Protein–RNA interactions for Protein: O43525

KCNQ3, Potassium voltage-gated channel subfamily KQT member 3, humanhuman

Predictions only

Length 872 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KCNQ3O43525 SLA2-202ENST00000360672 2171 ntTSL 5 BASIC19.27■□□□□ 0.68
KCNQ3O43525 ATP6V0E2-AS1-201ENST00000461019 2973 ntTSL 1 (best) BASIC19.27■□□□□ 0.68
KCNQ3O43525 ZNF706-201ENST00000311212 2615 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
KCNQ3O43525 MRC2-201ENST00000303375 5988 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.67
KCNQ3O43525 STK39-201ENST00000355999 3820 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.67
KCNQ3O43525 PSMD13-203ENST00000431206 1591 ntTSL 2 BASIC19.27■□□□□ 0.67
KCNQ3O43525 TMCO5B-204ENST00000529696 1568 ntTSL 2 BASIC19.27■□□□□ 0.67
KCNQ3O43525 MAPK3-212ENST00000484663 2567 ntTSL 1 (best) BASIC19.27■□□□□ 0.67
KCNQ3O43525 KRT82-201ENST00000257974 2664 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.67
KCNQ3O43525 DUSP13-208ENST00000478873 1335 ntTSL 5 BASIC19.26■□□□□ 0.67
KCNQ3O43525 MYO1B-204ENST00000392318 5082 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
KCNQ3O43525 PCED1B-201ENST00000432328 1862 ntAPPRIS P1 TSL 3 BASIC19.26■□□□□ 0.67
KCNQ3O43525 EXOC3L1-201ENST00000314586 2510 ntAPPRIS P1 TSL 2 BASIC19.26■□□□□ 0.67
KCNQ3O43525 MED26-201ENST00000263390 3174 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
KCNQ3O43525 AC073347.1-201ENST00000421633 2643 ntBASIC19.26■□□□□ 0.67
KCNQ3O43525 FKBP6-201ENST00000252037 1500 ntAPPRIS P3 TSL 1 (best) BASIC19.26■□□□□ 0.67
KCNQ3O43525 SLC6A13-201ENST00000343164 2185 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
KCNQ3O43525 LRRC47-201ENST00000378251 4310 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
KCNQ3O43525 DLEU2-201ENST00000235290 1739 ntTSL 5 BASIC19.26■□□□□ 0.67
KCNQ3O43525 SLC13A5-208ENST00000573648 1723 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
KCNQ3O43525 CDK11B-208ENST00000629289 2490 ntTSL 5 BASIC19.26■□□□□ 0.67
KCNQ3O43525 ARHGAP45-212ENST00000590577 3218 ntTSL 2 BASIC19.26■□□□□ 0.67
KCNQ3O43525 FZD1-201ENST00000287934 6963 ntAPPRIS P1 BASIC19.26■□□□□ 0.67
KCNQ3O43525 CHAF1A-201ENST00000301280 3339 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
KCNQ3O43525 SCAF11-204ENST00000395454 1931 ntAPPRIS ALT2 TSL 1 (best) BASIC19.26■□□□□ 0.67
KCNQ3O43525 ADGRB2-202ENST00000373658 5414 ntAPPRIS ALT2 TSL 5 BASIC19.26■□□□□ 0.67
KCNQ3O43525 PDZK1IP1-201ENST00000294338 846 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
KCNQ3O43525 FRMD3-202ENST00000328788 964 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
KCNQ3O43525 SLC25A26-201ENST00000336733 1023 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
KCNQ3O43525 NCR3-201ENST00000340027 1042 ntAPPRIS P3 TSL 1 (best) BASIC19.26■□□□□ 0.67
KCNQ3O43525 NRSN2-201ENST00000382285 1047 ntAPPRIS P1 TSL 2 BASIC19.26■□□□□ 0.67
