Protein–RNA interactions for Protein: P02708

CHRNA1, Acetylcholine receptor subunit alpha, humanhuman

Predictions only

Length 482 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHRNA1P02708 AC112693.3-201ENST00000624819 1983 ntBASIC16.37■□□□□ 0.21
CHRNA1P02708 PIGT-202ENST00000279036 2245 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
CHRNA1P02708 CCT6A-201ENST00000275603 2719 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
CHRNA1P02708 PLA1A-205ENST00000494440 1775 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
CHRNA1P02708 CRLF2-201ENST00000381566 1545 ntAPPRIS P1 TSL 5 BASIC16.37■□□□□ 0.21
CHRNA1P02708 NFIX-208ENST00000587260 1537 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
CHRNA1P02708 NAGK-201ENST00000244204 1154 ntAPPRIS P5 TSL 1 (best) BASIC16.37■□□□□ 0.21
CHRNA1P02708 RPP40-201ENST00000319533 1088 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
CHRNA1P02708 RBM38-204ENST00000371219 760 ntTSL 2 BASIC16.37■□□□□ 0.21
CHRNA1P02708 GAD1-203ENST00000375272 1252 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
CHRNA1P02708 C6orf136-202ENST00000376471 614 ntTSL 3 BASIC16.37■□□□□ 0.21
CHRNA1P02708 IGHV3-13-201ENST00000390602 430 ntAPPRIS P1 BASIC16.37■□□□□ 0.21
CHRNA1P02708 GSTK1-202ENST00000409500 888 ntTSL 2 BASIC16.37■□□□□ 0.21
CHRNA1P02708 VDAC1P1-201ENST00000439229 848 ntBASIC16.37■□□□□ 0.21
CHRNA1P02708 AL139010.1-202ENST00000452528 1041 ntTSL 2 BASIC16.37■□□□□ 0.21
CHRNA1P02708 IGHV4-4-201ENST00000455737 417 ntAPPRIS P1 BASIC16.37■□□□□ 0.21
CHRNA1P02708 PABPC5-AS1-201ENST00000456187 426 ntTSL 5 BASIC16.37■□□□□ 0.21
CHRNA1P02708 HLA-J-204ENST00000495278 958 ntBASIC16.37■□□□□ 0.21
CHRNA1P02708 UCHL1-207ENST00000508768 827 ntTSL 3 BASIC16.37■□□□□ 0.21
CHRNA1P02708 MRPL48-210ENST00000542303 661 ntTSL 3 BASIC16.37■□□□□ 0.21
CHRNA1P02708 NRN1L-202ENST00000576147 681 ntAPPRIS ALT2 TSL 2 BASIC16.37■□□□□ 0.21
CHRNA1P02708 AC145343.1-201ENST00000579629 650 ntTSL 3 BASIC16.37■□□□□ 0.21
CHRNA1P02708 MIR4706-201ENST00000582134 82 ntBASIC16.37■□□□□ 0.21
CHRNA1P02708 PAX4-207ENST00000611453 1235 ntTSL 5 BASIC16.37■□□□□ 0.21
CHRNA1P02708 AL136295.7-201ENST00000619226 1200 ntBASIC16.37■□□□□ 0.21
CHRNA1P02708 HYAL1-202ENST00000320295 2324 ntAPPRIS P1 TSL 2 BASIC16.37■□□□□ 0.21
CHRNA1P02708 ADAMTS16-201ENST00000274181 4979 ntAPPRIS P1 TSL 2 BASIC16.37■□□□□ 0.21
CHRNA1P02708 TAMM41-205ENST00000444133 1619 ntTSL 2 BASIC16.37■□□□□ 0.21
CHRNA1P02708 AC005064.1-201ENST00000422488 2725 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
CHRNA1P02708 FLJ42969-201ENST00000514926 1948 ntTSL 2 BASIC16.37■□□□□ 0.21
CHRNA1P02708 C19orf68-203ENST00000614654 3588 ntAPPRIS P2 TSL 5 BASIC16.37■□□□□ 0.21
CHRNA1P02708 NR1H3-235ENST00000616973 1919 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
CHRNA1P02708 AL157791.1-201ENST00000553667 1699 ntBASIC16.37■□□□□ 0.21
