Protein–RNA interactions for Protein: A0A5B6

TCRBV3S1, T-cell receptor beta variable 28 (Fragment), humanhuman

Predictions only

Length 114 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TCRBV3S1A0A5B6 THBS4-201ENST00000350881 3222 ntAPPRIS P3 TSL 1 (best) BASIC14.24□□□□□ -0.13
TCRBV3S1A0A5B6 POLR3D-202ENST00000397802 5494 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
TCRBV3S1A0A5B6 CR382287.2-201ENST00000623370 1942 ntTSL 2 BASIC14.24□□□□□ -0.13
TCRBV3S1A0A5B6 ZNF747-202ENST00000395094 3504 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
TCRBV3S1A0A5B6 GPR132-202ENST00000392585 2887 ntAPPRIS ALT2 TSL 1 (best) BASIC14.24□□□□□ -0.13
TCRBV3S1A0A5B6 NBL1-201ENST00000289749 731 ntAPPRIS ALT2 TSL 2 BASIC14.24□□□□□ -0.13
TCRBV3S1A0A5B6 ISCA2-201ENST00000298818 851 ntTSL 5 BASIC14.24□□□□□ -0.13
TCRBV3S1A0A5B6 TMEM270-201ENST00000320531 854 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
TCRBV3S1A0A5B6 MAL-203ENST00000353004 873 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
TCRBV3S1A0A5B6 AL359764.1-201ENST00000444330 504 ntTSL 3 BASIC14.24□□□□□ -0.13
TCRBV3S1A0A5B6 OR10S1-201ENST00000531945 1121 ntAPPRIS P2 BASIC14.24□□□□□ -0.13
TCRBV3S1A0A5B6 HIST4H4-204ENST00000539745 577 ntAPPRIS P1 BASIC14.24□□□□□ -0.13
TCRBV3S1A0A5B6 BRF1-219ENST00000551787 824 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
TCRBV3S1A0A5B6 AL049869.3-201ENST00000554918 558 ntTSL 3 BASIC14.24□□□□□ -0.13
TCRBV3S1A0A5B6 C14orf178-204ENST00000557011 474 ntAPPRIS ALT2 TSL 1 (best) BASIC14.24□□□□□ -0.13
TCRBV3S1A0A5B6 AC087741.1-202ENST00000573346 801 ntTSL 3 BASIC14.24□□□□□ -0.13
TCRBV3S1A0A5B6 CUEDC1-207ENST00000577840 875 ntTSL 5 BASIC14.24□□□□□ -0.13
TCRBV3S1A0A5B6 DM1-AS-201ENST00000586251 483 ntTSL 2 BASIC14.24□□□□□ -0.13
TCRBV3S1A0A5B6 ZSCAN1-203ENST00000601162 813 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
TCRBV3S1A0A5B6 AL445228.2-201ENST00000605589 952 ntBASIC14.24□□□□□ -0.13
TCRBV3S1A0A5B6 AC074044.1-201ENST00000609673 707 ntBASIC14.24□□□□□ -0.13
TCRBV3S1A0A5B6 SELENOM-210ENST00000611680 689 ntAPPRIS ALT2 TSL 5 BASIC14.24□□□□□ -0.13
TCRBV3S1A0A5B6 OR10S1-202ENST00000641123 1121 ntAPPRIS ALT2 BASIC14.24□□□□□ -0.13
TCRBV3S1A0A5B6 DMTN-209ENST00000517600 1569 ntTSL 5 BASIC14.24□□□□□ -0.13
TCRBV3S1A0A5B6 STAC3-206ENST00000554578 1580 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
TCRBV3S1A0A5B6 MFSD11-217ENST00000590514 1891 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
TCRBV3S1A0A5B6 TUBA3E-201ENST00000312988 1542 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
TCRBV3S1A0A5B6 NBEAL2-205ENST00000450053 8827 ntAPPRIS P1 TSL 2 BASIC14.24□□□□□ -0.13
TCRBV3S1A0A5B6 POLN-210ENST00000511885 3253 ntAPPRIS P1 TSL 5 BASIC14.24□□□□□ -0.13
TCRBV3S1A0A5B6 PTPRF-201ENST00000359947 7727 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
TCRBV3S1A0A5B6 CEP295NL-201ENST00000322630 2090 ntTSL 2 BASIC14.24□□□□□ -0.13
TCRBV3S1A0A5B6 ALDH1A3-202ENST00000346623 3104 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
