Protein–RNA interactions for Protein: P01730

CD4, T-cell surface glycoprotein CD4, humanhuman

Predictions only

Length 458 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CD4P01730 TP53AIP1-204ENST00000530777 363 ntAPPRIS ALT2 TSL 1 (best) BASIC16.69■□□□□ 0.26
CD4P01730 AC005865.1-202ENST00000543036 641 ntTSL 2 BASIC16.69■□□□□ 0.26
CD4P01730 AL928654.3-201ENST00000552675 445 ntTSL 3 BASIC16.69■□□□□ 0.26
CD4P01730 AC103988.2-201ENST00000561804 725 ntBASIC16.69■□□□□ 0.26
CD4P01730 MIR3147-201ENST00000577811 66 ntBASIC16.69■□□□□ 0.26
CD4P01730 RN7SL555P-201ENST00000584742 339 ntBASIC16.69■□□□□ 0.26
CD4P01730 AC009955.4-201ENST00000597192 544 ntBASIC16.69■□□□□ 0.26
CD4P01730 AL358472.3-201ENST00000608147 415 ntBASIC16.69■□□□□ 0.26
CD4P01730 HEY1-201ENST00000337919 2296 ntAPPRIS ALT1 TSL 1 (best) BASIC16.69■□□□□ 0.26
CD4P01730 SUN2-203ENST00000406622 2725 ntAPPRIS P1 TSL 2 BASIC16.69■□□□□ 0.26
CD4P01730 MMADHC-203ENST00000428879 1726 ntAPPRIS P1 TSL 2 BASIC16.69■□□□□ 0.26
CD4P01730 KLHL36-204ENST00000564996 2173 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
CD4P01730 AC105250.1-201ENST00000509378 2057 ntBASIC16.69■□□□□ 0.26
CD4P01730 NOP14-201ENST00000314262 2889 ntAPPRIS P3 TSL 1 (best) BASIC16.69■□□□□ 0.26
CD4P01730 C19orf48-201ENST00000345523 1503 ntAPPRIS P1 TSL 2 BASIC16.69■□□□□ 0.26
CD4P01730 SUMO1-203ENST00000392246 1536 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
CD4P01730 RAVER2-202ENST00000371072 4362 ntAPPRIS P2 TSL 1 (best) BASIC16.69■□□□□ 0.26
CD4P01730 CAMLG-201ENST00000297156 2221 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
CD4P01730 NFATC4-203ENST00000422617 5491 ntAPPRIS ALT2 TSL 1 (best) BASIC16.69■□□□□ 0.26
CD4P01730 CCNE1-203ENST00000444983 1680 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
CD4P01730 MON2-201ENST00000393629 5612 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
CD4P01730 CGGBP1-201ENST00000309534 4495 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
CD4P01730 FOXJ2-201ENST00000162391 5523 ntAPPRIS P2 TSL 1 (best) BASIC16.68■□□□□ 0.26
CD4P01730 LTBR-201ENST00000228918 2260 ntAPPRIS P3 TSL 1 (best) BASIC16.68■□□□□ 0.26
CD4P01730 DPEP1-201ENST00000261615 1592 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
CD4P01730 PAX3-206ENST00000392070 2258 ntAPPRIS P4 TSL 1 (best) BASIC16.68■□□□□ 0.26
CD4P01730 TVP23C-203ENST00000428082 1911 ntAPPRIS ALT1 TSL 1 (best) BASIC16.68■□□□□ 0.26
CD4P01730 UBE2D1-204ENST00000615793 2621 ntTSL 2 BASIC16.68■□□□□ 0.26
CD4P01730 ZNF213-206ENST00000574902 3208 ntAPPRIS P1 TSL 5 BASIC16.68■□□□□ 0.26
CD4P01730 DNAJC19-201ENST00000382564 1453 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
CD4P01730 TCAF2-203ENST00000425618 2448 ntTSL 2 BASIC16.68■□□□□ 0.26
