Protein–RNA interactions for Protein: O43567

RNF13, E3 ubiquitin-protein ligase RNF13, humanhuman

Predictions only

Length 381 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF13O43567 NATD1-201ENST00000611551 4931 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
RNF13O43567 MOSPD3-201ENST00000223054 1053 ntAPPRIS P1 TSL 2 BASIC13.92□□□□□ -0.18
RNF13O43567 HCST-201ENST00000246551 613 ntAPPRIS P3 TSL 1 (best) BASIC13.92□□□□□ -0.18
RNF13O43567 JTB-201ENST00000271843 1287 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
RNF13O43567 TM4SF19-201ENST00000273695 1022 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
RNF13O43567 DUPD1-201ENST00000338487 663 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
RNF13O43567 FCRLB-204ENST00000367946 1152 ntTSL 1 (best) BASIC13.92□□□□□ -0.18
RNF13O43567 PKIG-203ENST00000372887 769 ntTSL 3 BASIC13.92□□□□□ -0.18
RNF13O43567 AC008443.3-201ENST00000412295 549 ntTSL 4 BASIC13.92□□□□□ -0.18
RNF13O43567 VAT1-202ENST00000420567 1069 ntTSL 2 BASIC13.92□□□□□ -0.18
RNF13O43567 DIRC3-201ENST00000423123 552 ntAPPRIS P1 TSL 4 BASIC13.92□□□□□ -0.18
RNF13O43567 PAX5-207ENST00000446742 885 ntTSL 1 (best) BASIC13.92□□□□□ -0.18
RNF13O43567 AL356441.1-201ENST00000452618 492 ntTSL 3 BASIC13.92□□□□□ -0.18
RNF13O43567 AL512638.1-201ENST00000457493 794 ntBASIC13.92□□□□□ -0.18
RNF13O43567 PFN2-205ENST00000461868 613 ntTSL 2 BASIC13.92□□□□□ -0.18
RNF13O43567 ZNF890P-202ENST00000530367 1156 ntBASIC13.92□□□□□ -0.18
RNF13O43567 NRK-203ENST00000536164 908 ntTSL 1 (best) BASIC13.92□□□□□ -0.18
RNF13O43567 TBCB-211ENST00000589996 724 ntTSL 3 BASIC13.92□□□□□ -0.18
RNF13O43567 AC025181.2-201ENST00000606994 802 ntBASIC13.92□□□□□ -0.18
RNF13O43567 TMEM179-205ENST00000615704 636 ntTSL 2 BASIC13.92□□□□□ -0.18
RNF13O43567 AC093512.1-201ENST00000617969 520 ntBASIC13.92□□□□□ -0.18
RNF13O43567 MUTYH-206ENST00000372115 1888 ntTSL 1 (best) BASIC13.92□□□□□ -0.18
RNF13O43567 SLC52A3-202ENST00000381944 3060 ntTSL 2 BASIC13.92□□□□□ -0.18
RNF13O43567 KCNT1-208ENST00000488444 3696 ntAPPRIS ALT2 TSL 5 BASIC13.92□□□□□ -0.18
RNF13O43567 FP565260.6-204ENST00000620528 1640 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
RNF13O43567 LINC00691-201ENST00000432505 2232 ntTSL 1 (best) BASIC13.92□□□□□ -0.18
RNF13O43567 ZC3HAV1-204ENST00000471652 3182 ntTSL 1 (best) BASIC13.92□□□□□ -0.18
RNF13O43567 RBPMS2-202ENST00000560606 1746 ntTSL 2 BASIC13.92□□□□□ -0.18
RNF13O43567 SYBU-206ENST00000424158 3007 ntAPPRIS ALT2 TSL 1 (best) BASIC13.92□□□□□ -0.18
RNF13O43567 PIK3CG-201ENST00000359195 5377 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
RNF13O43567 CNDP2-201ENST00000324262 5130 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
RNF13O43567 UBXN11-204ENST00000374217 1846 ntAPPRIS ALT2 TSL 2 BASIC13.92□□□□□ -0.18
RNF13O43567 NSUN5P1-206ENST00000457988 1836 ntTSL 2 BASIC13.92□□□□□ -0.18
