Protein–RNA interactions for Protein: P01903

HLA-DRA, HLA class II histocompatibility antigen, DR alpha chain, humanhuman

Predictions only

Length 254 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DRAP01903 PXYLP1-201ENST00000286353 3281 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
HLA-DRAP01903 KIAA1211-206ENST00000541073 4117 ntAPPRIS ALT2 TSL 1 (best) BASIC16.34■□□□□ 0.21
HLA-DRAP01903 APP-208ENST00000439274 2517 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
HLA-DRAP01903 AC058822.1-201ENST00000507166 2550 ntAPPRIS P1 TSL 2 BASIC16.33■□□□□ 0.21
HLA-DRAP01903 SEPT8-212ENST00000458488 1726 ntTSL 5 BASIC16.33■□□□□ 0.21
HLA-DRAP01903 TBP-206ENST00000540980 1701 ntAPPRIS ALT2 TSL 2 BASIC16.33■□□□□ 0.21
HLA-DRAP01903 DHX36-201ENST00000308361 3487 ntTSL 1 (best) BASIC16.33■□□□□ 0.21
HLA-DRAP01903 SOX30-202ENST00000311371 2716 ntAPPRIS ALT2 TSL 1 (best) BASIC16.33■□□□□ 0.21
HLA-DRAP01903 FAM118B-210ENST00000627851 1862 ntTSL 5 BASIC16.33■□□□□ 0.21
HLA-DRAP01903 MFSD13A-201ENST00000238936 2852 ntAPPRIS P1 TSL 5 BASIC16.33■□□□□ 0.21
HLA-DRAP01903 ANKMY1-207ENST00000403283 2874 ntTSL 1 (best) BASIC16.33■□□□□ 0.21
HLA-DRAP01903 AGTPBP1-208ENST00000628899 4222 ntTSL 2 BASIC16.33■□□□□ 0.21
HLA-DRAP01903 LMBRD1-202ENST00000370577 2209 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
HLA-DRAP01903 C19orf57-201ENST00000346736 2489 ntAPPRIS P2 TSL 2 BASIC16.33■□□□□ 0.2
HLA-DRAP01903 UEVLD-201ENST00000300038 995 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
HLA-DRAP01903 RHCE-205ENST00000349438 1235 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
HLA-DRAP01903 EIF1AX-201ENST00000379593 765 ntTSL 3 BASIC16.33■□□□□ 0.2
HLA-DRAP01903 TPM1-207ENST00000403994 1049 ntAPPRIS ALT1 TSL 1 (best) BASIC16.33■□□□□ 0.2
HLA-DRAP01903 PNKD-204ENST00000436005 978 ntTSL 5 BASIC16.33■□□□□ 0.2
HLA-DRAP01903 Z98749.2-207ENST00000443658 679 ntTSL 2 BASIC16.33■□□□□ 0.2
HLA-DRAP01903 AC093904.1-201ENST00000474561 455 ntTSL 3 BASIC16.33■□□□□ 0.2
HLA-DRAP01903 AC084864.1-201ENST00000496217 305 ntTSL 3 BASIC16.33■□□□□ 0.2
HLA-DRAP01903 AC106760.1-201ENST00000508690 800 ntBASIC16.33■□□□□ 0.2
HLA-DRAP01903 LINC01595-201ENST00000555406 639 ntTSL 3 BASIC16.33■□□□□ 0.2
HLA-DRAP01903 AC099482.1-201ENST00000563471 481 ntTSL 2 BASIC16.33■□□□□ 0.2
HLA-DRAP01903 AC016727.1-204ENST00000578974 420 ntTSL 3 BASIC16.33■□□□□ 0.2
HLA-DRAP01903 TUBB6-213ENST00000591909 1017 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
HLA-DRAP01903 AC015936.2-201ENST00000593177 259 ntBASIC16.33■□□□□ 0.2
HLA-DRAP01903 AC145423.3-201ENST00000615987 467 ntBASIC16.33■□□□□ 0.2
HLA-DRAP01903 SPPL2B-207ENST00000610743 2583 ntAPPRIS ALT2 TSL 1 (best) BASIC16.33■□□□□ 0.2
HLA-DRAP01903 KCNC1-202ENST00000379472 7965 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
HLA-DRAP01903 DDX55-201ENST00000238146 2654 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
HLA-DRAP01903 SULT2B1-202ENST00000323090 1447 ntAPPRIS ALT2 TSL 1 (best) BASIC16.33■□□□□ 0.2
