Protein–RNA interactions for Protein: A6NGU7

LINC01546, Putative uncharacterized protein encoded by LINC01546, humanhuman

Predictions only

Length 62 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01546A6NGU7 SDR39U1-212ENST00000555365 976 ntTSL 3 BASIC10.71□□□□□ -0.69
LINC01546A6NGU7 TRIM69-206ENST00000559390 2486 ntAPPRIS P1 TSL 2 BASIC10.71□□□□□ -0.69
LINC01546A6NGU7 HACD3-206ENST00000565299 1465 ntTSL 5 BASIC10.71□□□□□ -0.69
LINC01546A6NGU7 AC005606.1-201ENST00000567515 504 ntTSL 5 BASIC10.71□□□□□ -0.69
LINC01546A6NGU7 MAGEA2-202ENST00000598543 1662 ntAPPRIS P1 TSL 1 (best) BASIC10.71□□□□□ -0.69
LINC01546A6NGU7 TP73-209ENST00000603362 1668 ntTSL 5 BASIC10.71□□□□□ -0.69
LINC01546A6NGU7 IFNL4P1-201ENST00000607083 540 ntBASIC10.71□□□□□ -0.69
LINC01546A6NGU7 DHRS7-212ENST00000611054 1321 ntTSL 5 BASIC10.71□□□□□ -0.69
LINC01546A6NGU7 FDFT1-223ENST00000615631 2462 ntAPPRIS P1 TSL 5 BASIC10.71□□□□□ -0.69
LINC01546A6NGU7 C18orf25-206ENST00000619301 5264 ntTSL 1 (best) BASIC10.71□□□□□ -0.69
LINC01546A6NGU7 MYH14-210ENST00000601313 6896 ntAPPRIS ALT2 TSL 1 (best) BASIC10.71□□□□□ -0.7
LINC01546A6NGU7 SBF1P1-201ENST00000444527 5631 ntBASIC10.71□□□□□ -0.7
LINC01546A6NGU7 FAM8A1-201ENST00000259963 4677 ntAPPRIS P1 TSL 1 (best) BASIC10.71□□□□□ -0.7
LINC01546A6NGU7 ZNF800-201ENST00000265827 4203 ntAPPRIS P1 TSL 1 (best) BASIC10.71□□□□□ -0.7
LINC01546A6NGU7 ANKRD18A-201ENST00000399703 4041 ntAPPRIS P1 TSL 1 (best) BASIC10.71□□□□□ -0.7
LINC01546A6NGU7 FAM160A2-202ENST00000449352 3354 ntAPPRIS ALT1 TSL 1 (best) BASIC10.71□□□□□ -0.7
LINC01546A6NGU7 RUBCNL-201ENST00000378781 3322 ntAPPRIS ALT2 TSL 2 BASIC10.71□□□□□ -0.7
LINC01546A6NGU7 SEC63-201ENST00000369002 6411 ntAPPRIS P1 TSL 1 (best) BASIC10.71□□□□□ -0.7
LINC01546A6NGU7 PLCD4-202ENST00000417849 2738 ntAPPRIS P2 TSL 5 BASIC10.71□□□□□ -0.7
LINC01546A6NGU7 INMT-201ENST00000013222 2559 ntAPPRIS P3 TSL 1 (best) BASIC10.71□□□□□ -0.7
LINC01546A6NGU7 CCNY-201ENST00000265375 4768 ntAPPRIS ALT1 TSL 1 (best) BASIC10.7□□□□□ -0.7
LINC01546A6NGU7 CHIT1-202ENST00000367229 2246 ntAPPRIS P1 TSL 1 (best) BASIC10.7□□□□□ -0.7
LINC01546A6NGU7 NPNT-211ENST00000506666 2187 ntTSL 2 BASIC10.7□□□□□ -0.7
