Protein–RNA interactions for Protein: P07339

CTSD, Cathepsin D, humanhuman

Predicted RBP Predictions only

Length 412 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CTSDP07339 AC091812.2-201ENST00000619081 385 ntBASIC12.69□□□□□ -0.38
CTSDP07339 TBC1D16-209ENST00000576768 6342 ntTSL 1 (best) BASIC12.69□□□□□ -0.38
CTSDP07339 MAP3K4-204ENST00000392142 5490 ntAPPRIS P4 TSL 1 (best) BASIC12.69□□□□□ -0.38
CTSDP07339 NDUFC2-201ENST00000281031 2518 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
CTSDP07339 AKNA-204ENST00000374075 5038 ntAPPRIS ALT2 TSL 1 (best) BASIC12.69□□□□□ -0.38
CTSDP07339 ARAP1-203ENST00000393605 4778 ntAPPRIS ALT2 TSL 1 (best) BASIC12.69□□□□□ -0.38
CTSDP07339 NKIRAS1-203ENST00000415901 1644 ntAPPRIS ALT1 TSL 5 BASIC12.69□□□□□ -0.38
CTSDP07339 ATP8B3-201ENST00000310127 5095 ntAPPRIS P3 TSL 1 (best) BASIC12.69□□□□□ -0.38
CTSDP07339 ZMYND15-201ENST00000269289 2448 ntTSL 5 BASIC12.69□□□□□ -0.38
CTSDP07339 AC008894.2-201ENST00000597983 2987 ntTSL 2 BASIC12.69□□□□□ -0.38
CTSDP07339 TPM3-205ENST00000328159 1771 ntTSL 2 BASIC12.69□□□□□ -0.38
CTSDP07339 ADCYAP1R1-204ENST00000409489 1761 ntTSL 5 BASIC12.69□□□□□ -0.38
CTSDP07339 SLC12A7-201ENST00000264930 5280 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
CTSDP07339 SLC19A2-201ENST00000236137 3671 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
CTSDP07339 PROSER3-202ENST00000396908 2149 ntAPPRIS P5 TSL 1 (best) BASIC12.68□□□□□ -0.38
CTSDP07339 PLTP-201ENST00000354050 1731 ntTSL 1 (best) BASIC12.68□□□□□ -0.38
CTSDP07339 KIAA0319-203ENST00000535378 6896 ntAPPRIS ALT2 TSL 2 BASIC12.68□□□□□ -0.38
CTSDP07339 PSMD5-203ENST00000373904 1538 ntTSL 2 BASIC12.68□□□□□ -0.38
CTSDP07339 SEMA3F-202ENST00000413852 3212 ntTSL 1 (best) BASIC12.68□□□□□ -0.38
CTSDP07339 TRNT1-201ENST00000251607 2276 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
CTSDP07339 HSDL2-202ENST00000398805 3350 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
CTSDP07339 CLEC16A-202ENST00000409552 3365 ntTSL 1 (best) BASIC12.68□□□□□ -0.38
CTSDP07339 MARK3-205ENST00000429436 3371 ntAPPRIS ALT1 TSL 1 (best) BASIC12.68□□□□□ -0.38
CTSDP07339 PYCR2-201ENST00000343818 1689 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
CTSDP07339 ARRDC4-201ENST00000268042 4072 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
CTSDP07339 C7orf49-201ENST00000393114 1482 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
CTSDP07339 AC104758.3-201ENST00000563349 1453 ntTSL 1 (best) BASIC12.68□□□□□ -0.38
CTSDP07339 AC087521.1-201ENST00000501541 2045 ntTSL 2 BASIC12.68□□□□□ -0.38
CTSDP07339 SNX14-203ENST00000369627 3111 ntTSL 1 (best) BASIC12.68□□□□□ -0.38
CTSDP07339 FOXP3-203ENST00000376207 2382 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
CTSDP07339 MAGEA9-201ENST00000243314 1814 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
