Protein–RNA interactions for Protein: A6NEF3

GOLGA6L4, Golgin subfamily A member 6-like protein 4, humanhuman

Predictions only

Length 574 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GOLGA6L4A6NEF3 EFNA4-201ENST00000359751 1096 ntAPPRIS ALT2 TSL 1 (best) BASIC17.66■□□□□ 0.42
GOLGA6L4A6NEF3 PNRC2-202ENST00000374468 814 ntAPPRIS P1 TSL 2 BASIC17.66■□□□□ 0.42
GOLGA6L4A6NEF3 CD28-203ENST00000458610 705 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
GOLGA6L4A6NEF3 AC005829.1-201ENST00000570002 483 ntBASIC17.66■□□□□ 0.42
GOLGA6L4A6NEF3 TVP23B-206ENST00000574226 1080 ntAPPRIS ALT1 TSL 1 (best) BASIC17.66■□□□□ 0.42
GOLGA6L4A6NEF3 AC103808.2-201ENST00000582755 594 ntTSL 4 BASIC17.66■□□□□ 0.42
GOLGA6L4A6NEF3 FSTL3-207ENST00000605925 748 ntTSL 4 BASIC17.66■□□□□ 0.42
GOLGA6L4A6NEF3 ASIC4-201ENST00000347842 2684 ntAPPRIS P2 TSL 1 (best) BASIC17.66■□□□□ 0.42
GOLGA6L4A6NEF3 GRIN1-203ENST00000371550 3940 ntTSL 5 BASIC17.66■□□□□ 0.42
GOLGA6L4A6NEF3 TUBA3E-201ENST00000312988 1542 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
GOLGA6L4A6NEF3 PSD-209ENST00000611678 3382 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
GOLGA6L4A6NEF3 SLC44A2-201ENST00000335757 3671 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
GOLGA6L4A6NEF3 RAB1A-203ENST00000409784 2447 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
GOLGA6L4A6NEF3 NOX3-201ENST00000159060 2042 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
GOLGA6L4A6NEF3 POFUT1-202ENST00000375749 5235 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
GOLGA6L4A6NEF3 ZBTB14-202ENST00000400143 1814 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
GOLGA6L4A6NEF3 C5orf66-206ENST00000624272 2479 ntTSL 2 BASIC17.65■□□□□ 0.42
GOLGA6L4A6NEF3 TPD52L2-202ENST00000346249 2297 ntAPPRIS ALT1 TSL 1 (best) BASIC17.65■□□□□ 0.42
GOLGA6L4A6NEF3 NME7-201ENST00000367811 1642 ntAPPRIS P3 TSL 1 (best) BASIC17.65■□□□□ 0.42
GOLGA6L4A6NEF3 UBTF-204ENST00000436088 2738 ntAPPRIS P1 TSL 2 BASIC17.65■□□□□ 0.42
GOLGA6L4A6NEF3 C5orf38-207ENST00000515640 1441 ntAPPRIS ALT2 TSL 3 BASIC17.65■□□□□ 0.42
GOLGA6L4A6NEF3 PIDD1-201ENST00000347755 2998 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
GOLGA6L4A6NEF3 ARHGEF26-AS1-204ENST00000491862 2598 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
GOLGA6L4A6NEF3 USP10-201ENST00000219473 3009 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
GOLGA6L4A6NEF3 NFS1-203ENST00000374092 3012 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
GOLGA6L4A6NEF3 ZNF800-203ENST00000393313 4358 ntAPPRIS P1 TSL 5 BASIC17.65■□□□□ 0.42
GOLGA6L4A6NEF3 ATXN2L-204ENST00000382686 3739 ntAPPRIS ALT2 TSL 1 (best) BASIC17.65■□□□□ 0.42
GOLGA6L4A6NEF3 COX10-AS1-202ENST00000449363 1944 ntTSL 2 BASIC17.65■□□□□ 0.42
GOLGA6L4A6NEF3 RIBC2-202ENST00000614167 1479 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
GOLGA6L4A6NEF3 CPSF7-205ENST00000439958 3524 ntAPPRIS ALT1 TSL 1 (best) BASIC17.65■□□□□ 0.42
GOLGA6L4A6NEF3 NUP153-203ENST00000613258 5811 ntAPPRIS ALT2 TSL 1 (best) BASIC17.65■□□□□ 0.42