HLA-DRAP01903 MIF4GD-208ENST00000579297 1419 ntTSL 2 BASIC16.33■□□□□ 0.2
HLA-DRAP01903 ITGB7-201ENST00000267082 2867 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
HLA-DRAP01903 MDFIC-202ENST00000393486 4393 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
HLA-DRAP01903 PRR19-201ENST00000341747 1530 ntAPPRIS P2 TSL 5 BASIC16.33■□□□□ 0.2
HLA-DRAP01903 ZFYVE28-210ENST00000515169 1590 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
HLA-DRAP01903 OTUD6A-201ENST00000338352 1689 ntAPPRIS P1 BASIC16.33■□□□□ 0.2
HLA-DRAP01903 MRPS17-201ENST00000285298 1845 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
HLA-DRAP01903 ADPRHL1-201ENST00000356501 1877 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
HLA-DRAP01903 PTPN20-206ENST00000395722 1995 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
HLA-DRAP01903 AC023090.2-201ENST00000625182 2110 ntBASIC16.33■□□□□ 0.2
HLA-DRAP01903 HVCN1-202ENST00000356742 2189 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
HLA-DRAP01903 SERPINE2-202ENST00000409304 2161 ntAPPRIS ALT1 TSL 1 (best) BASIC16.33■□□□□ 0.2
HLA-DRAP01903 ASTN2-201ENST00000288520 2356 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
HLA-DRAP01903 MARVELD1-201ENST00000285605 3221 ntAPPRIS P1 TSL 2 BASIC16.32■□□□□ 0.2
HLA-DRAP01903 TDRD6-201ENST00000316081 6817 ntAPPRIS P3 TSL 1 (best) BASIC16.32■□□□□ 0.2
HLA-DRAP01903 PARP10-201ENST00000313028 3497 ntAPPRIS P3 TSL 1 (best) BASIC16.32■□□□□ 0.2
HLA-DRAP01903 CHN2-201ENST00000222792 3530 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
HLA-DRAP01903 NLRX1-202ENST00000409109 4092 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
HLA-DRAP01903 KIAA1211-203ENST00000504228 4628 ntAPPRIS P2 TSL 5 BASIC16.32■□□□□ 0.2
HLA-DRAP01903 GPKOW-201ENST00000156109 1742 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
HLA-DRAP01903 FUCA2-201ENST00000002165 2356 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
HLA-DRAP01903 SELPLG-201ENST00000228463 1704 ntAPPRIS ALT2 TSL 2 BASIC16.32■□□□□ 0.2
HLA-DRAP01903 ATP6V1F-201ENST00000249289 704 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
HLA-DRAP01903 RAB41-201ENST00000276066 1071 ntAPPRIS P2 TSL 1 (best) BASIC16.32■□□□□ 0.2
HLA-DRAP01903 PDIA4-201ENST00000286091 2903 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
HLA-DRAP01903 PODN-201ENST00000312553 3010 ntAPPRIS P3 TSL 1 (best) BASIC16.32■□□□□ 0.2
HLA-DRAP01903 AC068946.1-202ENST00000318673 2745 ntAPPRIS P1 TSL 2 BASIC16.32■□□□□ 0.2
HLA-DRAP01903 BRCC3-201ENST00000330045 2496 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
HLA-DRAP01903 F8-201ENST00000330287 2620 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
HLA-DRAP01903 R3HDM2-201ENST00000347140 4331 ntAPPRIS P2 TSL 1 (best) BASIC16.32■□□□□ 0.2
HLA-DRAP01903 LY9-204ENST00000368039 1364 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
HLA-DRAP01903 HENMT1-202ENST00000370032 1874 ntAPPRIS P2 TSL 1 (best) BASIC16.32■□□□□ 0.2