RNF13O43567 KCNN2-201ENST00000264773 2512 ntAPPRIS P2 TSL 1 (best) BASIC13.92□□□□□ -0.18
RNF13O43567 DDX50-206ENST00000610822 2510 ntTSL 5 BASIC13.92□□□□□ -0.18
RNF13O43567 EIF4G1-201ENST00000342981 5667 ntAPPRIS ALT1 TSL 1 (best) BASIC13.92□□□□□ -0.18
RNF13O43567 TRNT1-201ENST00000251607 2276 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
RNF13O43567 FLI1-205ENST00000527786 4127 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
RNF13O43567 CHRNA7-217ENST00000636603 2012 ntTSL 5 BASIC13.91□□□□□ -0.18
RNF13O43567 TP73-209ENST00000603362 1668 ntTSL 5 BASIC13.91□□□□□ -0.18
RNF13O43567 AKR7L-202ENST00000429712 1313 ntAPPRIS P5 TSL 1 (best) BASIC13.91□□□□□ -0.18
RNF13O43567 CASC2-203ENST00000435944 3270 ntTSL 1 (best) BASIC13.91□□□□□ -0.18
RNF13O43567 RTKN-202ENST00000272430 2142 ntAPPRIS ALT1 TSL 1 (best) BASIC13.91□□□□□ -0.18
RNF13O43567 OPCML-IT1-201ENST00000533859 2936 ntTSL 2 BASIC13.91□□□□□ -0.18
RNF13O43567 SCAP-206ENST00000428413 3749 ntTSL 5 BASIC13.91□□□□□ -0.18
RNF13O43567 ZBED1-202ENST00000381222 4507 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
RNF13O43567 ACTL9-201ENST00000324436 1426 ntAPPRIS P1 BASIC13.91□□□□□ -0.18
RNF13O43567 ATP6V0E1-203ENST00000519374 1433 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
RNF13O43567 RNF182-208ENST00000544682 3495 ntAPPRIS P1 TSL 4 BASIC13.91□□□□□ -0.18
RNF13O43567 EPB41L3-201ENST00000341928 4706 ntAPPRIS P3 TSL 1 (best) BASIC13.91□□□□□ -0.18
RNF13O43567 LPO-210ENST00000582328 2680 ntAPPRIS ALT2 TSL 5 BASIC13.91□□□□□ -0.18
RNF13O43567 LIMS1-202ENST00000338045 1876 ntTSL 1 (best) BASIC13.91□□□□□ -0.18
RNF13O43567 ANKLE1-201ENST00000394458 3218 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
RNF13O43567 TEKT4-201ENST00000295201 1505 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
RNF13O43567 FKBP6-202ENST00000413573 1507 ntTSL 5 BASIC13.91□□□□□ -0.18
RNF13O43567 PRSS30P-203ENST00000476276 2855 ntTSL 2 BASIC13.91□□□□□ -0.18
RNF13O43567 ARAP1-203ENST00000393605 4778 ntAPPRIS ALT2 TSL 1 (best) BASIC13.91□□□□□ -0.18
RNF13O43567 RPL18A-201ENST00000222247 665 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
RNF13O43567 ALKBH6-201ENST00000252984 955 ntAPPRIS ALT2 TSL 1 (best) BASIC13.91□□□□□ -0.18
RNF13O43567 CCDC182-201ENST00000299415 832 ntAPPRIS P1 BASIC13.91□□□□□ -0.18
RNF13O43567 WLS-203ENST00000370971 700 ntTSL 1 (best) BASIC13.91□□□□□ -0.18
RNF13O43567 HDAC8-203ENST00000373559 632 ntTSL 2 BASIC13.91□□□□□ -0.18
RNF13O43567 HDAC8-208ENST00000373583 434 ntTSL 5 BASIC13.91□□□□□ -0.18
RNF13O43567 HSD17B10-203ENST00000375304 916 ntTSL 1 (best) BASIC13.91□□□□□ -0.18
RNF13O43567 CXCL12-206ENST00000395795 404 ntTSL 5 BASIC13.91□□□□□ -0.18
RNF13O43567 CAMKMT-204ENST00000407131 652 ntTSL 3 BASIC13.91□□□□□ -0.18
RNF13O43567 ARHGAP11B-201ENST00000428041 1017 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
RNF13O43567 AC055876.3-201ENST00000431496 288 ntBASIC13.91□□□□□ -0.18
