Protein–RNA interactions for Protein: Q9Y6M4

CSNK1G3, Casein kinase I isoform gamma-3, humanhuman

Predictions only

Length 447 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CSNK1G3Q9Y6M4 TRIM13-204ENST00000420995 2607 ntAPPRIS P3 TSL 1 (best) BASIC14.9□□□□□ -0.02
CSNK1G3Q9Y6M4 HSFX2-201ENST00000598963 1365 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
CSNK1G3Q9Y6M4 CANX-201ENST00000247461 4260 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
CSNK1G3Q9Y6M4 TPM2-202ENST00000360958 1189 ntAPPRIS P5 TSL 1 (best) BASIC14.9□□□□□ -0.02
CSNK1G3Q9Y6M4 DSCR3-204ENST00000399001 821 ntTSL 2 BASIC14.9□□□□□ -0.02
CSNK1G3Q9Y6M4 AC104457.1-201ENST00000401024 814 ntBASIC14.9□□□□□ -0.02
CSNK1G3Q9Y6M4 AL451065.1-201ENST00000428958 238 ntTSL 5 BASIC14.9□□□□□ -0.02
CSNK1G3Q9Y6M4 VGLL4-214ENST00000451674 938 ntTSL 1 (best) BASIC14.9□□□□□ -0.02
CSNK1G3Q9Y6M4 AC091804.1-201ENST00000486888 567 ntBASIC14.9□□□□□ -0.02
CSNK1G3Q9Y6M4 PAX5-211ENST00000522003 1019 ntTSL 1 (best) BASIC14.9□□□□□ -0.02
CSNK1G3Q9Y6M4 PRCD-204ENST00000586148 630 ntAPPRIS P1 TSL 5 BASIC14.9□□□□□ -0.02
CSNK1G3Q9Y6M4 PRCD-210ENST00000592014 462 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
CSNK1G3Q9Y6M4 SCN1B-204ENST00000596348 1176 ntTSL 5 BASIC14.9□□□□□ -0.02
CSNK1G3Q9Y6M4 AC244157.2-201ENST00000616239 1006 ntBASIC14.9□□□□□ -0.02
CSNK1G3Q9Y6M4 PDLIM5-202ENST00000318007 1960 ntTSL 1 (best) BASIC14.9□□□□□ -0.02
CSNK1G3Q9Y6M4 PPP1R16B-202ENST00000373331 6106 ntTSL 5 BASIC14.9□□□□□ -0.02
CSNK1G3Q9Y6M4 ZNF114-204ENST00000595607 2478 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
CSNK1G3Q9Y6M4 CDH7-203ENST00000536984 3766 ntTSL 1 (best) BASIC14.9□□□□□ -0.02
CSNK1G3Q9Y6M4 SHISA9-203ENST00000558583 6724 ntAPPRIS P4 TSL 5 BASIC14.9□□□□□ -0.02
CSNK1G3Q9Y6M4 BPGM-201ENST00000344924 1753 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
CSNK1G3Q9Y6M4 HHIP-202ENST00000434550 1770 ntTSL 1 (best) BASIC14.9□□□□□ -0.02
CSNK1G3Q9Y6M4 DDX1-201ENST00000233084 2739 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
CSNK1G3Q9Y6M4 AC005064.1-201ENST00000422488 2725 ntTSL 1 (best) BASIC14.9□□□□□ -0.02
CSNK1G3Q9Y6M4 AP003680.1-201ENST00000598970 3660 ntBASIC14.9□□□□□ -0.02
CSNK1G3Q9Y6M4 EPB41L3-202ENST00000342933 4270 ntAPPRIS ALT2 TSL 5 BASIC14.9□□□□□ -0.02
CSNK1G3Q9Y6M4 HARS-202ENST00000415192 1401 ntTSL 2 BASIC14.9□□□□□ -0.02
CSNK1G3Q9Y6M4 FSD2-202ENST00000541889 2356 ntTSL 1 (best) BASIC14.9□□□□□ -0.02
CSNK1G3Q9Y6M4 MYEF2-201ENST00000267836 2958 ntAPPRIS ALT2 TSL 1 (best) BASIC14.9□□□□□ -0.02
CSNK1G3Q9Y6M4 ARHGAP11B-210ENST00000622744 2042 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
CSNK1G3Q9Y6M4 NELFA-203ENST00000411638 2199 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
CSNK1G3Q9Y6M4 MGAT4B-202ENST00000337755 3027 ntTSL 2 BASIC14.9□□□□□ -0.02
CSNK1G3Q9Y6M4 ARID4B-202ENST00000349213 5811 ntTSL 1 (best) BASIC14.9□□□□□ -0.02
CSNK1G3Q9Y6M4 PLXNC1-201ENST00000258526 7346 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