GOLGA6L4A6NEF3 TRAPPC1-201ENST00000303731 811 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
GOLGA6L4A6NEF3 C14orf178-201ENST00000355883 642 ntAPPRIS P3 TSL 5 BASIC17.65■□□□□ 0.42
GOLGA6L4A6NEF3 RPP38-203ENST00000378202 1030 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
GOLGA6L4A6NEF3 NKIRAS1-204ENST00000416026 795 ntAPPRIS P2 TSL 3 BASIC17.65■□□□□ 0.42
GOLGA6L4A6NEF3 AL627223.1-201ENST00000416693 442 ntBASIC17.65■□□□□ 0.42
GOLGA6L4A6NEF3 LINC00404-201ENST00000418660 428 ntTSL 2 BASIC17.65■□□□□ 0.42
GOLGA6L4A6NEF3 AL022341.1-201ENST00000455294 389 ntTSL 2 BASIC17.65■□□□□ 0.42
GOLGA6L4A6NEF3 PFN2-205ENST00000461868 613 ntTSL 2 BASIC17.65■□□□□ 0.42
GOLGA6L4A6NEF3 POLD2P1-201ENST00000511220 997 ntBASIC17.65■□□□□ 0.42
GOLGA6L4A6NEF3 TATDN3-212ENST00000530441 492 ntTSL 3 BASIC17.65■□□□□ 0.42
GOLGA6L4A6NEF3 TRMT112-203ENST00000535750 823 ntTSL 2 BASIC17.65■□□□□ 0.42
GOLGA6L4A6NEF3 DCTPP1-203ENST00000567983 801 ntTSL 5 BASIC17.65■□□□□ 0.42
GOLGA6L4A6NEF3 SNHG15-206ENST00000580528 1073 ntTSL 2 BASIC17.65■□□□□ 0.42
GOLGA6L4A6NEF3 UBL5-208ENST00000593087 320 ntTSL 3 BASIC17.65■□□□□ 0.42
GOLGA6L4A6NEF3 AQP12B-206ENST00000621682 1080 ntAPPRIS ALT2 TSL 5 BASIC17.65■□□□□ 0.42
GOLGA6L4A6NEF3 SLC27A3-201ENST00000271857 3351 ntAPPRIS ALT2 TSL 1 (best) BASIC17.65■□□□□ 0.42
GOLGA6L4A6NEF3 AC005622.1-202ENST00000637093 1543 ntTSL 5 BASIC17.65■□□□□ 0.42
GOLGA6L4A6NEF3 UACA-201ENST00000322954 6939 ntAPPRIS P3 TSL 1 (best) BASIC17.65■□□□□ 0.42
GOLGA6L4A6NEF3 GORASP2-201ENST00000234160 3173 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
GOLGA6L4A6NEF3 TMEM2-202ENST00000377044 6523 ntAPPRIS P3 TSL 1 (best) BASIC17.65■□□□□ 0.42
GOLGA6L4A6NEF3 ATRN-202ENST00000446916 3921 ntAPPRIS ALT2 TSL 1 (best) BASIC17.65■□□□□ 0.42
GOLGA6L4A6NEF3 MTCL1-202ENST00000359865 6093 ntAPPRIS P2 TSL 2 BASIC17.65■□□□□ 0.42
GOLGA6L4A6NEF3 ANKRD13B-201ENST00000394859 3214 ntAPPRIS P1 TSL 2 BASIC17.65■□□□□ 0.42
GOLGA6L4A6NEF3 RNPS1-216ENST00000565678 2298 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
GOLGA6L4A6NEF3 TNS2-202ENST00000314276 4944 ntAPPRIS P4 TSL 1 (best) BASIC17.65■□□□□ 0.42
GOLGA6L4A6NEF3 PRKD2-206ENST00000595515 3012 ntTSL 2 BASIC17.65■□□□□ 0.42
GOLGA6L4A6NEF3 SPECC1L-ADORA2A-201ENST00000358654 6204 ntAPPRIS P1 TSL 2 BASIC17.65■□□□□ 0.42
GOLGA6L4A6NEF3 DUS2-207ENST00000565263 2310 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
GOLGA6L4A6NEF3 PLXNB2-201ENST00000359337 6335 ntAPPRIS P1 TSL 5 BASIC17.65■□□□□ 0.42
GOLGA6L4A6NEF3 GADD45B-201ENST00000215631 1373 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
GOLGA6L4A6NEF3 RNF122-201ENST00000256257 1868 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
GOLGA6L4A6NEF3 GPC3-202ENST00000394299 2379 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
GOLGA6L4A6NEF3 FCHSD2-204ENST00000409418 3154 ntAPPRIS P1 TSL 2 BASIC17.65■□□□□ 0.42
GOLGA6L4A6NEF3 ZNF32-AS3-201ENST00000458063 1932 ntTSL 1 (best) BASIC17.64■□□□□ 0.42
GOLGA6L4A6NEF3 BX640514.1-201ENST00000583223 1918 ntBASIC17.64■□□□□ 0.42
