Protein–RNA interactions for Protein: E9PGA6

C1QTNF3-AMACR, C1QTNF3-AMACR readthrough (NMD candidate), humanhuman

Predictions only

Length 284 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
C1QTNF3-AMACRE9PGA6 OCEL1-213ENST00000601529 942 ntTSL 3 BASIC15.18■□□□□ 0.02
C1QTNF3-AMACRE9PGA6 AC073413.1-201ENST00000603927 732 ntBASIC15.18■□□□□ 0.02
C1QTNF3-AMACRE9PGA6 AL022328.3-201ENST00000607943 679 ntBASIC15.18■□□□□ 0.02
C1QTNF3-AMACRE9PGA6 AC244157.2-201ENST00000616239 1006 ntBASIC15.18■□□□□ 0.02
C1QTNF3-AMACRE9PGA6 EDDM13-208ENST00000637802 854 ntAPPRIS P1 TSL 5 BASIC15.18■□□□□ 0.02
C1QTNF3-AMACRE9PGA6 PLPPR5-201ENST00000263177 3288 ntAPPRIS P4 TSL 1 (best) BASIC15.18■□□□□ 0.02
C1QTNF3-AMACRE9PGA6 CLSTN1-201ENST00000361311 4647 ntAPPRIS P3 TSL 1 (best) BASIC15.18■□□□□ 0.02
C1QTNF3-AMACRE9PGA6 MAST1-201ENST00000251472 4833 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
C1QTNF3-AMACRE9PGA6 MYCN-202ENST00000638417 1693 ntTSL 2 BASIC15.18■□□□□ 0.02
C1QTNF3-AMACRE9PGA6 YTHDF2-209ENST00000542507 2825 ntAPPRIS P1 TSL 5 BASIC15.18■□□□□ 0.02
C1QTNF3-AMACRE9PGA6 PPM1F-202ENST00000397495 1778 ntTSL 2 BASIC15.18■□□□□ 0.02
C1QTNF3-AMACRE9PGA6 ADCYAP1R1-204ENST00000409489 1761 ntTSL 5 BASIC15.18■□□□□ 0.02
C1QTNF3-AMACRE9PGA6 ZNF276-201ENST00000289816 4589 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
C1QTNF3-AMACRE9PGA6 AC112693.3-201ENST00000624819 1983 ntBASIC15.18■□□□□ 0.02
C1QTNF3-AMACRE9PGA6 CPEB3-201ENST00000265997 4851 ntAPPRIS P3 TSL 1 (best) BASIC15.18■□□□□ 0.02
C1QTNF3-AMACRE9PGA6 MYZAP-202ENST00000380565 2181 ntAPPRIS ALT2 TSL 1 (best) BASIC15.18■□□□□ 0.02
C1QTNF3-AMACRE9PGA6 ACSL1-202ENST00000454703 3636 ntTSL 5 BASIC15.18■□□□□ 0.02
C1QTNF3-AMACRE9PGA6 FLJ31104-201ENST00000500093 2289 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
C1QTNF3-AMACRE9PGA6 SSR4P1-203ENST00000599569 2260 ntBASIC15.18■□□□□ 0.02
C1QTNF3-AMACRE9PGA6 ANKRD24-206ENST00000600132 4026 ntAPPRIS P2 TSL 5 BASIC15.18■□□□□ 0.02
C1QTNF3-AMACRE9PGA6 ASCL1-201ENST00000266744 2472 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
C1QTNF3-AMACRE9PGA6 ANKHD1-202ENST00000297183 7606 ntTSL 5 BASIC15.18■□□□□ 0.02
C1QTNF3-AMACRE9PGA6 HS6ST3-201ENST00000376705 7804 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
C1QTNF3-AMACRE9PGA6 AURKC-203ENST00000448930 1318 ntAPPRIS ALT2 TSL 5 BASIC15.17■□□□□ 0.02
C1QTNF3-AMACRE9PGA6 FKBP4P6-201ENST00000457486 1332 ntBASIC15.17■□□□□ 0.02
C1QTNF3-AMACRE9PGA6 TK1-201ENST00000301634 1628 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
C1QTNF3-AMACRE9PGA6 AC010327.3-201ENST00000591665 1643 ntTSL 2 BASIC15.17■□□□□ 0.02
C1QTNF3-AMACRE9PGA6 ATP6V0D1-201ENST00000290949 1716 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
C1QTNF3-AMACRE9PGA6 SORCS2-201ENST00000329016 5582 ntAPPRIS ALT2 TSL 5 BASIC15.17■□□□□ 0.02
C1QTNF3-AMACRE9PGA6 RPA3-201ENST00000223129 2020 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
C1QTNF3-AMACRE9PGA6 UCK1-203ENST00000372211 2114 ntTSL 3 BASIC15.17■□□□□ 0.02
C1QTNF3-AMACRE9PGA6 SLC9A7P1-202ENST00000556476 2239 ntBASIC15.17■□□□□ 0.02