CSNK1G3Q9Y6M4 ATP6AP2-217ENST00000636580 2337 ntAPPRIS P2 TSL 1 (best) BASIC14.89□□□□□ -0.03
CSNK1G3Q9Y6M4 PROZ-202ENST00000375547 1488 ntAPPRIS P3 TSL 1 (best) BASIC14.89□□□□□ -0.03
CSNK1G3Q9Y6M4 C11orf71-202ENST00000623205 1980 ntAPPRIS ALT2 BASIC14.89□□□□□ -0.03
CSNK1G3Q9Y6M4 ATP2A2-204ENST00000539276 4094 ntAPPRIS P4 TSL 1 (best) BASIC14.89□□□□□ -0.03
CSNK1G3Q9Y6M4 RGR-202ENST00000359452 2247 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
CSNK1G3Q9Y6M4 RBM12-201ENST00000359646 5332 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
CSNK1G3Q9Y6M4 STAT1-202ENST00000392322 2716 ntAPPRIS ALT1 TSL 1 (best) BASIC14.89□□□□□ -0.03
CSNK1G3Q9Y6M4 ADARB2-203ENST00000381312 8421 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
CSNK1G3Q9Y6M4 SSH3-203ENST00000376757 2990 ntTSL 2 BASIC14.89□□□□□ -0.03
CSNK1G3Q9Y6M4 SEC14L4-204ENST00000381982 1603 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
CSNK1G3Q9Y6M4 ABHD16A-201ENST00000395952 2103 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
CSNK1G3Q9Y6M4 PAM-206ENST00000438793 5432 ntAPPRIS ALT1 TSL 1 (best) BASIC14.89□□□□□ -0.03
CSNK1G3Q9Y6M4 PLAA-205ENST00000520884 2041 ntTSL 2 BASIC14.89□□□□□ -0.03
CSNK1G3Q9Y6M4 LINC00884-202ENST00000448892 2680 ntTSL 5 BASIC14.89□□□□□ -0.03
CSNK1G3Q9Y6M4 CSAG1-202ENST00000370287 875 ntAPPRIS P2 TSL 1 (best) BASIC14.89□□□□□ -0.03
CSNK1G3Q9Y6M4 ITPA-201ENST00000380113 1185 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
CSNK1G3Q9Y6M4 ITPA-202ENST00000399838 897 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
CSNK1G3Q9Y6M4 MIR663B-201ENST00000408361 115 ntBASIC14.89□□□□□ -0.03
CSNK1G3Q9Y6M4 EIF3FP3-201ENST00000434851 1086 ntBASIC14.89□□□□□ -0.03
CSNK1G3Q9Y6M4 POM121L10P-201ENST00000436994 1285 ntBASIC14.89□□□□□ -0.03
CSNK1G3Q9Y6M4 APOPT1-207ENST00000477116 906 ntTSL 3 BASIC14.89□□□□□ -0.03
CSNK1G3Q9Y6M4 AP001007.1-201ENST00000526796 645 ntTSL 2 BASIC14.89□□□□□ -0.03
CSNK1G3Q9Y6M4 C14orf178-204ENST00000557011 474 ntAPPRIS ALT2 TSL 1 (best) BASIC14.89□□□□□ -0.03
CSNK1G3Q9Y6M4 AC007342.4-201ENST00000566383 584 ntTSL 4 BASIC14.89□□□□□ -0.03
CSNK1G3Q9Y6M4 LINC00479-204ENST00000589300 718 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
CSNK1G3Q9Y6M4 TPD52L2-205ENST00000352482 2339 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
CSNK1G3Q9Y6M4 AC009053.1-201ENST00000566802 2320 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
CSNK1G3Q9Y6M4 TPD52L2-210ENST00000615907 2310 ntTSL 4 BASIC14.89□□□□□ -0.03
CSNK1G3Q9Y6M4 PPP1R21-201ENST00000281394 3137 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
CSNK1G3Q9Y6M4 PRSS54-201ENST00000219301 1810 ntAPPRIS P1 TSL 5 BASIC14.89□□□□□ -0.03
CSNK1G3Q9Y6M4 ZNF276-201ENST00000289816 4589 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
CSNK1G3Q9Y6M4 CARD10-201ENST00000251973 3934 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
CSNK1G3Q9Y6M4 AC126177.1-201ENST00000547829 2218 ntBASIC14.89□□□□□ -0.03
CSNK1G3Q9Y6M4 DPEP1-201ENST00000261615 1592 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
