Protein–RNA interactions for Protein: O60716

CTNND1, Catenin delta-1, humanhuman

Known RBP Predictions only

Length 968 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CTNND1O60716 LY6G6C-202ENST00000495859 937 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
CTNND1O60716 MARK2P5-201ENST00000507649 634 ntBASIC17.66■□□□□ 0.42
CTNND1O60716 HNRNPA1P36-201ENST00000521313 955 ntBASIC17.66■□□□□ 0.42
CTNND1O60716 AC024681.1-201ENST00000521917 487 ntBASIC17.66■□□□□ 0.42
CTNND1O60716 CD63-214ENST00000552692 949 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
CTNND1O60716 CARHSP1-203ENST00000561530 729 ntAPPRIS P1 TSL 3 BASIC17.66■□□□□ 0.42
CTNND1O60716 AP007216.2-201ENST00000562094 299 ntTSL 3 BASIC17.66■□□□□ 0.42
CTNND1O60716 AC100827.2-201ENST00000563214 1194 ntBASIC17.66■□□□□ 0.42
CTNND1O60716 AC023824.4-202ENST00000569557 849 ntTSL 3 BASIC17.66■□□□□ 0.42
CTNND1O60716 AC243964.2-201ENST00000590796 829 ntTSL 5 BASIC17.66■□□□□ 0.42
CTNND1O60716 SMIM22-211ENST00000615889 1047 ntAPPRIS P4 TSL 5 BASIC17.66■□□□□ 0.42
CTNND1O60716 SEC13-208ENST00000397109 1467 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
CTNND1O60716 SLK-202ENST00000369755 7766 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
CTNND1O60716 LRRC6-213ENST00000620350 1878 ntAPPRIS P2 TSL 1 (best) BASIC17.66■□□□□ 0.42
CTNND1O60716 INE2-201ENST00000630399 1874 ntBASIC17.66■□□□□ 0.42
CTNND1O60716 MANSC1-202ENST00000535902 5831 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
CTNND1O60716 MAPKAP1-202ENST00000350766 3256 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
CTNND1O60716 ZFP28-201ENST00000301318 4096 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
CTNND1O60716 LRRFIP2-205ENST00000421276 2522 ntTSL 2 BASIC17.66■□□□□ 0.42
CTNND1O60716 SLC29A1-206ENST00000371755 2112 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
CTNND1O60716 PES1-204ENST00000402284 2144 ntTSL 5 BASIC17.66■□□□□ 0.42
CTNND1O60716 PCCB-204ENST00000462637 1715 ntAPPRIS ALT2 TSL 3 BASIC17.66■□□□□ 0.42
CTNND1O60716 ZNF672-201ENST00000306562 2989 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
CTNND1O60716 CCNC-209ENST00000520371 2186 ntTSL 5 BASIC17.66■□□□□ 0.42
CTNND1O60716 CHSY3-201ENST00000305031 3850 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
CTNND1O60716 CTSD-211ENST00000637387 1597 ntAPPRIS ALT2 TSL 5 BASIC17.66■□□□□ 0.42
CTNND1O60716 AL513523.2-202ENST00000427283 2040 ntBASIC17.65■□□□□ 0.42
CTNND1O60716 KIF22-208ENST00000569382 2020 ntTSL 5 BASIC17.65■□□□□ 0.42
CTNND1O60716 CHRNA7-217ENST00000636603 2012 ntTSL 5 BASIC17.65■□□□□ 0.42
CTNND1O60716 AC010327.3-201ENST00000591665 1643 ntTSL 2 BASIC17.65■□□□□ 0.42
CTNND1O60716 EPHA10-203ENST00000427468 3167 ntAPPRIS ALT2 TSL 5 BASIC17.65■□□□□ 0.42
CTNND1O60716 MAP2K5-201ENST00000178640 2347 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
