Protein–RNA interactions for Protein: C9JG80

NPIPB4, Nuclear pore complex-interacting protein family member B4, humanhuman

Predictions only

Length 1,138 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NPIPB4C9JG80 AC092384.2-204ENST00000565053 2566 ntTSL 2 BASIC13.43□□□□□ -0.26
NPIPB4C9JG80 AC005912.2-201ENST00000619492 2400 ntBASIC13.43□□□□□ -0.26
NPIPB4C9JG80 ACBD5-202ENST00000375897 4173 ntAPPRIS ALT2 TSL 2 BASIC13.43□□□□□ -0.26
NPIPB4C9JG80 KLK15-201ENST00000326856 1389 ntAPPRIS ALT1 TSL 5 BASIC13.43□□□□□ -0.26
NPIPB4C9JG80 DDC-202ENST00000380984 1366 ntTSL 1 (best) BASIC13.43□□□□□ -0.26
NPIPB4C9JG80 ENOSF1-209ENST00000580982 1397 ntTSL 5 BASIC13.43□□□□□ -0.26
NPIPB4C9JG80 ORMDL3-202ENST00000394169 2230 ntAPPRIS P1 TSL 2 BASIC13.43□□□□□ -0.26
NPIPB4C9JG80 C16orf52-202ENST00000542527 4360 ntAPPRIS P1 TSL 5 BASIC13.43□□□□□ -0.26
NPIPB4C9JG80 TFAP2A-213ENST00000482890 2071 ntAPPRIS P3 TSL 5 BASIC13.43□□□□□ -0.26
NPIPB4C9JG80 PBX3-203ENST00000373487 2902 ntTSL 5 BASIC13.43□□□□□ -0.26
NPIPB4C9JG80 KIAA1211-203ENST00000504228 4628 ntAPPRIS P2 TSL 5 BASIC13.43□□□□□ -0.26
NPIPB4C9JG80 GABPB1-202ENST00000359031 1633 ntTSL 5 BASIC13.42□□□□□ -0.26
NPIPB4C9JG80 PCDHA4-203ENST00000530339 5251 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
NPIPB4C9JG80 SLC35G5-201ENST00000382435 1321 ntAPPRIS P1 BASIC13.42□□□□□ -0.26
NPIPB4C9JG80 KRT8P35-201ENST00000483942 1338 ntBASIC13.42□□□□□ -0.26
NPIPB4C9JG80 NEK2-201ENST00000366998 1865 ntTSL 1 (best) BASIC13.42□□□□□ -0.26
NPIPB4C9JG80 MAPK13-203ENST00000373766 6196 ntTSL 1 (best) BASIC13.42□□□□□ -0.26
NPIPB4C9JG80 FARP1-214ENST00000595437 4926 ntTSL 1 (best) BASIC13.42□□□□□ -0.26
NPIPB4C9JG80 ARHGEF6-202ENST00000370620 4764 ntTSL 2 BASIC13.42□□□□□ -0.26
NPIPB4C9JG80 CCP110-201ENST00000381396 5446 ntAPPRIS ALT1 TSL 1 (best) BASIC13.42□□□□□ -0.26
NPIPB4C9JG80 RHD-202ENST00000342055 1557 ntTSL 1 (best) BASIC13.42□□□□□ -0.26
NPIPB4C9JG80 YIPF3-202ENST00000372422 1576 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
NPIPB4C9JG80 COCH-202ENST00000396618 2536 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
NPIPB4C9JG80 RWDD1-202ENST00000466444 5522 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
NPIPB4C9JG80 HNRNPUL1-220ENST00000602130 2932 ntAPPRIS ALT2 TSL 1 (best) BASIC13.42□□□□□ -0.26
NPIPB4C9JG80 ZHX1-201ENST00000297857 5200 ntAPPRIS P1 TSL 5 BASIC13.42□□□□□ -0.26
NPIPB4C9JG80 AC015802.1-201ENST00000588104 1449 ntBASIC13.42□□□□□ -0.26
NPIPB4C9JG80 ATRNL1-201ENST00000355044 8479 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
NPIPB4C9JG80 PVR-202ENST00000344956 3166 ntAPPRIS ALT2 TSL 5 BASIC13.42□□□□□ -0.26
NPIPB4C9JG80 FBXO5-202ENST00000367241 2221 ntTSL 1 (best) BASIC13.42□□□□□ -0.26
NPIPB4C9JG80 APOA1-201ENST00000236850 1227 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
