Protein–RNA interactions for Protein: Q9Y5R8

TRAPPC1, Trafficking protein particle complex subunit 1, humanhuman

Predictions only

Length 145 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC1Q9Y5R8 TBCE-207ENST00000543662 2117 ntAPPRIS ALT2 TSL 2 BASIC11.56□□□□□ -0.56
TRAPPC1Q9Y5R8 UNC13B-202ENST00000378496 5063 ntTSL 1 (best) BASIC11.56□□□□□ -0.56
TRAPPC1Q9Y5R8 MKNK1-204ENST00000371946 2719 ntTSL 1 (best) BASIC11.56□□□□□ -0.56
TRAPPC1Q9Y5R8 TNNI1-207ENST00000622580 6142 ntAPPRIS ALT1 TSL 1 (best) BASIC11.56□□□□□ -0.56
TRAPPC1Q9Y5R8 NUP98-204ENST00000397004 3923 ntTSL 1 (best) BASIC11.56□□□□□ -0.56
TRAPPC1Q9Y5R8 GMEB2-203ENST00000370077 4223 ntAPPRIS P1 TSL 1 (best) BASIC11.56□□□□□ -0.56
TRAPPC1Q9Y5R8 ARAP1-204ENST00000393609 5145 ntAPPRIS ALT2 TSL 2 BASIC11.56□□□□□ -0.56
TRAPPC1Q9Y5R8 HSCB-201ENST00000216027 1114 ntAPPRIS P1 TSL 1 (best) BASIC11.56□□□□□ -0.56
TRAPPC1Q9Y5R8 MBD4-201ENST00000249910 2470 ntAPPRIS P3 TSL 1 (best) BASIC11.56□□□□□ -0.56
TRAPPC1Q9Y5R8 PRR30-201ENST00000335524 2008 ntAPPRIS P2 TSL 1 (best) BASIC11.56□□□□□ -0.56
TRAPPC1Q9Y5R8 ANO10-202ENST00000350459 2039 ntTSL 1 (best) BASIC11.56□□□□□ -0.56
TRAPPC1Q9Y5R8 ANKRD20A18P-201ENST00000359341 492 ntBASIC11.56□□□□□ -0.56
TRAPPC1Q9Y5R8 FOXM1-203ENST00000361953 3370 ntAPPRIS ALT1 TSL 1 (best) BASIC11.56□□□□□ -0.56
TRAPPC1Q9Y5R8 BEND5-201ENST00000371833 1716 ntAPPRIS P1 TSL 1 (best) BASIC11.56□□□□□ -0.56
TRAPPC1Q9Y5R8 BEX1-201ENST00000372728 864 ntAPPRIS P1 TSL 1 (best) BASIC11.56□□□□□ -0.56
TRAPPC1Q9Y5R8 TSPO2-202ENST00000373161 958 ntAPPRIS P1 TSL 1 (best) BASIC11.56□□□□□ -0.56
TRAPPC1Q9Y5R8 CD70-202ENST00000423145 881 ntTSL 2 BASIC11.56□□□□□ -0.56
TRAPPC1Q9Y5R8 CPSF7-205ENST00000439958 3524 ntAPPRIS ALT1 TSL 1 (best) BASIC11.56□□□□□ -0.56
TRAPPC1Q9Y5R8 FGF12-207ENST00000454309 3058 ntAPPRIS P1 TSL 1 (best) BASIC11.56□□□□□ -0.56
TRAPPC1Q9Y5R8 AC080013.1-202ENST00000465477 674 ntTSL 5 BASIC11.56□□□□□ -0.56
TRAPPC1Q9Y5R8 VENTXP7-201ENST00000475503 772 ntBASIC11.56□□□□□ -0.56
TRAPPC1Q9Y5R8 BOC-211ENST00000484034 1286 ntTSL 1 (best) BASIC11.56□□□□□ -0.56
TRAPPC1Q9Y5R8 SLC25A6P2-201ENST00000497974 877 ntBASIC11.56□□□□□ -0.56