CTNND1O60716 INA-201ENST00000369849 3231 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
CTNND1O60716 GTF3C5-204ENST00000372108 2110 ntAPPRIS ALT2 TSL 1 (best) BASIC17.65■□□□□ 0.42
CTNND1O60716 PXK-204ENST00000383716 3035 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
CTNND1O60716 NEO1-202ENST00000339362 7342 ntAPPRIS P3 TSL 5 BASIC17.65■□□□□ 0.42
CTNND1O60716 CYP11A1-201ENST00000268053 1934 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
CTNND1O60716 AP005117.1-202ENST00000581724 1908 ntBASIC17.65■□□□□ 0.42
CTNND1O60716 CCDC121-202ENST00000394775 1472 ntAPPRIS ALT2 TSL 1 (best) BASIC17.65■□□□□ 0.42
CTNND1O60716 AC012508.2-201ENST00000567613 1472 ntBASIC17.65■□□□□ 0.42
CTNND1O60716 SHC1P1-201ENST00000425230 1745 ntBASIC17.65■□□□□ 0.42
CTNND1O60716 SF3B5-201ENST00000367569 693 ntAPPRIS P1 BASIC17.65■□□□□ 0.42
CTNND1O60716 GGCT-203ENST00000409144 836 ntTSL 2 BASIC17.65■□□□□ 0.42
CTNND1O60716 AC010141.1-201ENST00000411585 623 ntBASIC17.65■□□□□ 0.42
CTNND1O60716 SUPT4H1P2-201ENST00000501248 353 ntBASIC17.65■□□□□ 0.42
CTNND1O60716 ZNF419-208ENST00000518999 746 ntTSL 3 BASIC17.65■□□□□ 0.42
CTNND1O60716 GGCT-201ENST00000005374 1032 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
CTNND1O60716 MRPL51-202ENST00000537701 601 ntTSL 2 BASIC17.65■□□□□ 0.42
CTNND1O60716 AL928654.3-201ENST00000552675 445 ntTSL 3 BASIC17.65■□□□□ 0.42
CTNND1O60716 AF111169.4-201ENST00000556368 749 ntTSL 2 BASIC17.65■□□□□ 0.42
CTNND1O60716 TCL1A-208ENST00000556450 872 ntAPPRIS P1 TSL 3 BASIC17.65■□□□□ 0.42
CTNND1O60716 DUX4L46-201ENST00000566845 751 ntBASIC17.65■□□□□ 0.42
CTNND1O60716 MBD3L2B-202ENST00000637800 774 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
CTNND1O60716 AL805961.1-203ENST00000641078 1258 ntBASIC17.65■□□□□ 0.42
CTNND1O60716 RUSC1-203ENST00000368349 1968 ntAPPRIS P3 TSL 1 (best) BASIC17.65■□□□□ 0.42
CTNND1O60716 EIF4G1-204ENST00000352767 5484 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
CTNND1O60716 AC008969.1-201ENST00000550135 6438 ntTSL 2 BASIC17.65■□□□□ 0.42
CTNND1O60716 SLC9A7P1-202ENST00000556476 2239 ntBASIC17.65■□□□□ 0.42
CTNND1O60716 SERPING1-204ENST00000378324 1751 ntAPPRIS ALT2 TSL 2 BASIC17.65■□□□□ 0.42
CTNND1O60716 EXOC7-213ENST00000467929 2260 ntTSL 2 BASIC17.65■□□□□ 0.42
CTNND1O60716 KRT15-201ENST00000254043 5237 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
CTNND1O60716 ZNF767P-201ENST00000463567 3520 ntTSL 2 BASIC17.65■□□□□ 0.42
CTNND1O60716 FGR-202ENST00000374004 2350 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
CTNND1O60716 LRRC57-204ENST00000563454 2407 ntAPPRIS P1 TSL 2 BASIC17.64■□□□□ 0.42
CTNND1O60716 REXO1L4P-201ENST00000605109 1937 ntBASIC17.64■□□□□ 0.42
CTNND1O60716 AC006019.1-201ENST00000425591 2470 ntTSL 2 BASIC17.64■□□□□ 0.42
CTNND1O60716 CDKN1A-203ENST00000405375 2267 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