C1QTNF3-AMACRE9PGA6 AC136621.1-201ENST00000624017 2304 ntBASIC15.17■□□□□ 0.02
C1QTNF3-AMACRE9PGA6 AC005064.1-201ENST00000422488 2725 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
C1QTNF3-AMACRE9PGA6 SNCAIP-202ENST00000261368 3745 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
C1QTNF3-AMACRE9PGA6 ATG9A-205ENST00000409618 4025 ntAPPRIS P1 TSL 5 BASIC15.17■□□□□ 0.02
C1QTNF3-AMACRE9PGA6 SHROOM2-201ENST00000380913 7447 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
C1QTNF3-AMACRE9PGA6 B4GALNT3-201ENST00000266383 5068 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
C1QTNF3-AMACRE9PGA6 ACSL1-208ENST00000507295 2490 ntTSL 2 BASIC15.17■□□□□ 0.02
C1QTNF3-AMACRE9PGA6 GLOD4-203ENST00000536578 2497 ntTSL 5 BASIC15.17■□□□□ 0.02
C1QTNF3-AMACRE9PGA6 CHMP1A-202ENST00000535997 2295 ntTSL 2 BASIC15.17■□□□□ 0.02
C1QTNF3-AMACRE9PGA6 NBEA-208ENST00000629018 10791 ntAPPRIS ALT1 TSL 5 BASIC15.17■□□□□ 0.02
C1QTNF3-AMACRE9PGA6 CRY2-201ENST00000417225 2053 ntTSL 2 BASIC15.17■□□□□ 0.02
C1QTNF3-AMACRE9PGA6 MKS1-204ENST00000537529 2083 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
C1QTNF3-AMACRE9PGA6 AC023024.2-201ENST00000623561 1993 ntBASIC15.17■□□□□ 0.02
C1QTNF3-AMACRE9PGA6 ATG10-203ENST00000458350 1795 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
C1QTNF3-AMACRE9PGA6 FGFR1OP-201ENST00000349556 1484 ntAPPRIS ALT2 TSL 1 (best) BASIC15.17■□□□□ 0.02
C1QTNF3-AMACRE9PGA6 RPP40-202ENST00000380051 1483 ntAPPRIS P1 TSL 5 BASIC15.17■□□□□ 0.02
C1QTNF3-AMACRE9PGA6 WASH3P-207ENST00000560956 1394 ntBASIC15.17■□□□□ 0.02
C1QTNF3-AMACRE9PGA6 BAP1-202ENST00000460680 3937 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
C1QTNF3-AMACRE9PGA6 COX6A2-201ENST00000287490 440 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
C1QTNF3-AMACRE9PGA6 CRABP1-201ENST00000299529 772 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
C1QTNF3-AMACRE9PGA6 CLRN1-203ENST00000328863 738 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
C1QTNF3-AMACRE9PGA6 CTHRC1-201ENST00000330295 1271 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
C1QTNF3-AMACRE9PGA6 TREML1-201ENST00000373127 1194 ntAPPRIS ALT2 TSL 1 (best) BASIC15.17■□□□□ 0.02
C1QTNF3-AMACRE9PGA6 PRKG1-AS1-201ENST00000420193 971 ntTSL 3 BASIC15.17■□□□□ 0.02
C1QTNF3-AMACRE9PGA6 LINC01694-201ENST00000424569 821 ntTSL 5 BASIC15.17■□□□□ 0.02
C1QTNF3-AMACRE9PGA6 SAP30L-202ENST00000426761 777 ntTSL 3 BASIC15.17■□□□□ 0.02
C1QTNF3-AMACRE9PGA6 AC006033.1-201ENST00000440505 426 ntBASIC15.17■□□□□ 0.02
C1QTNF3-AMACRE9PGA6 RPSAP36-202ENST00000494591 1261 ntBASIC15.17■□□□□ 0.02
C1QTNF3-AMACRE9PGA6 ANAPC13-205ENST00000511751 896 ntAPPRIS P1 TSL 3 BASIC15.17■□□□□ 0.02
C1QTNF3-AMACRE9PGA6 AC006487.1-201ENST00000514506 1221 ntTSL 2 BASIC15.17■□□□□ 0.02
C1QTNF3-AMACRE9PGA6 PAX5-211ENST00000522003 1019 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
C1QTNF3-AMACRE9PGA6 NOP2-211ENST00000540228 668 ntTSL 2 BASIC15.17■□□□□ 0.02
C1QTNF3-AMACRE9PGA6 EMC4-209ENST00000559421 497 ntTSL 2 BASIC15.17■□□□□ 0.02
C1QTNF3-AMACRE9PGA6 TUBB8-202ENST00000562809 820 ntTSL 5 BASIC15.17■□□□□ 0.02
C1QTNF3-AMACRE9PGA6 AC120498.1-201ENST00000563593 476 ntTSL 4 BASIC15.17■□□□□ 0.02