LINC01546A6NGU7 PCGF2-202ENST00000611883 2179 ntAPPRIS P1 TSL 1 (best) BASIC10.7□□□□□ -0.7
LINC01546A6NGU7 PKIA-202ENST00000396418 4163 ntAPPRIS P1 TSL 2 BASIC10.7□□□□□ -0.7
LINC01546A6NGU7 ITPK1-201ENST00000267615 6066 ntAPPRIS P1 TSL 1 (best) BASIC10.7□□□□□ -0.7
LINC01546A6NGU7 GNG4-202ENST00000366598 1721 ntAPPRIS P1 TSL 1 (best) BASIC10.7□□□□□ -0.7
LINC01546A6NGU7 OTUD6A-201ENST00000338352 1689 ntAPPRIS P1 BASIC10.7□□□□□ -0.7
LINC01546A6NGU7 PITPNM2-208ENST00000542749 6660 ntAPPRIS P3 TSL 1 (best) BASIC10.7□□□□□ -0.7
LINC01546A6NGU7 MPDU1-201ENST00000250124 1601 ntAPPRIS P1 TSL 1 (best) BASIC10.7□□□□□ -0.7
LINC01546A6NGU7 AUTS2-217ENST00000611706 4583 ntTSL 5 BASIC10.7□□□□□ -0.7
LINC01546A6NGU7 ZSWIM8-AS1-201ENST00000456638 1460 ntTSL 1 (best) BASIC10.7□□□□□ -0.7
LINC01546A6NGU7 OSBP2-201ENST00000332585 4340 ntAPPRIS P3 TSL 1 (best) BASIC10.7□□□□□ -0.7
LINC01546A6NGU7 ATG10-202ENST00000355178 1438 ntTSL 2 BASIC10.7□□□□□ -0.7
LINC01546A6NGU7 TEX44-201ENST00000313965 1383 ntAPPRIS P1 BASIC10.7□□□□□ -0.7
LINC01546A6NGU7 TATDN3-214ENST00000532324 1381 ntTSL 2 BASIC10.7□□□□□ -0.7
LINC01546A6NGU7 TM2D1-201ENST00000294613 1250 ntAPPRIS P1 TSL 1 (best) BASIC10.7□□□□□ -0.7
LINC01546A6NGU7 MRPL13-201ENST00000306185 1086 ntAPPRIS P1 TSL 1 (best) BASIC10.7□□□□□ -0.7
LINC01546A6NGU7 SSNA1-201ENST00000322310 896 ntAPPRIS P1 TSL 1 (best) BASIC10.7□□□□□ -0.7
LINC01546A6NGU7 FGFR1-201ENST00000326324 3816 ntTSL 1 (best) BASIC10.7□□□□□ -0.7
LINC01546A6NGU7 FGFR1-204ENST00000356207 3824 ntTSL 1 (best) BASIC10.7□□□□□ -0.7
LINC01546A6NGU7 MIR346-201ENST00000362234 95 ntBASIC10.7□□□□□ -0.7
LINC01546A6NGU7 TM2D1-204ENST00000371180 1248 ntTSL 5 BASIC10.7□□□□□ -0.7
LINC01546A6NGU7 NDUFA4L2-201ENST00000393825 1186 ntAPPRIS P1 TSL 1 (best) BASIC10.7□□□□□ -0.7
LINC01546A6NGU7 DHRS4-203ENST00000397075 727 ntTSL 2 BASIC10.7□□□□□ -0.7
LINC01546A6NGU7 ITGB2-204ENST00000397846 422 ntTSL 2 BASIC10.7□□□□□ -0.7
LINC01546A6NGU7 AC211429.1-201ENST00000415277 523 ntBASIC10.7□□□□□ -0.7
LINC01546A6NGU7 AC074338.1-201ENST00000416825 156 ntBASIC10.7□□□□□ -0.7
LINC01546A6NGU7 DNAJB6-209ENST00000443280 1159 ntTSL 2 BASIC10.7□□□□□ -0.7
