Protein–RNA interactions for Protein: O43927

CXCL13, C-X-C motif chemokine 13, humanhuman

Predictions only

Length 109 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CXCL13O43927 MBD4-204ENST00000503197 2099 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
CXCL13O43927 AC138904.3-201ENST00000635780 2681 ntTSL 5 BASIC13.62□□□□□ -0.23
CXCL13O43927 KCTD1-203ENST00000417602 1705 ntAPPRIS P1 TSL 5 BASIC13.62□□□□□ -0.23
CXCL13O43927 SYBU-209ENST00000446070 2919 ntAPPRIS P4 TSL 1 (best) BASIC13.62□□□□□ -0.23
CXCL13O43927 C16orf54-201ENST00000329410 2585 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
CXCL13O43927 GRAMD4-203ENST00000408031 2834 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
CXCL13O43927 CAMK2D-211ENST00000511664 2210 ntTSL 2 BASIC13.62□□□□□ -0.23
CXCL13O43927 MPPE1-201ENST00000309976 1636 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
CXCL13O43927 MIER1-209ENST00000401042 1648 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
CXCL13O43927 OIT3-202ENST00000622652 1602 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
CXCL13O43927 UBE4B-201ENST00000253251 4772 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
CXCL13O43927 MAP3K11-201ENST00000309100 3566 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
CXCL13O43927 CMA1-202ENST00000250378 937 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
CXCL13O43927 C10orf62-201ENST00000370640 1208 ntAPPRIS P1 BASIC13.62□□□□□ -0.23
CXCL13O43927 GABARAPL2-201ENST00000037243 1002 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
CXCL13O43927 IFT20-203ENST00000395418 825 ntAPPRIS P4 TSL 1 (best) BASIC13.62□□□□□ -0.23
CXCL13O43927 DSCR3-202ENST00000398998 988 ntTSL 5 BASIC13.62□□□□□ -0.23
CXCL13O43927 AL121983.1-201ENST00000424181 335 ntTSL 2 BASIC13.62□□□□□ -0.23
CXCL13O43927 EIF3FP3-201ENST00000434851 1086 ntBASIC13.62□□□□□ -0.23
CXCL13O43927 RPS24-203ENST00000435275 656 ntAPPRIS ALT1 TSL 2 BASIC13.62□□□□□ -0.23
CXCL13O43927 AL731661.1-201ENST00000438217 758 ntTSL 5 BASIC13.62□□□□□ -0.23
CXCL13O43927 IQCF3-202ENST00000440739 505 ntAPPRIS P1 TSL 2 BASIC13.62□□□□□ -0.23
CXCL13O43927 AC072022.1-201ENST00000450760 1144 ntAPPRIS P1 TSL 3 BASIC13.62□□□□□ -0.23
CXCL13O43927 KLF2P4-201ENST00000451959 1225 ntBASIC13.62□□□□□ -0.23
CXCL13O43927 CTBP2P5-201ENST00000454986 1264 ntBASIC13.62□□□□□ -0.23
CXCL13O43927 AAMDC-206ENST00000526415 579 ntAPPRIS P1 TSL 2 BASIC13.62□□□□□ -0.23
CXCL13O43927 AC021054.1-202ENST00000543884 599 ntTSL 3 BASIC13.62□□□□□ -0.23
CXCL13O43927 NOP2-220ENST00000545915 630 ntTSL 2 BASIC13.62□□□□□ -0.23
CXCL13O43927 SNX29P1-201ENST00000548357 1007 ntBASIC13.62□□□□□ -0.23
CXCL13O43927 IFT20-216ENST00000588477 774 ntTSL 5 BASIC13.62□□□□□ -0.23
CXCL13O43927 RPS24-214ENST00000613865 538 ntTSL 5 BASIC13.62□□□□□ -0.23
CXCL13O43927 HIST1H3I-201ENST00000616365 411 ntAPPRIS P1 BASIC13.62□□□□□ -0.23
CXCL13O43927 WNT11-204ENST00000621122 789 ntTSL 5 BASIC13.62□□□□□ -0.23