CTSDP07339 ZBTB14-202ENST00000400143 1814 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
CTSDP07339 SPAG7-201ENST00000206020 1058 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
CTSDP07339 PAGE5-201ENST00000289619 741 ntAPPRIS P3 TSL 1 (best) BASIC12.68□□□□□ -0.38
CTSDP07339 TMEM270-201ENST00000320531 854 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
CTSDP07339 BRCC3-202ENST00000340647 1101 ntAPPRIS P2 TSL 2 BASIC12.68□□□□□ -0.38
CTSDP07339 LCE1B-201ENST00000360090 1139 ntAPPRIS P1 BASIC12.68□□□□□ -0.38
CTSDP07339 SH3TC1-202ENST00000382521 829 ntTSL 1 (best) BASIC12.68□□□□□ -0.38
CTSDP07339 MAPK15-202ENST00000395107 834 ntTSL 1 (best) BASIC12.68□□□□□ -0.38
CTSDP07339 YWHAZ-204ENST00000395953 994 ntAPPRIS P1 TSL 5 BASIC12.68□□□□□ -0.38
CTSDP07339 CCNL2-202ENST00000408918 1186 ntTSL 1 (best) BASIC12.68□□□□□ -0.38
CTSDP07339 AFG3L1P-210ENST00000431757 569 ntTSL 4 BASIC12.68□□□□□ -0.38
CTSDP07339 PTK7-212ENST00000476760 902 ntTSL 2 BASIC12.68□□□□□ -0.38
CTSDP07339 AC079140.1-201ENST00000508039 487 ntBASIC12.68□□□□□ -0.38
CTSDP07339 RNA5SP416-201ENST00000516838 111 ntBASIC12.68□□□□□ -0.38
CTSDP07339 LINC01485-205ENST00000523617 586 ntTSL 2 BASIC12.68□□□□□ -0.38
CTSDP07339 ATP6V0A2-207ENST00000544833 1013 ntTSL 2 BASIC12.68□□□□□ -0.38
CTSDP07339 NDUFA4L2-206ENST00000556732 883 ntTSL 3 BASIC12.68□□□□□ -0.38
CTSDP07339 RPS15A-205ENST00000565420 802 ntAPPRIS P1 TSL 2 BASIC12.68□□□□□ -0.38
CTSDP07339 AC105021.1-202ENST00000570572 669 ntBASIC12.68□□□□□ -0.38
CTSDP07339 AC140113.2-201ENST00000604370 208 ntBASIC12.68□□□□□ -0.38
CTSDP07339 HAUS2-211ENST00000639412 375 ntTSL 2 BASIC12.68□□□□□ -0.38
CTSDP07339 AC084121.4-201ENST00000641598 221 ntBASIC12.68□□□□□ -0.38
CTSDP07339 AF228730.8-201ENST00000642140 221 ntBASIC12.68□□□□□ -0.38
CTSDP07339 AC006262.1-203ENST00000598170 1634 ntTSL 1 (best) BASIC12.68□□□□□ -0.38
CTSDP07339 NDNF-201ENST00000379692 2885 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
CTSDP07339 WSCD1-202ENST00000539421 2665 ntAPPRIS P1 TSL 5 BASIC12.68□□□□□ -0.38
CTSDP07339 ECHDC1-220ENST00000528402 1449 ntTSL 1 (best) BASIC12.68□□□□□ -0.38
CTSDP07339 MGMT-201ENST00000306010 1759 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
CTSDP07339 LRIG3-201ENST00000320743 4070 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
CTSDP07339 AC023090.2-201ENST00000625182 2110 ntBASIC12.68□□□□□ -0.38
CTSDP07339 ADAMTS7P1-201ENST00000613213 4793 ntBASIC12.68□□□□□ -0.38
CTSDP07339 WBP4-201ENST00000379487 2623 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
CTSDP07339 JADE2-203ENST00000395003 6465 ntTSL 1 (best) BASIC12.68□□□□□ -0.38
CTSDP07339 CDH16-209ENST00000570262 2604 ntTSL 5 BASIC12.68□□□□□ -0.38
CTSDP07339 DLGAP1-204ENST00000400149 5203 ntTSL 5 BASIC12.68□□□□□ -0.38
CTSDP07339 STARD8-201ENST00000252336 4862 ntAPPRIS P3 TSL 1 (best) BASIC12.68□□□□□ -0.38