TRAPPC1Q9Y5R8 TRH-202ENST00000507066 1580 ntAPPRIS ALT1 TSL 5 BASIC11.56□□□□□ -0.56
TRAPPC1Q9Y5R8 AZIN1-AS1-214ENST00000522850 473 ntTSL 3 BASIC11.56□□□□□ -0.56
TRAPPC1Q9Y5R8 AP003396.3-201ENST00000530918 778 ntTSL 5 BASIC11.56□□□□□ -0.56
TRAPPC1Q9Y5R8 AP002469.2-201ENST00000531724 424 ntBASIC11.56□□□□□ -0.56
TRAPPC1Q9Y5R8 ATE1-208ENST00000540606 5165 ntTSL 2 BASIC11.56□□□□□ -0.56
TRAPPC1Q9Y5R8 LINC02396-202ENST00000550636 2324 ntTSL 2 BASIC11.56□□□□□ -0.56
TRAPPC1Q9Y5R8 AC243562.2-201ENST00000561247 970 ntBASIC11.56□□□□□ -0.56
TRAPPC1Q9Y5R8 AL441883.1-201ENST00000566170 1045 ntBASIC11.56□□□□□ -0.56
TRAPPC1Q9Y5R8 ACTG1-206ENST00000573283 2002 ntAPPRIS P1 TSL 5 BASIC11.56□□□□□ -0.56
TRAPPC1Q9Y5R8 TMEM220-AS1-202ENST00000580899 561 ntTSL 4 BASIC11.56□□□□□ -0.56
TRAPPC1Q9Y5R8 C19orf44-203ENST00000594035 2609 ntAPPRIS ALT2 TSL 1 (best) BASIC11.56□□□□□ -0.56
TRAPPC1Q9Y5R8 AC114488.2-214ENST00000609033 813 ntTSL 5 BASIC11.56□□□□□ -0.56
TRAPPC1Q9Y5R8 PI4KAP1-204ENST00000612579 1703 ntBASIC11.56□□□□□ -0.56
TRAPPC1Q9Y5R8 AC073592.4-201ENST00000623827 446 ntBASIC11.56□□□□□ -0.56
TRAPPC1Q9Y5R8 WDR6-223ENST00000627177 207 ntTSL 2 BASIC11.56□□□□□ -0.56
TRAPPC1Q9Y5R8 CREBZF-204ENST00000527447 4037 ntAPPRIS P1 BASIC11.56□□□□□ -0.56
TRAPPC1Q9Y5R8 LRRFIP2-202ENST00000354379 2821 ntAPPRIS P1 TSL 1 (best) BASIC11.56□□□□□ -0.56
TRAPPC1Q9Y5R8 STRA6-202ENST00000395105 2800 ntAPPRIS P1 TSL 1 (best) BASIC11.56□□□□□ -0.56
TRAPPC1Q9Y5R8 DHX34-201ENST00000328771 4372 ntAPPRIS P1 TSL 5 BASIC11.56□□□□□ -0.56
TRAPPC1Q9Y5R8 ADCY7-203ENST00000537579 2090 ntTSL 5 BASIC11.56□□□□□ -0.56
TRAPPC1Q9Y5R8 SERAC1-201ENST00000367101 1907 ntTSL 5 BASIC11.56□□□□□ -0.56
TRAPPC1Q9Y5R8 STXBP1-201ENST00000373299 3765 ntAPPRIS P1 TSL 1 (best) BASIC11.56□□□□□ -0.56
TRAPPC1Q9Y5R8 KRT27-201ENST00000301656 1612 ntAPPRIS P1 TSL 1 (best) BASIC11.56□□□□□ -0.56
TRAPPC1Q9Y5R8 TP73-213ENST00000604479 1623 ntTSL 5 BASIC11.56□□□□□ -0.56
TRAPPC1Q9Y5R8 USP49-201ENST00000373006 3177 ntTSL 1 (best) BASIC11.56□□□□□ -0.56
TRAPPC1Q9Y5R8 TMEM121B-202ENST00000399875 3961 ntAPPRIS ALT2 TSL 2 BASIC11.56□□□□□ -0.56