LINC01546A6NGU7 PPP1R14B-203ENST00000542235 920 ntTSL 1 (best) BASIC10.7□□□□□ -0.7
LINC01546A6NGU7 CSRP2-202ENST00000546966 754 ntAPPRIS P1 TSL 3 BASIC10.7□□□□□ -0.7
LINC01546A6NGU7 NDUFA4L2-206ENST00000556732 883 ntTSL 3 BASIC10.7□□□□□ -0.7
LINC01546A6NGU7 AC091304.2-201ENST00000564639 760 ntBASIC10.7□□□□□ -0.7
LINC01546A6NGU7 AC009065.5-201ENST00000565937 596 ntTSL 3 BASIC10.7□□□□□ -0.7
LINC01546A6NGU7 CHRNB1-207ENST00000575379 1095 ntTSL 2 BASIC10.7□□□□□ -0.7
LINC01546A6NGU7 AC012615.3-201ENST00000592884 500 ntTSL 3 BASIC10.7□□□□□ -0.7
LINC01546A6NGU7 AC092364.2-202ENST00000597012 1073 ntBASIC10.7□□□□□ -0.7
LINC01546A6NGU7 TM2D1-212ENST00000606498 969 ntAPPRIS P1 TSL 5 BASIC10.7□□□□□ -0.7
LINC01546A6NGU7 AP000547.2-201ENST00000609641 661 ntTSL 5 BASIC10.7□□□□□ -0.7
LINC01546A6NGU7 UBE3D-208ENST00000626828 114 ntTSL 5 BASIC10.7□□□□□ -0.7
LINC01546A6NGU7 AAR2-201ENST00000320849 2430 ntAPPRIS P1 TSL 1 (best) BASIC10.7□□□□□ -0.7
LINC01546A6NGU7 AGAP10P-201ENST00000454844 2418 ntBASIC10.7□□□□□ -0.7
LINC01546A6NGU7 UBE4B-201ENST00000253251 4772 ntAPPRIS P1 TSL 1 (best) BASIC10.7□□□□□ -0.7
LINC01546A6NGU7 FAN1-207ENST00000565466 2304 ntTSL 2 BASIC10.7□□□□□ -0.7
LINC01546A6NGU7 MEFV-201ENST00000219596 3499 ntAPPRIS P2 TSL 1 (best) BASIC10.7□□□□□ -0.7
LINC01546A6NGU7 WDR81-202ENST00000409644 6733 ntAPPRIS P1 TSL 1 (best) BASIC10.7□□□□□ -0.7
LINC01546A6NGU7 PPM1F-203ENST00000407142 5587 ntAPPRIS ALT2 TSL 5 BASIC10.7□□□□□ -0.7
LINC01546A6NGU7 GEM-201ENST00000297596 2208 ntAPPRIS P1 TSL 1 (best) BASIC10.7□□□□□ -0.7
LINC01546A6NGU7 NCF2-201ENST00000367535 2226 ntAPPRIS P1 TSL 1 (best) BASIC10.7□□□□□ -0.7
LINC01546A6NGU7 SOX21-AS1-201ENST00000438290 3287 ntTSL 2 BASIC10.7□□□□□ -0.7
LINC01546A6NGU7 CYP4B1-201ENST00000271153 2171 ntAPPRIS P3 TSL 1 (best) BASIC10.7□□□□□ -0.7
LINC01546A6NGU7 ARMCX1-201ENST00000372829 2141 ntAPPRIS P1 TSL 1 (best) BASIC10.7□□□□□ -0.7
LINC01546A6NGU7 CFAP43-201ENST00000278064 2963 ntTSL 1 (best) BASIC10.7□□□□□ -0.7
LINC01546A6NGU7 GFOD2-203ENST00000602377 1991 ntTSL 4 BASIC10.7□□□□□ -0.7
LINC01546A6NGU7 RHPN1-AS1-201ENST00000518049 1918 ntBASIC10.7□□□□□ -0.7