CTNND1O60716 SCML4-201ENST00000369020 1491 ntAPPRIS P1 TSL 5 BASIC17.64■□□□□ 0.41
CTNND1O60716 LAMC1-201ENST00000258341 7889 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
CTNND1O60716 ELMO1-209ENST00000448602 2621 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
CTNND1O60716 MYOC-201ENST00000037502 2095 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
CTNND1O60716 CALU-205ENST00000535011 3210 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
CTNND1O60716 RTL6-201ENST00000341255 5495 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
CTNND1O60716 MAEL-201ENST00000367870 1831 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
CTNND1O60716 FSD1L-206ENST00000481272 1804 ntTSL 2 BASIC17.64■□□□□ 0.41
CTNND1O60716 EPS8-201ENST00000281172 4061 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
CTNND1O60716 SYCE2-201ENST00000293695 1231 ntAPPRIS P2 TSL 1 (best) BASIC17.64■□□□□ 0.41
CTNND1O60716 CRYBA4-201ENST00000354760 811 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
CTNND1O60716 MRPL43-206ENST00000370236 866 ntAPPRIS P1 TSL 2 BASIC17.64■□□□□ 0.41
CTNND1O60716 MRPL43-207ENST00000370241 824 ntTSL 5 BASIC17.64■□□□□ 0.41
CTNND1O60716 PTPA-217ENST00000434095 870 ntTSL 2 BASIC17.64■□□□□ 0.41
CTNND1O60716 LINC01006-204ENST00000435354 545 ntTSL 2 BASIC17.64■□□□□ 0.41
CTNND1O60716 FAM58BP-201ENST00000439056 645 ntBASIC17.64■□□□□ 0.41
CTNND1O60716 MAGEA5-201ENST00000446757 942 ntBASIC17.64■□□□□ 0.41
CTNND1O60716 UCHL1-207ENST00000508768 827 ntTSL 3 BASIC17.64■□□□□ 0.41
CTNND1O60716 AP003065.1-201ENST00000540912 562 ntTSL 4 BASIC17.64■□□□□ 0.41
CTNND1O60716 AL135838.1-202ENST00000556411 441 ntTSL 2 BASIC17.64■□□□□ 0.41
CTNND1O60716 AL161670.2-201ENST00000557650 1227 ntBASIC17.64■□□□□ 0.41
CTNND1O60716 DHRS7C-202ENST00000571134 984 ntAPPRIS ALT1 TSL 1 (best) BASIC17.64■□□□□ 0.41
CTNND1O60716 RANGRF-205ENST00000580434 749 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
CTNND1O60716 RN7SL574P-201ENST00000581512 297 ntBASIC17.64■□□□□ 0.41
CTNND1O60716 C1QTNF1-AS1-202ENST00000581579 865 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
CTNND1O60716 RPS15-202ENST00000585665 467 ntTSL 3 BASIC17.64■□□□□ 0.41
CTNND1O60716 AL136295.7-201ENST00000619226 1200 ntBASIC17.64■□□□□ 0.41
CTNND1O60716 PCBP2-OT1-201ENST00000634357 590 ntBASIC17.64■□□□□ 0.41
CTNND1O60716 CD5L-201ENST00000368174 2191 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
CTNND1O60716 ARMC5-203ENST00000457010 4844 ntAPPRIS P3 TSL 1 (best) BASIC17.64■□□□□ 0.41
CTNND1O60716 CXorf40B-202ENST00000370404 1316 ntAPPRIS P2 TSL 2 BASIC17.64■□□□□ 0.41
CTNND1O60716 SLIT1-204ENST00000371070 4564 ntTSL 5 BASIC17.64■□□□□ 0.41
CTNND1O60716 B4GALT3-201ENST00000319769 1911 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Retrieved 100 of 98,524 protein–RNA pairs in 57.6 ms