CD4P01730 FER1L4-210ENST00000615531 5998 ntBASIC16.68■□□□□ 0.26
CD4P01730 LHFPL3-201ENST00000401970 1378 ntAPPRIS ALT1 TSL 1 (best) BASIC16.68■□□□□ 0.26
CD4P01730 HS1BP3-203ENST00000406618 1375 ntTSL 2 BASIC16.68■□□□□ 0.26
CD4P01730 AAMP-201ENST00000248450 1886 ntAPPRIS P3 TSL 1 (best) BASIC16.68■□□□□ 0.26
CD4P01730 ING5-213ENST00000636051 4199 ntTSL 5 BASIC16.68■□□□□ 0.26
CD4P01730 MBD1-202ENST00000269471 2980 ntAPPRIS ALT2 TSL 5 BASIC16.68■□□□□ 0.26
CD4P01730 CD1E-202ENST00000368155 696 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
CD4P01730 CD1E-204ENST00000368157 399 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
CD4P01730 TPD52L2-207ENST00000369927 1094 ntTSL 4 BASIC16.68■□□□□ 0.26
CD4P01730 SSR4-203ENST00000370086 643 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
CD4P01730 LYPLA2-202ENST00000374502 1072 ntTSL 2 BASIC16.68■□□□□ 0.26
CD4P01730 VAMP1-202ENST00000396308 1113 ntAPPRIS P1 TSL 2 BASIC16.68■□□□□ 0.26
CD4P01730 MRPL23-204ENST00000397297 613 ntTSL 2 BASIC16.68■□□□□ 0.26
CD4P01730 KAZN-204ENST00000400797 1295 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
CD4P01730 GHSR-202ENST00000427970 912 ntBASIC16.68■□□□□ 0.26
CD4P01730 AL139246.4-201ENST00000442305 514 ntTSL 3 BASIC16.68■□□□□ 0.26
CD4P01730 PUDPP3-201ENST00000445368 636 ntBASIC16.68■□□□□ 0.26
CD4P01730 KLK11-204ENST00000453757 1174 ntAPPRIS ALT2 TSL 1 (best) BASIC16.68■□□□□ 0.26
CD4P01730 LINC02046-201ENST00000469812 378 ntTSL 3 BASIC16.68■□□□□ 0.26
CD4P01730 SRSF10-211ENST00000484146 1089 ntTSL 2 BASIC16.68■□□□□ 0.26
CD4P01730 NDUFC2-204ENST00000528164 561 ntTSL 2 BASIC16.68■□□□□ 0.26
CD4P01730 ADIG-204ENST00000537425 770 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
CD4P01730 IQSEC3P1-201ENST00000538799 536 ntBASIC16.68■□□□□ 0.26
CD4P01730 AL445483.1-201ENST00000568695 736 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
CD4P01730 GLIS2-AS1-201ENST00000576080 340 ntTSL 2 BASIC16.68■□□□□ 0.26
CD4P01730 PYY-202ENST00000592796 580 ntAPPRIS ALT1 TSL 1 (best) BASIC16.68■□□□□ 0.26
CD4P01730 NEAT1-203ENST00000601801 487 ntTSL 4 BASIC16.68■□□□□ 0.26
CD4P01730 AP003419.4-201ENST00000616071 517 ntBASIC16.68■□□□□ 0.26
CD4P01730 AL590644.3-201ENST00000635428 1228 ntTSL 5 BASIC16.68■□□□□ 0.26
CD4P01730 PGA5-201ENST00000312403 1519 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
CD4P01730 ZNF707-223ENST00000532205 2865 ntAPPRIS P1 TSL 2 BASIC16.68■□□□□ 0.26
CD4P01730 SIX6-201ENST00000327720 2787 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
CD4P01730 ESRRB-207ENST00000556177 1427 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
CD4P01730 AL157791.1-201ENST00000553667 1699 ntBASIC16.68■□□□□ 0.26
CD4P01730 STAU2-219ENST00000522509 2173 ntTSL 2 BASIC16.68■□□□□ 0.26