LINC01546A6NGU7 STRADA-243ENST00000640086 1925 ntTSL 5 BASIC10.7□□□□□ -0.7
LINC01546A6NGU7 LIMD1-202ENST00000440097 2773 ntTSL 5 BASIC10.7□□□□□ -0.7
LINC01546A6NGU7 WIZ-207ENST00000599910 4609 ntAPPRIS ALT2 TSL 5 BASIC10.7□□□□□ -0.7
LINC01546A6NGU7 APBB3-202ENST00000356738 1804 ntTSL 1 (best) BASIC10.7□□□□□ -0.7
LINC01546A6NGU7 GSN-209ENST00000449733 2702 ntTSL 2 BASIC10.7□□□□□ -0.7
LINC01546A6NGU7 ABCG8-201ENST00000272286 2665 ntAPPRIS P1 TSL 1 (best) BASIC10.7□□□□□ -0.7
LINC01546A6NGU7 AAR2-202ENST00000373932 2689 ntAPPRIS P1 TSL 1 (best) BASIC10.7□□□□□ -0.7
LINC01546A6NGU7 ZMYND10-202ENST00000360165 1757 ntAPPRIS ALT1 TSL 1 (best) BASIC10.7□□□□□ -0.7
LINC01546A6NGU7 EGLN1-201ENST00000366641 7097 ntAPPRIS P1 TSL 1 (best) BASIC10.7□□□□□ -0.7
LINC01546A6NGU7 ZNF607-201ENST00000355202 4364 ntAPPRIS P3 TSL 2 BASIC10.7□□□□□ -0.7
LINC01546A6NGU7 TMEM100-201ENST00000424486 1747 ntAPPRIS P1 TSL 1 (best) BASIC10.7□□□□□ -0.7
LINC01546A6NGU7 HPD-204ENST00000543163 1709 ntTSL 5 BASIC10.7□□□□□ -0.7
LINC01546A6NGU7 B4GALNT3-201ENST00000266383 5068 ntAPPRIS P1 TSL 1 (best) BASIC10.69□□□□□ -0.7
LINC01546A6NGU7 PCDHB3-201ENST00000231130 3355 ntAPPRIS P1 BASIC10.69□□□□□ -0.7
LINC01546A6NGU7 COPS7B-224ENST00000620578 2500 ntTSL 2 BASIC10.69□□□□□ -0.7
LINC01546A6NGU7 DUOXA1-205ENST00000558422 1678 ntTSL 1 (best) BASIC10.69□□□□□ -0.7
LINC01546A6NGU7 LINC01864-201ENST00000587218 1661 ntTSL 1 (best) BASIC10.69□□□□□ -0.7
LINC01546A6NGU7 MYCN-202ENST00000638417 1693 ntTSL 2 BASIC10.69□□□□□ -0.7
LINC01546A6NGU7 NLRP2B-201ENST00000434992 3194 ntAPPRIS P1 BASIC10.69□□□□□ -0.7
LINC01546A6NGU7 SPRY1-208ENST00000622283 2352 ntAPPRIS P1 TSL 2 BASIC10.69□□□□□ -0.7
LINC01546A6NGU7 RILPL1-202ENST00000376874 3932 ntAPPRIS P1 TSL 1 (best) BASIC10.69□□□□□ -0.7
LINC01546A6NGU7 TSR2-201ENST00000375151 1534 ntAPPRIS P1 TSL 1 (best) BASIC10.69□□□□□ -0.7
LINC01546A6NGU7 SAFB-211ENST00000592224 3014 ntAPPRIS ALT2 TSL 1 (best) BASIC10.69□□□□□ -0.7
LINC01546A6NGU7 VASH2-202ENST00000366964 2960 ntTSL 5 BASIC10.69□□□□□ -0.7
LINC01546A6NGU7 NFATC2-203ENST00000414705 2974 ntAPPRIS ALT2 TSL 1 (best) BASIC10.69□□□□□ -0.7
Retrieved 100 of 98,524 protein–RNA pairs in 31.7 ms