KCNQ3O43525 SERPINE3-201ENST00000400389 1218 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
KCNQ3O43525 PACSIN2-204ENST00000403744 2110 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
KCNQ3O43525 AC074194.1-201ENST00000505025 622 ntTSL 4 BASIC19.26■□□□□ 0.67
KCNQ3O43525 AGTRAP-212ENST00000510878 849 ntTSL 3 BASIC19.26■□□□□ 0.67
KCNQ3O43525 GATD1-205ENST00000524550 995 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
KCNQ3O43525 AP003419.2-201ENST00000543494 711 ntAPPRIS P1 TSL 3 BASIC19.26■□□□□ 0.67
KCNQ3O43525 AC013355.1-201ENST00000562625 723 ntBASIC19.26■□□□□ 0.67
KCNQ3O43525 AC025259.3-202ENST00000564363 687 ntTSL 2 BASIC19.26■□□□□ 0.67
KCNQ3O43525 C1QTNF1-AS1-202ENST00000581579 865 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
KCNQ3O43525 AC132192.2-201ENST00000596206 1147 ntBASIC19.26■□□□□ 0.67
KCNQ3O43525 AC106872.11-201ENST00000605838 421 ntBASIC19.26■□□□□ 0.67
KCNQ3O43525 IGHV1OR21-1-201ENST00000622028 353 ntAPPRIS P1 BASIC19.26■□□□□ 0.67
KCNQ3O43525 ALOX12B-201ENST00000319144 2502 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
KCNQ3O43525 KCNK4-TEX40-201ENST00000539086 2733 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
KCNQ3O43525 AC006058.4-201ENST00000624016 1670 ntBASIC19.26■□□□□ 0.67
KCNQ3O43525 HORMAD1-201ENST00000322343 1771 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
KCNQ3O43525 DCLK2-201ENST00000296550 4265 ntAPPRIS P3 TSL 1 (best) BASIC19.26■□□□□ 0.67
KCNQ3O43525 SCUBE2-207ENST00000520467 3148 ntAPPRIS P1 TSL 2 BASIC19.26■□□□□ 0.67
KCNQ3O43525 CDS1-201ENST00000295887 4461 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
KCNQ3O43525 SMPD4-202ENST00000409031 4896 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
KCNQ3O43525 AC112484.1-201ENST00000508239 2291 ntAPPRIS P5 TSL 2 BASIC19.26■□□□□ 0.67
KCNQ3O43525 CCNA2-201ENST00000274026 2797 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
KCNQ3O43525 DHX36-202ENST00000329463 2985 ntAPPRIS ALT2 TSL 1 (best) BASIC19.26■□□□□ 0.67
KCNQ3O43525 PHRF1-201ENST00000264555 5523 ntAPPRIS ALT2 TSL 1 (best) BASIC19.26■□□□□ 0.67
KCNQ3O43525 THOC6-207ENST00000574549 1300 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
KCNQ3O43525 TRAPPC11-201ENST00000334690 4552 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
KCNQ3O43525 DMRTA1-201ENST00000325870 5569 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
KCNQ3O43525 NAF1-201ENST00000274054 1907 ntAPPRIS P3 TSL 1 (best) BASIC19.25■□□□□ 0.67
KCNQ3O43525 MBLAC2-202ENST00000514906 1936 ntBASIC19.25■□□□□ 0.67
KCNQ3O43525 IQCF5-AS1-201ENST00000440723 2000 ntTSL 2 BASIC19.25■□□□□ 0.67
KCNQ3O43525 HIF3A-218ENST00000600383 2101 ntTSL 2 BASIC19.25■□□□□ 0.67
KCNQ3O43525 M6PR-202ENST00000536844 2305 ntTSL 3 BASIC19.25■□□□□ 0.67
KCNQ3O43525 TBC1D3P5-202ENST00000581469 2513 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
KCNQ3O43525 GLT1D1-201ENST00000281703 2725 ntTSL 2 BASIC19.25■□□□□ 0.67