CXCL13O43927 FARP1-214ENST00000595437 4926 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
CXCL13O43927 GFRA2-204ENST00000518077 1503 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
CXCL13O43927 TRPC6-203ENST00000360497 2631 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
CXCL13O43927 SUMO3-203ENST00000397898 1779 ntTSL 3 BASIC13.62□□□□□ -0.23
CXCL13O43927 TGFB1I1-214ENST00000567607 1770 ntAPPRIS P3 TSL 1 (best) BASIC13.62□□□□□ -0.23
CXCL13O43927 AC055811.4-201ENST00000624039 1754 ntBASIC13.62□□□□□ -0.23
CXCL13O43927 AL138709.1-201ENST00000614840 1693 ntBASIC13.62□□□□□ -0.23
CXCL13O43927 KCNJ18-201ENST00000567955 2196 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
CXCL13O43927 ITGAV-201ENST00000261023 7030 ntAPPRIS P3 TSL 1 (best) BASIC13.62□□□□□ -0.23
CXCL13O43927 PDE1B-201ENST00000243052 3444 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
CXCL13O43927 REXO1L2P-201ENST00000425429 2069 ntBASIC13.62□□□□□ -0.23
CXCL13O43927 COL17A1-201ENST00000353479 5734 ntAPPRIS P2 TSL 1 (best) BASIC13.62□□□□□ -0.23
CXCL13O43927 RALGAPA1-203ENST00000389698 7864 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
CXCL13O43927 CCDC51-204ENST00000442740 1554 ntTSL 3 BASIC13.62□□□□□ -0.23
CXCL13O43927 RASGEF1A-204ENST00000395810 3235 ntAPPRIS P3 TSL 1 (best) BASIC13.62□□□□□ -0.23
CXCL13O43927 SLC1A7-204ENST00000611397 2499 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
CXCL13O43927 CENPT-202ENST00000440851 2200 ntAPPRIS P2 TSL 5 BASIC13.62□□□□□ -0.23
CXCL13O43927 FAM156A-206ENST00000612915 2233 ntAPPRIS P2 TSL 5 BASIC13.62□□□□□ -0.23
CXCL13O43927 MIEF2-203ENST00000395704 2879 ntTSL 2 BASIC13.61□□□□□ -0.23
CXCL13O43927 POLD3-208ENST00000532497 1700 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
CXCL13O43927 ATP6V0E2-201ENST00000421974 2605 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
CXCL13O43927 PHF19-203ENST00000419155 3525 ntTSL 2 BASIC13.61□□□□□ -0.23
CXCL13O43927 PLD3-204ENST00000409281 2115 ntAPPRIS P1 TSL 2 BASIC13.61□□□□□ -0.23
CXCL13O43927 AL137783.1-201ENST00000623494 1896 ntBASIC13.61□□□□□ -0.23
CXCL13O43927 CAST-224ENST00000508830 2539 ntAPPRIS ALT2 TSL 5 BASIC13.61□□□□□ -0.23
CXCL13O43927 COPS3-201ENST00000268717 1641 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
CXCL13O43927 ASPH-202ENST00000379449 1603 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
CXCL13O43927 BCL9L-202ENST00000526143 5514 ntTSL 5 BASIC13.61□□□□□ -0.23
CXCL13O43927 HNF1A-211ENST00000543427 2819 ntTSL 5 BASIC13.61□□□□□ -0.23
CXCL13O43927 USP37-202ENST00000338465 1771 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
CXCL13O43927 INPP5B-204ENST00000373026 3230 ntAPPRIS ALT2 TSL 5 BASIC13.61□□□□□ -0.23
CXCL13O43927 PTGES3L-AARSD1-204ENST00000421990 2150 ntAPPRIS P1 TSL 2 BASIC13.61□□□□□ -0.23
CXCL13O43927 IL12RB2-201ENST00000262345 4040 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