CHRNA1P02708 AC006058.4-201ENST00000624016 1670 ntBASIC16.37■□□□□ 0.21
CHRNA1P02708 LINC00094-205ENST00000603928 5722 ntAPPRIS ALT2 TSL 2 BASIC16.36■□□□□ 0.21
CHRNA1P02708 PTGDR2-201ENST00000332539 2895 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
CHRNA1P02708 CENPK-202ENST00000396679 1734 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
CHRNA1P02708 ATP6V0E2-201ENST00000421974 2605 ntTSL 1 (best) BASIC16.36■□□□□ 0.21
CHRNA1P02708 ANTXR1-201ENST00000303714 5859 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
CHRNA1P02708 RALGDS-205ENST00000393160 3801 ntAPPRIS ALT2 TSL 1 (best) BASIC16.36■□□□□ 0.21
CHRNA1P02708 COPS7B-206ENST00000410017 2051 ntTSL 3 BASIC16.36■□□□□ 0.21
CHRNA1P02708 NSFL1C-201ENST00000216879 3568 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
CHRNA1P02708 CCDC120-202ENST00000496529 2415 ntAPPRIS P3 TSL 2 BASIC16.36■□□□□ 0.21
CHRNA1P02708 ZNF821-203ENST00000446827 1822 ntTSL 1 (best) BASIC16.36■□□□□ 0.21
CHRNA1P02708 CNN1-210ENST00000592923 1848 ntTSL 2 BASIC16.36■□□□□ 0.21
CHRNA1P02708 TMEM40-204ENST00000435218 1547 ntAPPRIS ALT2 TSL 1 (best) BASIC16.36■□□□□ 0.21
CHRNA1P02708 HSD17B6-206ENST00000555159 1525 ntAPPRIS P1 TSL 5 BASIC16.36■□□□□ 0.21
CHRNA1P02708 GLOD4-203ENST00000536578 2497 ntTSL 5 BASIC16.36■□□□□ 0.21
CHRNA1P02708 HNRNPF-201ENST00000337970 2186 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
CHRNA1P02708 SMARCE1-205ENST00000431889 1569 ntTSL 2 BASIC16.36■□□□□ 0.21
CHRNA1P02708 KDM5C-204ENST00000375401 6031 ntAPPRIS P3 TSL 1 (best) BASIC16.36■□□□□ 0.21
CHRNA1P02708 ARF5-201ENST00000000233 1103 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
CHRNA1P02708 APRT-201ENST00000378364 947 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
CHRNA1P02708 NRSN2-201ENST00000382285 1047 ntAPPRIS P1 TSL 2 BASIC16.36■□□□□ 0.21
CHRNA1P02708 AL645608.5-201ENST00000398216 443 ntTSL 3 BASIC16.36■□□□□ 0.21
CHRNA1P02708 FAM58BP-201ENST00000439056 645 ntBASIC16.36■□□□□ 0.21
CHRNA1P02708 AL160290.2-202ENST00000448671 574 ntTSL 3 BASIC16.36■□□□□ 0.21
CHRNA1P02708 CLDN11-207ENST00000486975 1139 ntTSL 2 BASIC16.36■□□□□ 0.21
CHRNA1P02708 PMP22-206ENST00000494511 872 ntTSL 1 (best) BASIC16.36■□□□□ 0.21
CHRNA1P02708 AC008438.1-201ENST00000507521 549 ntTSL 2 BASIC16.36■□□□□ 0.21
CHRNA1P02708 IGFLR1-211ENST00000592889 782 ntAPPRIS ALT2 TSL 1 (best) BASIC16.36■□□□□ 0.21
CHRNA1P02708 AC008743.1-201ENST00000596350 813 ntTSL 4 BASIC16.36■□□□□ 0.21
CHRNA1P02708 AC008825.2-201ENST00000603374 718 ntBASIC16.36■□□□□ 0.21
CHRNA1P02708 HDDC2-204ENST00000608295 879 ntTSL 5 BASIC16.36■□□□□ 0.21
CHRNA1P02708 AC234782.2-201ENST00000614615 1240 ntTSL 2 BASIC16.36■□□□□ 0.21
CHRNA1P02708 AMT-239ENST00000636865 1914 ntTSL 5 BASIC16.36■□□□□ 0.21
CHRNA1P02708 LTBR-201ENST00000228918 2260 ntAPPRIS P3 TSL 1 (best) BASIC16.36■□□□□ 0.21
