
MMP2P08253 AC025279.2-201ENST00000569730 653 ntBASIC15.24■□□□□ 0.03
MMP2P08253 PIGL-212ENST00000581006 554 ntTSL 4 BASIC15.24■□□□□ 0.03
MMP2P08253 C17orf62-239ENST00000585080 741 ntAPPRIS P1 TSL 5 BASIC15.24■□□□□ 0.03
MMP2P08253 MALAT1-211ENST00000617791 394 ntTSL 5 BASIC15.24■□□□□ 0.03
MMP2P08253 PURB-201ENST00000395699 9069 ntAPPRIS P1 BASIC15.24■□□□□ 0.03
MMP2P08253 CHRNB2-201ENST00000368476 5867 ntAPPRIS P2 TSL 1 (best) BASIC15.24■□□□□ 0.03
MMP2P08253 SLC29A1-204ENST00000371731 2258 ntAPPRIS P1 TSL 5 BASIC15.24■□□□□ 0.03
MMP2P08253 ATP6AP2-211ENST00000636196 1403 ntAPPRIS ALT2 TSL 5 BASIC15.24■□□□□ 0.03
MMP2P08253 GLIPR1L2-204ENST00000550916 2609 ntAPPRIS ALT2 TSL 1 (best) BASIC15.24■□□□□ 0.03
MMP2P08253 SLC26A11-203ENST00000546047 2807 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
MMP2P08253 ZNF746-201ENST00000340622 3806 ntAPPRIS P3 TSL 1 (best) BASIC15.24■□□□□ 0.03
MMP2P08253 ARMC5-203ENST00000457010 4844 ntAPPRIS P3 TSL 1 (best) BASIC15.24■□□□□ 0.03
MMP2P08253 TLL1-204ENST00000507499 4818 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
MMP2P08253 CSNK1A1-202ENST00000377843 2559 ntAPPRIS ALT1 TSL 1 (best) BASIC15.24■□□□□ 0.03
MMP2P08253 FRMPD4-201ENST00000380682 8465 ntAPPRIS P2 TSL 1 (best) BASIC15.24■□□□□ 0.03
MMP2P08253 MED16-203ENST00000325464 2922 ntAPPRIS P2 TSL 5 BASIC15.23■□□□□ 0.03
MMP2P08253 TMEM209-202ENST00000462753 2322 ntAPPRIS ALT1 TSL 5 BASIC15.23■□□□□ 0.03
MMP2P08253 KIAA0319L-201ENST00000325722 4789 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
MMP2P08253 TMEM30A-201ENST00000230461 4594 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
MMP2P08253 CKMT2-201ENST00000254035 1512 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
MMP2P08253 MAP3K10-201ENST00000253055 3436 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
MMP2P08253 CTSW-201ENST00000307886 1300 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
MMP2P08253 ARFIP1-202ENST00000356064 1302 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
MMP2P08253 TBCD-202ENST00000539345 3975 ntTSL 5 BASIC15.23■□□□□ 0.03
MMP2P08253 DDHD1-202ENST00000357758 5603 ntAPPRIS P3 TSL 1 (best) BASIC15.23■□□□□ 0.03
MMP2P08253 ACHE-202ENST00000302913 2956 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
MMP2P08253 ZNF18-201ENST00000322748 2767 ntAPPRIS P3 TSL 2 BASIC15.23■□□□□ 0.03
MMP2P08253 PRSS54-201ENST00000219301 1810 ntAPPRIS P1 TSL 5 BASIC15.23■□□□□ 0.03
MMP2P08253 SMYD1-203ENST00000444564 1816 ntTSL 5 BASIC15.23■□□□□ 0.03
MMP2P08253 VSIG10-202ENST00000359236 4946 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
MMP2P08253 NDUFB7-201ENST00000215565 531 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
MMP2P08253 CYTL1-201ENST00000307746 1003 ntAPPRIS P2 TSL 1 (best) BASIC15.23■□□□□ 0.03
MMP2P08253 VCX3B-202ENST00000381032 1171 ntAPPRIS P2 TSL 5 BASIC15.23■□□□□ 0.03
MMP2P08253 MXI1-205ENST00000393134 889 ntTSL 2 BASIC15.23■□□□□ 0.03
MMP2P08253 AC020915.1-202ENST00000427361 922 ntAPPRIS ALT2 TSL 2 BASIC15.23■□□□□ 0.03
MMP2P08253 SIRPB2-203ENST00000444444 884 ntTSL 2 BASIC15.23■□□□□ 0.03
MMP2P08253 FTH1P14-201ENST00000482930 551 ntBASIC15.23■□□□□ 0.03
MMP2P08253 GS1-24F4.2-201ENST00000500823 1110 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
MMP2P08253 CD4-210ENST00000541982 1187 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
Retrieved 100 of 98,524 protein–RNA pairs in 55.8 ms