GOLGA6L4A6NEF3 REXO1L4P-201ENST00000605109 1937 ntBASIC17.64■□□□□ 0.42
GOLGA6L4A6NEF3 BBS1-225ENST00000630659 1934 ntTSL 5 BASIC17.64■□□□□ 0.42
GOLGA6L4A6NEF3 DEK-201ENST00000244776 1441 ntTSL 2 BASIC17.64■□□□□ 0.42
GOLGA6L4A6NEF3 FGFR1-201ENST00000326324 3816 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
GOLGA6L4A6NEF3 TRNT1-201ENST00000251607 2276 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
GOLGA6L4A6NEF3 FHL2-201ENST00000322142 1462 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
GOLGA6L4A6NEF3 EGOT-201ENST00000414938 1464 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
GOLGA6L4A6NEF3 ZBTB45P1-201ENST00000452761 1456 ntBASIC17.64■□□□□ 0.41
GOLGA6L4A6NEF3 EHF-210ENST00000531794 1481 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
GOLGA6L4A6NEF3 ACIN1-203ENST00000357481 2563 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
GOLGA6L4A6NEF3 GLIPR1L2-204ENST00000550916 2609 ntAPPRIS ALT2 TSL 1 (best) BASIC17.64■□□□□ 0.41
GOLGA6L4A6NEF3 MPI-203ENST00000535694 1523 ntTSL 2 BASIC17.64■□□□□ 0.41
GOLGA6L4A6NEF3 ACVR1B-206ENST00000542485 2362 ntTSL 2 BASIC17.64■□□□□ 0.41
GOLGA6L4A6NEF3 PFN4-201ENST00000313213 974 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
GOLGA6L4A6NEF3 H1FOO-201ENST00000324382 1067 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
GOLGA6L4A6NEF3 ITLN1-201ENST00000326245 1183 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
GOLGA6L4A6NEF3 SPOCK3-201ENST00000357154 2986 ntAPPRIS ALT2 TSL 5 BASIC17.64■□□□□ 0.41
GOLGA6L4A6NEF3 PDSS2-201ENST00000369031 1236 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
GOLGA6L4A6NEF3 SNHG17-203ENST00000417578 880 ntTSL 2 BASIC17.64■□□□□ 0.41
GOLGA6L4A6NEF3 RPP21-221ENST00000428040 594 ntTSL 2 BASIC17.64■□□□□ 0.41
GOLGA6L4A6NEF3 SEC24B-AS1-203ENST00000505895 800 ntTSL 4 BASIC17.64■□□□□ 0.41
GOLGA6L4A6NEF3 PGAM5P1-201ENST00000518923 814 ntBASIC17.64■□□□□ 0.41
GOLGA6L4A6NEF3 CNOT8-210ENST00000519404 945 ntTSL 2 BASIC17.64■□□□□ 0.41
GOLGA6L4A6NEF3 CNOT8-214ENST00000520671 923 ntTSL 2 BASIC17.64■□□□□ 0.41
GOLGA6L4A6NEF3 CNOT8-218ENST00000521583 1151 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
GOLGA6L4A6NEF3 SPCS2-202ENST00000526361 772 ntTSL 2 BASIC17.64■□□□□ 0.41
GOLGA6L4A6NEF3 NDUFS7-216ENST00000546283 1060 ntTSL 2 BASIC17.64■□□□□ 0.41
GOLGA6L4A6NEF3 PDZD7-206ENST00000619208 4135 ntAPPRIS P1 TSL 5 BASIC17.64■□□□□ 0.41
GOLGA6L4A6NEF3 RPS6KC1-208ENST00000614059 4188 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
GOLGA6L4A6NEF3 TMCC2-202ENST00000330675 2780 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
GOLGA6L4A6NEF3 AC011455.3-201ENST00000599996 1967 ntAPPRIS P1 TSL 2 BASIC17.64■□□□□ 0.41
GOLGA6L4A6NEF3 SF1-209ENST00000433274 2317 ntTSL 2 BASIC17.64■□□□□ 0.41
GOLGA6L4A6NEF3 RILPL1-202ENST00000376874 3932 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
GOLGA6L4A6NEF3 COL4A1-201ENST00000375820 6532 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Retrieved 100 of 98,524 protein–RNA pairs in 123 ms