CD4P01730 GAS7-213ENST00000580865 2417 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
CD4P01730 FGF11-201ENST00000293829 3063 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
CD4P01730 AC046158.3-201ENST00000624947 2558 ntBASIC16.68■□□□□ 0.26
CD4P01730 ZMYM3-203ENST00000373981 1841 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
CD4P01730 PER1-201ENST00000317276 4707 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
CD4P01730 SPCS2-201ENST00000263672 2708 ntAPPRIS P2 TSL 1 (best) BASIC16.68■□□□□ 0.26
CD4P01730 SHISA2-201ENST00000319420 2860 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
CD4P01730 HDAC8-209ENST00000373589 1740 ntTSL 2 BASIC16.67■□□□□ 0.26
CD4P01730 RAPSN-203ENST00000524487 1462 ntTSL 5 BASIC16.67■□□□□ 0.26
CD4P01730 WASH3P-204ENST00000558784 1644 ntTSL 5 BASIC16.67■□□□□ 0.26
CD4P01730 KCNJ14-201ENST00000342291 2960 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
CD4P01730 GDE1-201ENST00000353258 2958 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
CD4P01730 GFRA2-204ENST00000518077 1503 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
CD4P01730 GPS1-227ENST00000623761 1943 ntTSL 2 BASIC16.67■□□□□ 0.26
CD4P01730 POLR1D-212ENST00000630983 1931 ntTSL 5 BASIC16.67■□□□□ 0.26
CD4P01730 LINC01502-201ENST00000445997 2471 ntTSL 2 BASIC16.67■□□□□ 0.26
CD4P01730 NAP1L4-222ENST00000620138 2479 ntTSL 2 BASIC16.67■□□□□ 0.26
CD4P01730 OAS1-202ENST00000445409 1684 ntAPPRIS P3 TSL 1 (best) BASIC16.67■□□□□ 0.26
CD4P01730 NUDT1-201ENST00000339737 698 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
CD4P01730 RAB36-202ENST00000341989 936 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
CD4P01730 NUDT1-202ENST00000343985 771 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
CD4P01730 AC073316.1-202ENST00000402115 988 ntTSL 5 BASIC16.67■□□□□ 0.26
CD4P01730 AL357558.1-201ENST00000416646 456 ntTSL 2 BASIC16.67■□□□□ 0.26
CD4P01730 MYO16-AS1-201ENST00000439299 580 ntTSL 5 BASIC16.67■□□□□ 0.26
CD4P01730 PABPC5-AS1-201ENST00000456187 426 ntTSL 5 BASIC16.67■□□□□ 0.26
CD4P01730 PMP22-206ENST00000494511 872 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
CD4P01730 MCPH1-AS1-203ENST00000525186 869 ntTSL 3 BASIC16.67■□□□□ 0.26
CD4P01730 LINC01475-201ENST00000548010 766 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
CD4P01730 SEC23A-204ENST00000548032 907 ntTSL 2 BASIC16.67■□□□□ 0.26
CD4P01730 LINC00621-201ENST00000577004 1177 ntTSL 4 BASIC16.67■□□□□ 0.26
CD4P01730 AC011498.6-201ENST00000592034 510 ntTSL 5 BASIC16.67■□□□□ 0.26
CD4P01730 AC020922.3-201ENST00000595064 547 ntBASIC16.67■□□□□ 0.26
CD4P01730 AC090164.2-201ENST00000611487 516 ntBASIC16.67■□□□□ 0.26
CD4P01730 HPSE2-205ENST00000614306 447 ntTSL 5 BASIC16.67■□□□□ 0.26
Retrieved 100 of 98,524 protein–RNA pairs in 52.7 ms