CXCL13O43927 WDR45B-201ENST00000392325 2587 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
CXCL13O43927 ZNF764-202ENST00000395091 2970 ntAPPRIS ALT1 TSL 2 BASIC13.61□□□□□ -0.23
CXCL13O43927 MAP2K6-209ENST00000613873 1509 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
CXCL13O43927 AGPS-201ENST00000264167 7764 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
CXCL13O43927 EML3-202ENST00000394773 3256 ntAPPRIS P2 TSL 1 (best) BASIC13.61□□□□□ -0.23
CXCL13O43927 SMAP1-202ENST00000370452 2491 ntTSL 2 BASIC13.61□□□□□ -0.23
CXCL13O43927 CDK11B-207ENST00000626918 2457 ntTSL 5 BASIC13.61□□□□□ -0.23
CXCL13O43927 CDK11B-209ENST00000629312 2496 ntTSL 5 BASIC13.61□□□□□ -0.23
CXCL13O43927 NAGK-201ENST00000244204 1154 ntAPPRIS P5 TSL 1 (best) BASIC13.61□□□□□ -0.23
CXCL13O43927 ATP6V1F-201ENST00000249289 704 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
CXCL13O43927 MIR658-201ENST00000385210 100 ntBASIC13.61□□□□□ -0.23
CXCL13O43927 USB1-202ENST00000423271 1217 ntTSL 2 BASIC13.61□□□□□ -0.23
CXCL13O43927 FDPS-203ENST00000447866 1256 ntAPPRIS ALT1 TSL 5 BASIC13.61□□□□□ -0.23
CXCL13O43927 AC022210.1-201ENST00000449856 793 ntBASIC13.61□□□□□ -0.23
CXCL13O43927 AC104989.1-201ENST00000519711 778 ntBASIC13.61□□□□□ -0.23
CXCL13O43927 AC090735.1-201ENST00000523881 488 ntTSL 4 BASIC13.61□□□□□ -0.23
CXCL13O43927 RPL8-205ENST00000527914 551 ntTSL 3 BASIC13.61□□□□□ -0.23
CXCL13O43927 SLC38A7-207ENST00000564391 731 ntTSL 2 BASIC13.61□□□□□ -0.23
CXCL13O43927 AC012615.4-201ENST00000586694 607 ntTSL 4 BASIC13.61□□□□□ -0.23
CXCL13O43927 MIR6775-201ENST00000617557 69 ntBASIC13.61□□□□□ -0.23
CXCL13O43927 RAB34-222ENST00000625712 994 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
CXCL13O43927 SLCO4C1-201ENST00000310954 5334 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
CXCL13O43927 SGCZ-201ENST00000382080 2234 ntAPPRIS P1 TSL 5 BASIC13.61□□□□□ -0.23
CXCL13O43927 ABCC10-201ENST00000244533 5088 ntAPPRIS P3 TSL 1 (best) BASIC13.61□□□□□ -0.23
CXCL13O43927 ACTL7B-201ENST00000374667 2379 ntAPPRIS P1 BASIC13.61□□□□□ -0.23
CXCL13O43927 MEGF10-206ENST00000508365 2365 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
CXCL13O43927 PTK6-202ENST00000542869 2931 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
CXCL13O43927 MLKL-202ENST00000308807 2523 ntAPPRIS P1 TSL 2 BASIC13.61□□□□□ -0.23
CXCL13O43927 CDK11B-201ENST00000340677 2534 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
CXCL13O43927 ZNF365-205ENST00000395254 4173 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
CXCL13O43927 UHRF1BP1-202ENST00000452449 4706 ntAPPRIS ALT2 TSL 5 BASIC13.61□□□□□ -0.23
CXCL13O43927 CYP1B1-205ENST00000610745 5250 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
CXCL13O43927 RUFY2-204ENST00000399200 2685 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
CXCL13O43927 NXN-210ENST00000575801 2681 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
Retrieved 100 of 98,524 protein–RNA pairs in 57.6 ms