CSNK1G3Q9Y6M4 PRX-201ENST00000291825 5502 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
CSNK1G3Q9Y6M4 HTR4-209ENST00000521530 1323 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
CSNK1G3Q9Y6M4 RBCK1-201ENST00000353660 2511 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
CSNK1G3Q9Y6M4 TLE3-215ENST00000559048 2918 ntTSL 2 BASIC14.89□□□□□ -0.03
CSNK1G3Q9Y6M4 PAX3-206ENST00000392070 2258 ntAPPRIS P4 TSL 1 (best) BASIC14.89□□□□□ -0.03
CSNK1G3Q9Y6M4 TBC1D22A-205ENST00000406733 2267 ntTSL 2 BASIC14.89□□□□□ -0.03
CSNK1G3Q9Y6M4 SLC2A9-202ENST00000309065 1866 ntAPPRIS ALT2 TSL 1 (best) BASIC14.89□□□□□ -0.03
CSNK1G3Q9Y6M4 AC138028.6-201ENST00000616106 1482 ntBASIC14.89□□□□□ -0.03
CSNK1G3Q9Y6M4 RASA1-201ENST00000274376 3752 ntAPPRIS P3 TSL 1 (best) BASIC14.88□□□□□ -0.03
CSNK1G3Q9Y6M4 CACNA1A-202ENST00000573710 7569 ntAPPRIS ALT2 TSL 5 BASIC14.88□□□□□ -0.03
CSNK1G3Q9Y6M4 PRDM1-203ENST00000369096 5164 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
CSNK1G3Q9Y6M4 DPP6-203ENST00000404039 4798 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
CSNK1G3Q9Y6M4 ZKSCAN7-202ENST00000341840 1757 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
CSNK1G3Q9Y6M4 TSSC2-204ENST00000529482 2337 ntTSL 2 BASIC14.88□□□□□ -0.03
CSNK1G3Q9Y6M4 C6orf223-201ENST00000336600 3581 ntAPPRIS P2 TSL 1 (best) BASIC14.88□□□□□ -0.03
CSNK1G3Q9Y6M4 MPP1-204ENST00000393531 1389 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
CSNK1G3Q9Y6M4 LINC00668-206ENST00000581725 1902 ntTSL 2 BASIC14.88□□□□□ -0.03
CSNK1G3Q9Y6M4 OTUD7A-201ENST00000307050 10770 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
CSNK1G3Q9Y6M4 ACSL3-201ENST00000357430 5679 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
CSNK1G3Q9Y6M4 SPATA33-210ENST00000611218 1546 ntAPPRIS ALT2 TSL 2 BASIC14.88□□□□□ -0.03
CSNK1G3Q9Y6M4 NPAS2-201ENST00000335681 4007 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
CSNK1G3Q9Y6M4 FRMPD4-201ENST00000380682 8465 ntAPPRIS P2 TSL 1 (best) BASIC14.88□□□□□ -0.03
CSNK1G3Q9Y6M4 OSBPL6-203ENST00000357080 2217 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
CSNK1G3Q9Y6M4 GOSR2-211ENST00000623037 1814 ntTSL 5 BASIC14.88□□□□□ -0.03
CSNK1G3Q9Y6M4 OCEL1-201ENST00000215061 1133 ntAPPRIS P2 TSL 1 (best) BASIC14.88□□□□□ -0.03
CSNK1G3Q9Y6M4 AL022323.1-201ENST00000366110 957 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
CSNK1G3Q9Y6M4 KRTAP10-13P-201ENST00000412914 571 ntBASIC14.88□□□□□ -0.03
CSNK1G3Q9Y6M4 POM121L8P-201ENST00000417732 1281 ntBASIC14.88□□□□□ -0.03
CSNK1G3Q9Y6M4 PRKG1-AS1-201ENST00000420193 971 ntTSL 3 BASIC14.88□□□□□ -0.03
CSNK1G3Q9Y6M4 LINC01762-204ENST00000434879 436 ntTSL 2 BASIC14.88□□□□□ -0.03
CSNK1G3Q9Y6M4 PTPA-218ENST00000435132 618 ntTSL 2 BASIC14.88□□□□□ -0.03
CSNK1G3Q9Y6M4 FGF13-204ENST00000436198 1165 ntTSL 2 BASIC14.88□□□□□ -0.03
CSNK1G3Q9Y6M4 AL035588.1-201ENST00000438967 408 ntTSL 3 BASIC14.88□□□□□ -0.03
Retrieved 100 of 98,524 protein–RNA pairs in 33.1 ms