TRAPPC1Q9Y5R8 C8orf46-215ENST00000522977 1347 ntTSL 2 BASIC11.56□□□□□ -0.56
TRAPPC1Q9Y5R8 SEMA3F-201ENST00000002829 3802 ntAPPRIS P3 TSL 1 (best) BASIC11.56□□□□□ -0.56
TRAPPC1Q9Y5R8 ABCA2-202ENST00000341511 8063 ntAPPRIS P2 TSL 5 BASIC11.56□□□□□ -0.56
TRAPPC1Q9Y5R8 UPB1-201ENST00000326010 2290 ntAPPRIS P1 TSL 1 (best) BASIC11.56□□□□□ -0.56
TRAPPC1Q9Y5R8 HEY1-202ENST00000354724 2293 ntAPPRIS P3 TSL 1 (best) BASIC11.56□□□□□ -0.56
TRAPPC1Q9Y5R8 CALCB-202ENST00000523376 2258 ntTSL 2 BASIC11.56□□□□□ -0.56
TRAPPC1Q9Y5R8 RIMS1-218ENST00000522291 3876 ntTSL 5 BASIC11.56□□□□□ -0.56
TRAPPC1Q9Y5R8 LIPA-202ENST00000336233 2782 ntAPPRIS P1 TSL 1 (best) BASIC11.56□□□□□ -0.56
TRAPPC1Q9Y5R8 CAMK2D-207ENST00000505990 1802 ntTSL 5 BASIC11.56□□□□□ -0.56
TRAPPC1Q9Y5R8 MST1-202ENST00000449682 2621 ntAPPRIS P1 TSL 1 (best) BASIC11.56□□□□□ -0.56
TRAPPC1Q9Y5R8 DEK-202ENST00000397239 3427 ntAPPRIS P1 TSL 1 (best) BASIC11.56□□□□□ -0.56
TRAPPC1Q9Y5R8 EIF3A-201ENST00000369144 6646 ntAPPRIS P1 TSL 1 (best) BASIC11.55□□□□□ -0.56
TRAPPC1Q9Y5R8 CYTH1-215ENST00000591455 3286 ntAPPRIS P3 TSL 2 BASIC11.55□□□□□ -0.56
TRAPPC1Q9Y5R8 TEKT4-201ENST00000295201 1505 ntAPPRIS P1 TSL 1 (best) BASIC11.55□□□□□ -0.56
TRAPPC1Q9Y5R8 CROT-203ENST00000419147 2959 ntTSL 2 BASIC11.55□□□□□ -0.56
TRAPPC1Q9Y5R8 EGR2-202ENST00000411732 2824 ntTSL 2 BASIC11.55□□□□□ -0.56
TRAPPC1Q9Y5R8 ADD2-202ENST00000355733 2654 ntAPPRIS ALT2 TSL 1 (best) BASIC11.55□□□□□ -0.56
TRAPPC1Q9Y5R8 DDX43-201ENST00000370336 2513 ntAPPRIS P1 TSL 1 (best) BASIC11.55□□□□□ -0.56
TRAPPC1Q9Y5R8 CYP4F11-204ENST00000591841 2531 ntTSL 2 BASIC11.55□□□□□ -0.56
TRAPPC1Q9Y5R8 DLGAP1-213ENST00000534970 2365 ntTSL 2 BASIC11.55□□□□□ -0.56
TRAPPC1Q9Y5R8 KRT74-203ENST00000549343 2858 ntTSL 5 BASIC11.55□□□□□ -0.56
TRAPPC1Q9Y5R8 CETP-203ENST00000566128 1733 ntTSL 5 BASIC11.55□□□□□ -0.56
TRAPPC1Q9Y5R8 CEP70-201ENST00000264982 2732 ntAPPRIS P3 TSL 1 (best) BASIC11.55□□□□□ -0.56
TRAPPC1Q9Y5R8 SEMA7A-202ENST00000542748 3228 ntTSL 5 BASIC11.55□□□□□ -0.56
TRAPPC1Q9Y5R8 TLR6-202ENST00000436693 5880 ntAPPRIS P1 TSL 1 (best) BASIC11.55□□□□□ -0.56