C1QTNF3-AMACRE9PGA6 AP003096.1-203ENST00000564469 563 ntTSL 3 BASIC15.17■□□□□ 0.02
C1QTNF3-AMACRE9PGA6 CRISPLD2-210ENST00000569090 808 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
C1QTNF3-AMACRE9PGA6 DHRS7C-202ENST00000571134 984 ntAPPRIS ALT1 TSL 1 (best) BASIC15.17■□□□□ 0.02
C1QTNF3-AMACRE9PGA6 AC004466.1-201ENST00000599515 1080 ntBASIC15.17■□□□□ 0.02
C1QTNF3-AMACRE9PGA6 AL118558.3-201ENST00000607414 1079 ntBASIC15.17■□□□□ 0.02
C1QTNF3-AMACRE9PGA6 AC005695.3-201ENST00000614522 232 ntBASIC15.17■□□□□ 0.02
C1QTNF3-AMACRE9PGA6 ADGRA1-AS1-201ENST00000366099 3236 ntBASIC15.17■□□□□ 0.02
C1QTNF3-AMACRE9PGA6 SLC2A13-201ENST00000280871 7003 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
C1QTNF3-AMACRE9PGA6 PHTF1-201ENST00000357783 2747 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
C1QTNF3-AMACRE9PGA6 PACS1-201ENST00000320580 4392 ntAPPRIS P2 TSL 1 (best) BASIC15.17■□□□□ 0.02
C1QTNF3-AMACRE9PGA6 MIR137HG-202ENST00000424528 2639 ntTSL 2 BASIC15.17■□□□□ 0.02
C1QTNF3-AMACRE9PGA6 SPRY1-207ENST00000610581 2608 ntAPPRIS P1 TSL 3 BASIC15.17■□□□□ 0.02
C1QTNF3-AMACRE9PGA6 AC007950.2-201ENST00000615045 2347 ntBASIC15.17■□□□□ 0.02
C1QTNF3-AMACRE9PGA6 ZNF821-203ENST00000446827 1822 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
C1QTNF3-AMACRE9PGA6 IFT140-201ENST00000361339 2987 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
C1QTNF3-AMACRE9PGA6 INPP5B-202ENST00000373023 4694 ntAPPRIS ALT2 TSL 5 BASIC15.17■□□□□ 0.02
C1QTNF3-AMACRE9PGA6 AL109910.1-201ENST00000452071 1330 ntTSL 2 BASIC15.17■□□□□ 0.02
C1QTNF3-AMACRE9PGA6 AC022400.6-201ENST00000603027 5818 ntAPPRIS P5 TSL 2 BASIC15.16■□□□□ 0.02
C1QTNF3-AMACRE9PGA6 ADRA1A-204ENST00000380573 2548 ntAPPRIS P1 TSL 2 BASIC15.16■□□□□ 0.02
C1QTNF3-AMACRE9PGA6 GCK-203ENST00000395796 2539 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
C1QTNF3-AMACRE9PGA6 SLC43A2-202ENST00000412517 1658 ntTSL 2 BASIC15.16■□□□□ 0.02
C1QTNF3-AMACRE9PGA6 CRISPLD2-203ENST00000564567 1651 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
C1QTNF3-AMACRE9PGA6 ARFIP1-204ENST00000429148 1599 ntTSL 2 BASIC15.16■□□□□ 0.02
C1QTNF3-AMACRE9PGA6 MROH1-209ENST00000534366 5092 ntAPPRIS ALT2 TSL 1 (best) BASIC15.16■□□□□ 0.02
C1QTNF3-AMACRE9PGA6 KRT8P4-201ENST00000509735 1454 ntBASIC15.16■□□□□ 0.02
C1QTNF3-AMACRE9PGA6 TBC1D17-202ENST00000535102 2025 ntTSL 2 BASIC15.16■□□□□ 0.02
C1QTNF3-AMACRE9PGA6 UPB1-202ENST00000382760 1928 ntTSL 5 BASIC15.16■□□□□ 0.02
C1QTNF3-AMACRE9PGA6 LILRP1-201ENST00000444199 1370 ntBASIC15.16■□□□□ 0.02
C1QTNF3-AMACRE9PGA6 FAM180B-201ENST00000538490 1388 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
C1QTNF3-AMACRE9PGA6 PIMREG-205ENST00000572447 1948 ntAPPRIS P3 TSL 1 (best) BASIC15.16■□□□□ 0.02
C1QTNF3-AMACRE9PGA6 MAPK8IP2-202ENST00000329492 3381 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
C1QTNF3-AMACRE9PGA6 LAMTOR4-201ENST00000341942 605 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
C1QTNF3-AMACRE9PGA6 AL451065.1-201ENST00000428958 238 ntTSL 5 BASIC15.16■□□□□ 0.02
Retrieved 100 of 98,524 protein–RNA pairs in 37.2 ms