TCRBV3S1A0A5B6 SPEG-201ENST00000312358 10782 ntAPPRIS P1 TSL 5 BASIC14.24□□□□□ -0.13
TCRBV3S1A0A5B6 TP73-209ENST00000603362 1668 ntTSL 5 BASIC14.23□□□□□ -0.13
TCRBV3S1A0A5B6 AVL9-201ENST00000318709 6982 ntAPPRIS P1 TSL 2 BASIC14.23□□□□□ -0.13
TCRBV3S1A0A5B6 LIPA-202ENST00000336233 2782 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
TCRBV3S1A0A5B6 MAU2-201ENST00000262815 4994 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
TCRBV3S1A0A5B6 FAM8A1-201ENST00000259963 4677 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
TCRBV3S1A0A5B6 B4GALT3-201ENST00000319769 1911 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
TCRBV3S1A0A5B6 IRF2BP2-201ENST00000366609 4663 ntAPPRIS P3 TSL 1 (best) BASIC14.23□□□□□ -0.13
TCRBV3S1A0A5B6 ABCC5-203ENST00000382494 1923 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
TCRBV3S1A0A5B6 AP4B1-201ENST00000256658 2742 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
TCRBV3S1A0A5B6 PLCD1-204ENST00000463876 2963 ntAPPRIS ALT1 TSL 2 BASIC14.23□□□□□ -0.13
TCRBV3S1A0A5B6 RBL1-201ENST00000344359 3225 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
TCRBV3S1A0A5B6 EXTL1-201ENST00000374280 4015 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
TCRBV3S1A0A5B6 ADAT1-201ENST00000307921 1869 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
TCRBV3S1A0A5B6 GORASP1-201ENST00000319283 3722 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
TCRBV3S1A0A5B6 TSEN2-202ENST00000402228 2149 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
TCRBV3S1A0A5B6 SELENON-203ENST00000374315 4212 ntAPPRIS ALT2 TSL 5 BASIC14.23□□□□□ -0.13
TCRBV3S1A0A5B6 ZFP82-201ENST00000392161 2623 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
TCRBV3S1A0A5B6 ILK-201ENST00000299421 1802 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
TCRBV3S1A0A5B6 RMDN3-201ENST00000260385 3138 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
TCRBV3S1A0A5B6 NRAS-201ENST00000369535 4449 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
TCRBV3S1A0A5B6 KRBA2-202ENST00000396267 2562 ntTSL 2 BASIC14.23□□□□□ -0.13
TCRBV3S1A0A5B6 LINC01750-202ENST00000438293 3068 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
TCRBV3S1A0A5B6 SLK-201ENST00000335753 7673 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
TCRBV3S1A0A5B6 NDUFB9-201ENST00000276689 711 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
TCRBV3S1A0A5B6 FAM86B2-202ENST00000309608 806 ntTSL 3 BASIC14.23□□□□□ -0.13
TCRBV3S1A0A5B6 TMEM150B-201ENST00000326652 943 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
TCRBV3S1A0A5B6 ZUFSP-201ENST00000368573 1225 ntTSL 5 BASIC14.23□□□□□ -0.13
TCRBV3S1A0A5B6 AC004945.1-201ENST00000416738 983 ntBASIC14.23□□□□□ -0.13
TCRBV3S1A0A5B6 PARD6G-203ENST00000470488 596 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
TCRBV3S1A0A5B6 AL133375.1-201ENST00000500590 980 ntTSL 5 BASIC14.23□□□□□ -0.13
TCRBV3S1A0A5B6 AC093909.1-201ENST00000504731 1122 ntBASIC14.23□□□□□ -0.13
TCRBV3S1A0A5B6 AC008406.2-201ENST00000507058 532 ntTSL 3 BASIC14.23□□□□□ -0.13