RNF13O43567 AL589923.1-201ENST00000441473 316 ntTSL 5 BASIC13.91□□□□□ -0.18
RNF13O43567 AC002116.1-201ENST00000473572 1130 ntTSL 2 BASIC13.91□□□□□ -0.18
RNF13O43567 AC114956.2-201ENST00000512498 572 ntTSL 4 BASIC13.91□□□□□ -0.18
RNF13O43567 IL32-211ENST00000525643 1272 ntAPPRIS P4 TSL 1 (best) BASIC13.91□□□□□ -0.18
RNF13O43567 IL32-213ENST00000528163 950 ntAPPRIS P4 TSL 2 BASIC13.91□□□□□ -0.18
RNF13O43567 TOMM5-205ENST00000544379 635 ntTSL 2 BASIC13.91□□□□□ -0.18
RNF13O43567 IL32-231ENST00000551513 791 ntAPPRIS ALT2 TSL 3 BASIC13.91□□□□□ -0.18
RNF13O43567 AL583722.3-202ENST00000554954 486 ntTSL 4 BASIC13.91□□□□□ -0.18
RNF13O43567 AC138649.4-201ENST00000612222 287 ntBASIC13.91□□□□□ -0.18
RNF13O43567 AC006538.3-201ENST00000612495 578 ntBASIC13.91□□□□□ -0.18
RNF13O43567 KLF4-201ENST00000374672 2813 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
RNF13O43567 MRPS17-201ENST00000285298 1845 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
RNF13O43567 SUSD5-201ENST00000309558 5008 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
RNF13O43567 AGRN-201ENST00000379370 7323 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
RNF13O43567 NMRAL1-201ENST00000283429 1376 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
RNF13O43567 ACTL6A-202ENST00000429709 1901 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
RNF13O43567 ROPN1-203ENST00000459660 1909 ntTSL 1 (best) BASIC13.91□□□□□ -0.18
RNF13O43567 CGN-201ENST00000271636 5091 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
RNF13O43567 STEAP2-202ENST00000394621 7033 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
RNF13O43567 TAF11-201ENST00000361288 1580 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
RNF13O43567 SLC1A7-206ENST00000620347 2873 ntAPPRIS ALT2 TSL 1 (best) BASIC13.91□□□□□ -0.18
RNF13O43567 ZNF84-215ENST00000543758 3501 ntAPPRIS ALT2 TSL 5 BASIC13.91□□□□□ -0.18
RNF13O43567 KNDC1-201ENST00000304613 6793 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
RNF13O43567 MPPED2-202ENST00000448418 5591 ntTSL 1 (best) BASIC13.91□□□□□ -0.18
RNF13O43567 PRODH2-201ENST00000301175 1677 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
RNF13O43567 MAPK7-203ENST00000395602 3059 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
RNF13O43567 SERP1-201ENST00000239944 3171 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
RNF13O43567 NFATC1-218ENST00000592223 2531 ntAPPRIS ALT2 TSL 1 (best) BASIC13.91□□□□□ -0.18
RNF13O43567 ASTN2-206ENST00000361477 4001 ntTSL 5 BASIC13.91□□□□□ -0.18
RNF13O43567 BPIFB2-201ENST00000170150 1898 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
RNF13O43567 ZFYVE28-201ENST00000290974 4131 ntAPPRIS P3 TSL 1 (best) BASIC13.91□□□□□ -0.18
RNF13O43567 ADCY6-201ENST00000307885 6464 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
Retrieved 100 of 98,524 protein–RNA pairs in 40.4 ms