KCNQ3O43525 CICP6-201ENST00000457191 2729 ntBASIC19.25■□□□□ 0.67
KCNQ3O43525 ABCB6-201ENST00000265316 3016 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
KCNQ3O43525 GMPPB-201ENST00000308375 3217 ntTSL 2 BASIC19.25■□□□□ 0.67
KCNQ3O43525 DUSP4-201ENST00000240100 5537 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
KCNQ3O43525 FOXE1-201ENST00000375123 3462 ntAPPRIS P1 BASIC19.25■□□□□ 0.67
KCNQ3O43525 PDZD3-212ENST00000531114 2996 ntTSL 2 BASIC19.25■□□□□ 0.67
KCNQ3O43525 LRCH3-202ENST00000414675 2299 ntAPPRIS ALT2 TSL 2 BASIC19.25■□□□□ 0.67
KCNQ3O43525 CYB5R3-205ENST00000407623 2153 ntTSL 3 BASIC19.25■□□□□ 0.67
KCNQ3O43525 NAP1L1-202ENST00000393263 1896 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
KCNQ3O43525 SCLT1-209ENST00000511426 1696 ntAPPRIS ALT2 TSL 1 (best) BASIC19.25■□□□□ 0.67
KCNQ3O43525 AC104758.3-201ENST00000563349 1453 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
KCNQ3O43525 ANKRD24-202ENST00000318934 3906 ntAPPRIS P2 TSL 5 BASIC19.25■□□□□ 0.67
KCNQ3O43525 DKFZp779M0652-201ENST00000378779 649 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
KCNQ3O43525 IFITM5-201ENST00000382614 736 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
KCNQ3O43525 KRTAP10-3-201ENST00000391620 971 ntAPPRIS P1 BASIC19.25■□□□□ 0.67
KCNQ3O43525 AC005586.1-201ENST00000488310 577 ntTSL 4 BASIC19.25■□□□□ 0.67
KCNQ3O43525 KLF3-AS1-204ENST00000505240 567 ntTSL 4 BASIC19.25■□□□□ 0.67
KCNQ3O43525 AC005920.3-202ENST00000512717 789 ntTSL 3 BASIC19.25■□□□□ 0.67
KCNQ3O43525 ZNF419-208ENST00000518999 746 ntTSL 3 BASIC19.25■□□□□ 0.67
KCNQ3O43525 FAM86B1-218ENST00000534520 808 ntTSL 2 BASIC19.25■□□□□ 0.67
KCNQ3O43525 TMEM91-211ENST00000544232 725 ntTSL 3 BASIC19.25■□□□□ 0.67
KCNQ3O43525 AC079328.1-201ENST00000560358 952 ntBASIC19.25■□□□□ 0.67
KCNQ3O43525 SNORD3B-2-202ENST00000571722 791 ntBASIC19.25■□□□□ 0.67
KCNQ3O43525 RN7SL163P-201ENST00000583100 276 ntBASIC19.25■□□□□ 0.67
KCNQ3O43525 AC016629.1-201ENST00000596579 586 ntBASIC19.25■□□□□ 0.67
KCNQ3O43525 KLF3-AS1-207ENST00000620339 558 ntTSL 4 BASIC19.25■□□□□ 0.67
KCNQ3O43525 MLLT10-216ENST00000621220 381 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
KCNQ3O43525 LHX5-201ENST00000261731 2939 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
KCNQ3O43525 PTPA-203ENST00000348141 2737 ntTSL 5 BASIC19.25■□□□□ 0.67
KCNQ3O43525 PTPA-207ENST00000393370 2737 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
KCNQ3O43525 TRPC6-203ENST00000360497 2631 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
KCNQ3O43525 RHOT1-203ENST00000358365 3297 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
KCNQ3O43525 CENPK-202ENST00000396679 1734 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
KCNQ3O43525 NAA50-201ENST00000240922 6135 ntAPPRIS P3 TSL 1 (best) BASIC19.25■□□□□ 0.67
KCNQ3O43525 GHDC-201ENST00000301671 2650 ntAPPRIS P1 TSL 2 BASIC19.25■□□□□ 0.67
Retrieved 100 of 98,524 protein–RNA pairs in 49.2 ms