CTSDP07339 OPN4-202ENST00000372071 2401 ntTSL 1 (best) BASIC12.68□□□□□ -0.38
CTSDP07339 CDYL2-203ENST00000562812 2086 ntAPPRIS ALT2 TSL 5 BASIC12.68□□□□□ -0.38
CTSDP07339 CDYL2-204ENST00000563890 2086 ntAPPRIS ALT2 TSL 5 BASIC12.68□□□□□ -0.38
CTSDP07339 CDYL2-205ENST00000566173 2086 ntAPPRIS ALT2 TSL 5 BASIC12.68□□□□□ -0.38
CTSDP07339 NR1H3-221ENST00000481889 1704 ntTSL 5 BASIC12.68□□□□□ -0.38
CTSDP07339 SNX20-202ENST00000330943 2904 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
CTSDP07339 CLK4-201ENST00000316308 2568 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
CTSDP07339 RTP1-201ENST00000312295 2217 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
CTSDP07339 ATG5-201ENST00000343245 3092 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
CTSDP07339 HIST3H2BB-201ENST00000620438 2364 ntAPPRIS P1 BASIC12.67□□□□□ -0.38
CTSDP07339 SLC22A6-204ENST00000458333 1521 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
CTSDP07339 CLCNKB-204ENST00000619181 1544 ntTSL 5 BASIC12.67□□□□□ -0.38
CTSDP07339 AL589669.1-201ENST00000639829 1506 ntTSL 5 BASIC12.67□□□□□ -0.38
CTSDP07339 PRNP-203ENST00000430350 2539 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
CTSDP07339 RUNX1T1-251ENST00000615601 7372 ntAPPRIS ALT1 TSL 5 BASIC12.67□□□□□ -0.38
CTSDP07339 PAAF1-205ENST00000535604 1695 ntTSL 5 BASIC12.67□□□□□ -0.38
CTSDP07339 RSPO3-201ENST00000356698 2697 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
CTSDP07339 TP53I11-201ENST00000308212 3683 ntAPPRIS P1 TSL 5 BASIC12.67□□□□□ -0.38
CTSDP07339 FGFR1-202ENST00000335922 4157 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
CTSDP07339 APC2-201ENST00000233607 10151 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
CTSDP07339 CORO7-222ENST00000574025 2826 ntTSL 2 BASIC12.67□□□□□ -0.38
CTSDP07339 SAR1A-204ENST00000373241 2996 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
CTSDP07339 RBPMS-202ENST00000320203 3110 ntAPPRIS P3 TSL 1 (best) BASIC12.67□□□□□ -0.38
CTSDP07339 CREB3L4-202ENST00000368600 1496 ntAPPRIS ALT2 TSL 1 (best) BASIC12.67□□□□□ -0.38
CTSDP07339 FBXO22-202ENST00000453211 1486 ntTSL 2 BASIC12.67□□□□□ -0.38
CTSDP07339 TDP2-201ENST00000341060 2120 ntAPPRIS ALT2 TSL 1 (best) BASIC12.67□□□□□ -0.38
CTSDP07339 KIAA1257-204ENST00000511438 2408 ntAPPRIS ALT2 TSL 2 BASIC12.67□□□□□ -0.38
CTSDP07339 ZNF133-203ENST00000377671 2701 ntAPPRIS P3 TSL 1 (best) BASIC12.67□□□□□ -0.38
CTSDP07339 PF4-201ENST00000296029 604 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
CTSDP07339 OR5C1-201ENST00000373680 963 ntAPPRIS P1 BASIC12.67□□□□□ -0.38
CTSDP07339 AMACR-204ENST00000382085 1195 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
CTSDP07339 STPG3-201ENST00000388931 1207 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
CTSDP07339 IGHV3-23-201ENST00000390609 432 ntAPPRIS P1 BASIC12.67□□□□□ -0.38
Retrieved 100 of 98,524 protein–RNA pairs in 37.3 ms