NPIPB4C9JG80 CLEC1B-201ENST00000298527 952 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
NPIPB4C9JG80 PPDPF-201ENST00000370177 627 ntTSL 2 BASIC13.42□□□□□ -0.26
NPIPB4C9JG80 PFDN6-202ENST00000374607 598 ntAPPRIS P1 TSL 2 BASIC13.42□□□□□ -0.26
NPIPB4C9JG80 PFDN6-203ENST00000374610 521 ntAPPRIS P1 TSL 2 BASIC13.42□□□□□ -0.26
NPIPB4C9JG80 APOA1-205ENST00000375329 927 ntTSL 2 BASIC13.42□□□□□ -0.26
NPIPB4C9JG80 RAC2-203ENST00000405484 842 ntAPPRIS ALT1 TSL 3 BASIC13.42□□□□□ -0.26
NPIPB4C9JG80 DGCR6-202ENST00000413981 1039 ntTSL 1 (best) BASIC13.42□□□□□ -0.26
NPIPB4C9JG80 GOLGA6L11P-201ENST00000417252 1298 ntBASIC13.42□□□□□ -0.26
NPIPB4C9JG80 PRAP1-201ENST00000433452 971 ntAPPRIS P3 TSL 1 (best) BASIC13.42□□□□□ -0.26
NPIPB4C9JG80 FAM104B-207ENST00000489298 712 ntAPPRIS ALT2 TSL 2 BASIC13.42□□□□□ -0.26
NPIPB4C9JG80 TERF1P3-201ENST00000505638 1227 ntBASIC13.42□□□□□ -0.26
NPIPB4C9JG80 GNLY-210ENST00000524600 750 ntAPPRIS ALT2 TSL 2 BASIC13.42□□□□□ -0.26
NPIPB4C9JG80 FAM212B-207ENST00000534365 1217 ntTSL 5 BASIC13.42□□□□□ -0.26
NPIPB4C9JG80 AC013451.1-201ENST00000554552 518 ntTSL 4 BASIC13.42□□□□□ -0.26
NPIPB4C9JG80 LINC00928-204ENST00000561201 1123 ntTSL 1 (best) BASIC13.42□□□□□ -0.26
NPIPB4C9JG80 TP53TG3HP-202ENST00000569755 579 ntBASIC13.42□□□□□ -0.26
NPIPB4C9JG80 AC129507.3-201ENST00000571512 913 ntTSL 2 BASIC13.42□□□□□ -0.26
NPIPB4C9JG80 PAM16-204ENST00000571941 674 ntTSL 3 BASIC13.42□□□□□ -0.26
NPIPB4C9JG80 CTBP2P3-201ENST00000585629 1255 ntBASIC13.42□□□□□ -0.26
NPIPB4C9JG80 PRCD-204ENST00000586148 630 ntAPPRIS P1 TSL 5 BASIC13.42□□□□□ -0.26
NPIPB4C9JG80 AC010327.1-201ENST00000587871 975 ntAPPRIS P1 TSL 5 BASIC13.42□□□□□ -0.26
NPIPB4C9JG80 AC008494.3-201ENST00000606615 944 ntBASIC13.42□□□□□ -0.26
NPIPB4C9JG80 WFDC1-204ENST00000613603 549 ntBASIC13.42□□□□□ -0.26
NPIPB4C9JG80 EIF6-209ENST00000621148 1054 ntAPPRIS P1 TSL 3 BASIC13.42□□□□□ -0.26
NPIPB4C9JG80 CU634019.7-201ENST00000624153 1185 ntBASIC13.42□□□□□ -0.26
NPIPB4C9JG80 FP236241.2-201ENST00000624906 1185 ntBASIC13.42□□□□□ -0.26
NPIPB4C9JG80 MAPT-201ENST00000262410 6762 ntAPPRIS P4 TSL 1 (best) BASIC13.42□□□□□ -0.26
NPIPB4C9JG80 TGFBR2-201ENST00000295754 4621 ntAPPRIS P3 TSL 1 (best) BASIC13.42□□□□□ -0.26
NPIPB4C9JG80 RTN4IP1-201ENST00000369063 1682 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
NPIPB4C9JG80 DDX1-201ENST00000233084 2739 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
NPIPB4C9JG80 FZD4-201ENST00000531380 7383 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
NPIPB4C9JG80 RASA1-201ENST00000274376 3752 ntAPPRIS P3 TSL 1 (best) BASIC13.42□□□□□ -0.26
NPIPB4C9JG80 TPM3-205ENST00000328159 1771 ntTSL 2 BASIC13.42□□□□□ -0.26
NPIPB4C9JG80 NEU3-206ENST00000532963 1643 ntTSL 2 BASIC13.42□□□□□ -0.26
NPIPB4C9JG80 PLXNC1-201ENST00000258526 7346 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
NPIPB4C9JG80 SYN1-201ENST00000295987 3299 ntAPPRIS P3 TSL 2 BASIC13.42□□□□□ -0.26