CHRNA1P02708 ACSF2-202ENST00000427954 2251 ntTSL 2 BASIC16.36■□□□□ 0.21
CHRNA1P02708 HMBS-216ENST00000543090 1347 ntTSL 5 BASIC16.36■□□□□ 0.21
CHRNA1P02708 TRIM24-202ENST00000415680 3799 ntAPPRIS ALT2 TSL 1 (best) BASIC16.36■□□□□ 0.21
CHRNA1P02708 TNIP1-219ENST00000524280 1716 ntTSL 1 (best) BASIC16.36■□□□□ 0.21
CHRNA1P02708 AC023090.2-201ENST00000625182 2110 ntBASIC16.36■□□□□ 0.21
CHRNA1P02708 SELENOS-201ENST00000398226 1439 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
CHRNA1P02708 MYL6-219ENST00000551589 1438 ntAPPRIS ALT1 TSL 2 BASIC16.36■□□□□ 0.21
CHRNA1P02708 MIF4GD-208ENST00000579297 1419 ntTSL 2 BASIC16.36■□□□□ 0.21
CHRNA1P02708 TSC1-202ENST00000403810 1507 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
CHRNA1P02708 STAR-201ENST00000276449 1929 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
CHRNA1P02708 KCND3-202ENST00000315987 2716 ntAPPRIS P4 TSL 1 (best) BASIC16.35■□□□□ 0.21
CHRNA1P02708 SEMA5B-202ENST00000357599 4792 ntAPPRIS P3 TSL 1 (best) BASIC16.35■□□□□ 0.21
CHRNA1P02708 FAM86B1-216ENST00000533852 2043 ntAPPRIS ALT2 TSL 5 BASIC16.35■□□□□ 0.21
CHRNA1P02708 NFATC2-206ENST00000609943 5690 ntAPPRIS ALT2 TSL 1 (best) BASIC16.35■□□□□ 0.21
CHRNA1P02708 REXO1L2P-201ENST00000425429 2069 ntBASIC16.35■□□□□ 0.21
CHRNA1P02708 PRODH2-201ENST00000301175 1677 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
CHRNA1P02708 PDZK1IP1-201ENST00000294338 846 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
CHRNA1P02708 NCR3-201ENST00000340027 1042 ntAPPRIS P3 TSL 1 (best) BASIC16.35■□□□□ 0.21
CHRNA1P02708 PSMB5-202ENST00000361611 1294 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
CHRNA1P02708 KRTAP10-3-201ENST00000391620 971 ntAPPRIS P1 BASIC16.35■□□□□ 0.21
CHRNA1P02708 AC079807.2-203ENST00000417692 656 ntTSL 2 BASIC16.35■□□□□ 0.21
CHRNA1P02708 AL451042.2-201ENST00000424774 904 ntTSL 2 BASIC16.35■□□□□ 0.21
CHRNA1P02708 PSMB5-203ENST00000425762 900 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
CHRNA1P02708 MNX1-AS2-201ENST00000429228 374 ntTSL 3 BASIC16.35■□□□□ 0.21
CHRNA1P02708 NFATC4-211ENST00000554344 2955 ntAPPRIS ALT2 TSL 1 (best) BASIC16.35■□□□□ 0.21
CHRNA1P02708 AC016044.1-201ENST00000560818 572 ntTSL 4 BASIC16.35■□□□□ 0.21
CHRNA1P02708 MIR4722-201ENST00000578292 60 ntBASIC16.35■□□□□ 0.21
CHRNA1P02708 GEMIN7-204ENST00000591747 576 ntAPPRIS P1 TSL 5 BASIC16.35■□□□□ 0.21
CHRNA1P02708 AL132994.2-201ENST00000603120 687 ntBASIC16.35■□□□□ 0.21
CHRNA1P02708 SCP2-217ENST00000640998 1101 ntTSL 5 BASIC16.35■□□□□ 0.21
CHRNA1P02708 ASB3-202ENST00000394717 1734 ntTSL 2 BASIC16.35■□□□□ 0.21
CHRNA1P02708 TMC5-202ENST00000381414 4755 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
CHRNA1P02708 NUCB1-202ENST00000407032 2158 ntAPPRIS P2 TSL 5 BASIC16.35■□□□□ 0.21
Retrieved 100 of 98,524 protein–RNA pairs in 77.3 ms