HLA-DRAP01903 PKIG-204ENST00000372889 1489 ntAPPRIS P1 TSL 5 BASIC16.32■□□□□ 0.2
HLA-DRAP01903 RAB41-202ENST00000374473 1074 ntAPPRIS ALT2 TSL 5 BASIC16.32■□□□□ 0.2
HLA-DRAP01903 NQO2-202ENST00000380430 1098 ntAPPRIS P1 TSL 5 BASIC16.32■□□□□ 0.2
HLA-DRAP01903 DDX1-202ENST00000381341 2817 ntAPPRIS P1 TSL 5 BASIC16.32■□□□□ 0.2
HLA-DRAP01903 NDUFC1-201ENST00000394223 598 ntAPPRIS P1 TSL 3 BASIC16.32■□□□□ 0.2
HLA-DRAP01903 BLVRA-202ENST00000402924 1161 ntAPPRIS P1 TSL 2 BASIC16.32■□□□□ 0.2
HLA-DRAP01903 COMT-205ENST00000406520 1339 ntAPPRIS P3 TSL 1 (best) BASIC16.32■□□□□ 0.2
HLA-DRAP01903 NGDN-202ENST00000408901 1143 ntAPPRIS ALT2 TSL 1 (best) BASIC16.32■□□□□ 0.2
HLA-DRAP01903 AC007319.1-202ENST00000412276 829 ntTSL 5 BASIC16.32■□□□□ 0.2
HLA-DRAP01903 AL589986.1-201ENST00000429230 789 ntTSL 5 BASIC16.32■□□□□ 0.2
HLA-DRAP01903 POM121-203ENST00000434423 3750 ntAPPRIS ALT2 TSL 5 BASIC16.32■□□□□ 0.2
HLA-DRAP01903 AC124944.1-201ENST00000448113 625 ntTSL 2 BASIC16.32■□□□□ 0.2
HLA-DRAP01903 FAM172A-204ENST00000505869 1387 ntTSL 2 BASIC16.32■□□□□ 0.2
HLA-DRAP01903 CCKBR-202ENST00000525014 792 ntTSL 4 BASIC16.32■□□□□ 0.2
HLA-DRAP01903 TP53I11-208ENST00000525680 2647 ntAPPRIS P1 TSL 2 BASIC16.32■□□□□ 0.2
HLA-DRAP01903 SLC25A47P1-201ENST00000531577 414 ntBASIC16.32■□□□□ 0.2
HLA-DRAP01903 CSF1R-209ENST00000543093 921 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
HLA-DRAP01903 AC023824.1-201ENST00000562945 2975 ntBASIC16.32■□□□□ 0.2
HLA-DRAP01903 AC007611.1-201ENST00000568150 826 ntTSL 2 BASIC16.32■□□□□ 0.2
HLA-DRAP01903 KCNG4-202ENST00000568181 2199 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
HLA-DRAP01903 RPS15-202ENST00000585665 467 ntTSL 3 BASIC16.32■□□□□ 0.2
HLA-DRAP01903 AC010641.1-201ENST00000591757 529 ntTSL 3 BASIC16.32■□□□□ 0.2
HLA-DRAP01903 COX6B1-204ENST00000592141 660 ntAPPRIS P1 TSL 3 BASIC16.32■□□□□ 0.2
HLA-DRAP01903 ZSCAN30-208ENST00000592278 731 ntTSL 4 BASIC16.32■□□□□ 0.2
HLA-DRAP01903 CICP23-201ENST00000605013 2741 ntBASIC16.32■□□□□ 0.2
HLA-DRAP01903 APBB1-219ENST00000608704 2095 ntTSL 5 BASIC16.32■□□□□ 0.2
HLA-DRAP01903 SPIN2A-203ENST00000614076 966 ntTSL 3 BASIC16.32■□□□□ 0.2
HLA-DRAP01903 GPN1-212ENST00000616939 1832 ntAPPRIS P2 TSL 1 (best) BASIC16.32■□□□□ 0.2
HLA-DRAP01903 AL160035.1-201ENST00000637583 576 ntTSL 4 BASIC16.32■□□□□ 0.2
HLA-DRAP01903 CBLN4-201ENST00000064571 3024 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
HLA-DRAP01903 PRDM1-203ENST00000369096 5164 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
HLA-DRAP01903 PDE4A-203ENST00000380702 4781 ntAPPRIS P4 TSL 1 (best) BASIC16.32■□□□□ 0.2
HLA-DRAP01903 EPB41L3-206ENST00000544123 3972 ntAPPRIS ALT2 TSL 2 BASIC16.32■□□□□ 0.2
HLA-DRAP01903 CEP63-212ENST00000513612 2903 ntAPPRIS P3 TSL 2 BASIC16.32■□□□□ 0.2
HLA-DRAP01903 ASIC4-201ENST00000347842 2684 ntAPPRIS P2 TSL 1 (best) BASIC16.32■□□□□ 0.2
Retrieved 100 of 98,524 protein–RNA pairs in 44.5 ms