NPIPB4C9JG80 TMEM263-201ENST00000280756 3362 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
NPIPB4C9JG80 ST3GAL3-208ENST00000361392 2243 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
NPIPB4C9JG80 HCK-209ENST00000538448 2215 ntAPPRIS ALT2 TSL 2 BASIC13.41□□□□□ -0.26
NPIPB4C9JG80 DZIP1-203ENST00000361396 7418 ntAPPRIS ALT2 TSL 1 (best) BASIC13.41□□□□□ -0.26
NPIPB4C9JG80 SIN3B-202ENST00000379803 5129 ntAPPRIS P3 TSL 1 (best) BASIC13.41□□□□□ -0.26
NPIPB4C9JG80 TRMT11-201ENST00000334379 1565 ntAPPRIS P2 TSL 1 (best) BASIC13.41□□□□□ -0.26
NPIPB4C9JG80 NUP54-217ENST00000514987 1563 ntTSL 2 BASIC13.41□□□□□ -0.26
NPIPB4C9JG80 RSPO1-204ENST00000615459 2331 ntTSL 2 BASIC13.41□□□□□ -0.26
NPIPB4C9JG80 FAM160A2-203ENST00000524416 3327 ntTSL 2 BASIC13.41□□□□□ -0.26
NPIPB4C9JG80 TOB2-201ENST00000327492 4561 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
NPIPB4C9JG80 PCDHA3-202ENST00000532566 4594 ntBASIC13.41□□□□□ -0.26
NPIPB4C9JG80 TCF7-218ENST00000520958 1408 ntTSL 2 BASIC13.41□□□□□ -0.26
NPIPB4C9JG80 ESRRB-207ENST00000556177 1427 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
NPIPB4C9JG80 BUD31-201ENST00000222969 1035 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
NPIPB4C9JG80 AIP-201ENST00000279146 1221 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
NPIPB4C9JG80 LCN15-201ENST00000316144 762 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
NPIPB4C9JG80 SCGN-201ENST00000334979 704 ntTSL 1 (best) BASIC13.41□□□□□ -0.26
NPIPB4C9JG80 SPDYC-201ENST00000377185 991 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
NPIPB4C9JG80 AC236430.1-201ENST00000402231 743 ntBASIC13.41□□□□□ -0.26
NPIPB4C9JG80 AC007319.1-202ENST00000412276 829 ntTSL 5 BASIC13.41□□□□□ -0.26
NPIPB4C9JG80 CDRT15-201ENST00000420162 766 ntAPPRIS P2 TSL 1 (best) BASIC13.41□□□□□ -0.26
NPIPB4C9JG80 CDRT15-202ENST00000431716 655 ntAPPRIS ALT2 TSL 1 (best) BASIC13.41□□□□□ -0.26
NPIPB4C9JG80 AC007969.1-201ENST00000433675 447 ntBASIC13.41□□□□□ -0.26
NPIPB4C9JG80 HCST-202ENST00000437550 445 ntAPPRIS ALT2 TSL 1 (best) BASIC13.41□□□□□ -0.26
NPIPB4C9JG80 LINC01784-201ENST00000438401 378 ntTSL 2 BASIC13.41□□□□□ -0.26
NPIPB4C9JG80 AC140481.1-201ENST00000448777 706 ntTSL 3 BASIC13.41□□□□□ -0.26
NPIPB4C9JG80 SERF1A-205ENST00000507348 663 ntTSL 2 BASIC13.41□□□□□ -0.26
NPIPB4C9JG80 AC093879.1-201ENST00000508959 1176 ntTSL 2 BASIC13.41□□□□□ -0.26
NPIPB4C9JG80 AC006064.3-201ENST00000537921 477 ntTSL 4 BASIC13.41□□□□□ -0.26
NPIPB4C9JG80 AP000808.2-201ENST00000542410 569 ntTSL 4 BASIC13.41□□□□□ -0.26
NPIPB4C9JG80 ZNF180-204ENST00000586637 1023 ntTSL 5 BASIC13.41□□□□□ -0.26
NPIPB4C9JG80 AC233723.1-201ENST00000635921 386 ntAPPRIS P1 TSL 5 BASIC13.41□□□□□ -0.26
NPIPB4C9JG80 STAMBPL1-204ENST00000371927 4184 ntTSL 2 BASIC13.41□□□□□ -0.26
Retrieved 100 of 98,524 protein–RNA pairs in 75.9 ms