TRAPPC1Q9Y5R8 SH2D5-201ENST00000375031 3705 ntTSL 2 BASIC11.55□□□□□ -0.56
TRAPPC1Q9Y5R8 TTC8-203ENST00000346301 2058 ntTSL 1 (best) BASIC11.55□□□□□ -0.56
TRAPPC1Q9Y5R8 LINC00116-201ENST00000414416 2051 ntAPPRIS P5 TSL 1 (best) BASIC11.55□□□□□ -0.56
TRAPPC1Q9Y5R8 MAGED4B-201ENST00000335504 2578 ntAPPRIS P3 TSL 1 (best) BASIC11.55□□□□□ -0.56
TRAPPC1Q9Y5R8 ANP32A-203ENST00000465139 2440 ntAPPRIS P2 TSL 1 (best) BASIC11.55□□□□□ -0.56
TRAPPC1Q9Y5R8 GAP43-202ENST00000393780 1901 ntTSL 1 (best) BASIC11.55□□□□□ -0.56
TRAPPC1Q9Y5R8 ECHDC1-220ENST00000528402 1449 ntTSL 1 (best) BASIC11.55□□□□□ -0.56
TRAPPC1Q9Y5R8 TTC14-202ENST00000382584 2274 ntTSL 1 (best) BASIC11.55□□□□□ -0.56
TRAPPC1Q9Y5R8 RAMP2-201ENST00000253796 780 ntAPPRIS P2 TSL 1 (best) BASIC11.55□□□□□ -0.56
TRAPPC1Q9Y5R8 PIEZO1-202ENST00000327397 1246 ntTSL 2 BASIC11.55□□□□□ -0.56
TRAPPC1Q9Y5R8 SOD2-201ENST00000337404 991 ntTSL 2 BASIC11.55□□□□□ -0.56
TRAPPC1Q9Y5R8 FUOM-202ENST00000368551 628 ntTSL 3 BASIC11.55□□□□□ -0.56
TRAPPC1Q9Y5R8 DHRS12-203ENST00000444610 1162 ntAPPRIS P1 TSL 1 (best) BASIC11.55□□□□□ -0.56
TRAPPC1Q9Y5R8 NDUFA6-202ENST00000498737 1256 ntTSL 1 (best) BASIC11.55□□□□□ -0.56
TRAPPC1Q9Y5R8 LINC01385-201ENST00000512310 780 ntTSL 4 BASIC11.55□□□□□ -0.56
TRAPPC1Q9Y5R8 VENTXP5-201ENST00000523979 775 ntBASIC11.55□□□□□ -0.56
TRAPPC1Q9Y5R8 AC107918.2-201ENST00000530817 355 ntBASIC11.55□□□□□ -0.56
TRAPPC1Q9Y5R8 IRX5-204ENST00000560154 879 ntTSL 5 BASIC11.55□□□□□ -0.56
TRAPPC1Q9Y5R8 AC090616.6-201ENST00000582640 721 ntBASIC11.55□□□□□ -0.56
TRAPPC1Q9Y5R8 NDUFA6-203ENST00000602404 1080 ntAPPRIS P1 TSL 1 (best) BASIC11.55□□□□□ -0.56
TRAPPC1Q9Y5R8 AC064862.7-201ENST00000604520 867 ntBASIC11.55□□□□□ -0.56
TRAPPC1Q9Y5R8 FGF14-AS2-201ENST00000606448 1074 ntBASIC11.55□□□□□ -0.56
TRAPPC1Q9Y5R8 DNASE1L2-206ENST00000613572 1260 ntAPPRIS P1 TSL 5 BASIC11.55□□□□□ -0.56
TRAPPC1Q9Y5R8 SPINK2-206ENST00000618802 608 ntTSL 3 BASIC11.55□□□□□ -0.56
TRAPPC1Q9Y5R8 IRX5-205ENST00000620085 881 ntTSL 1 (best) BASIC11.55□□□□□ -0.56
TRAPPC1Q9Y5R8 AC010947.1-201ENST00000623454 693 ntBASIC11.55□□□□□ -0.56
Retrieved 100 of 98,524 protein–RNA pairs in 50.9 ms