TCRBV3S1A0A5B6 MRNIP-220ENST00000523084 1096 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
TCRBV3S1A0A5B6 AP000721.2-201ENST00000537170 650 ntTSL 4 BASIC14.23□□□□□ -0.13
TCRBV3S1A0A5B6 BEAN1-203ENST00000561796 1078 ntAPPRIS P2 TSL 1 (best) BASIC14.23□□□□□ -0.13
TCRBV3S1A0A5B6 AC034105.1-201ENST00000563488 319 ntBASIC14.23□□□□□ -0.13
TCRBV3S1A0A5B6 TNNT1-211ENST00000588426 683 ntTSL 5 BASIC14.23□□□□□ -0.13
TCRBV3S1A0A5B6 AC010503.1-201ENST00000596027 520 ntTSL 5 BASIC14.23□□□□□ -0.13
TCRBV3S1A0A5B6 PSMD5-203ENST00000373904 1538 ntTSL 2 BASIC14.23□□□□□ -0.13
TCRBV3S1A0A5B6 IFNA6-202ENST00000380210 1544 ntAPPRIS P1 BASIC14.23□□□□□ -0.13
TCRBV3S1A0A5B6 AC025171.1-202ENST00000499871 2271 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
TCRBV3S1A0A5B6 TARS2-203ENST00000369054 1998 ntTSL 2 BASIC14.23□□□□□ -0.13
TCRBV3S1A0A5B6 PLTP-203ENST00000372431 1743 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
TCRBV3S1A0A5B6 PRRT3-202ENST00000411976 1475 ntAPPRIS ALT2 TSL 1 (best) BASIC14.23□□□□□ -0.13
TCRBV3S1A0A5B6 CYP2AB1P-202ENST00000454440 1456 ntBASIC14.23□□□□□ -0.13
TCRBV3S1A0A5B6 TRAFD1-201ENST00000257604 3178 ntAPPRIS P2 TSL 2 BASIC14.23□□□□□ -0.13
TCRBV3S1A0A5B6 KIAA2026-202ENST00000399933 6988 ntAPPRIS P1 TSL 5 BASIC14.23□□□□□ -0.13
TCRBV3S1A0A5B6 ELAC2-201ENST00000338034 3148 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
TCRBV3S1A0A5B6 ZBTB7B-202ENST00000368426 3594 ntAPPRIS P3 TSL 1 (best) BASIC14.23□□□□□ -0.13
TCRBV3S1A0A5B6 GATB-201ENST00000263985 2385 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
TCRBV3S1A0A5B6 ANXA4-202ENST00000409920 1414 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
TCRBV3S1A0A5B6 PES1-204ENST00000402284 2144 ntTSL 5 BASIC14.23□□□□□ -0.13
TCRBV3S1A0A5B6 GLIS2-201ENST00000262366 4469 ntAPPRIS P1 TSL 2 BASIC14.23□□□□□ -0.13
TCRBV3S1A0A5B6 GGACT-201ENST00000376250 2804 ntAPPRIS P1 TSL 3 BASIC14.23□□□□□ -0.13
TCRBV3S1A0A5B6 GOLGA8R-201ENST00000327271 1896 ntAPPRIS P1 TSL 5 BASIC14.23□□□□□ -0.13
TCRBV3S1A0A5B6 Z97205.2-201ENST00000564697 1639 ntBASIC14.23□□□□□ -0.13
TCRBV3S1A0A5B6 PCDHA5-201ENST00000529619 4157 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
TCRBV3S1A0A5B6 HS2ST1-201ENST00000370550 6736 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
TCRBV3S1A0A5B6 RAPGEF3-218ENST00000548919 2776 ntTSL 2 BASIC14.22□□□□□ -0.13
TCRBV3S1A0A5B6 PGAP2-201ENST00000278243 2062 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
TCRBV3S1A0A5B6 ZFP64-203ENST00000361387 2545 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
TCRBV3S1A0A5B6 KRT8P12-202ENST00000472924 1397 ntBASIC14.22□□□□□ -0.13
TCRBV3S1A0A5B6 CROT-203ENST00000419147 2959 ntTSL 2 BASIC14.22□□□□□ -0.13
TCRBV3S1A0A5B6 BTD-207ENST00000449107 1820 ntAPPRIS P4 TSL 2 BASIC14.22□□□□□ -0.13
TCRBV3S1A0A5B6 KCNC1-202ENST00000379472 7965 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
TCRBV3S1A0A5B6 AC020915.4-201ENST00000597230 2708 ntTSL 2 BASIC14.22□□□□□ -0.13
TCRBV3S1A0A5B6 ARFGAP1-212ENST00000519604 3191 ntTSL 2 BASIC14.22□□□□□ -0.13
Retrieved 100 of 98,524 protein–RNA pairs in 32.6 ms