Protein–RNA interactions for Protein: Q9Y5B0

CTDP1, RNA polymerase II subunit A C-terminal domain phosphatase, humanhuman

Predicted RBP Predictions only

Length 961 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CTDP1Q9Y5B0 NOL4L-202ENST00000326071 701 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
CTDP1Q9Y5B0 HIST1H2AJ-201ENST00000333151 387 ntAPPRIS P1 BASIC17.57■□□□□ 0.4
CTDP1Q9Y5B0 CIDEC-201ENST00000336832 1277 ntAPPRIS P3 TSL 1 (best) BASIC17.57■□□□□ 0.4
CTDP1Q9Y5B0 NME2-201ENST00000393183 568 ntTSL 2 BASIC17.57■□□□□ 0.4
CTDP1Q9Y5B0 SMIM11A-203ENST00000399299 1033 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
CTDP1Q9Y5B0 NDUFAB1P1-201ENST00000404262 460 ntBASIC17.57■□□□□ 0.4
CTDP1Q9Y5B0 MIR1247-201ENST00000408206 136 ntBASIC17.57■□□□□ 0.4
CTDP1Q9Y5B0 AC007319.1-202ENST00000412276 829 ntTSL 5 BASIC17.57■□□□□ 0.4
CTDP1Q9Y5B0 CIDEC-203ENST00000423850 1036 ntTSL 2 BASIC17.57■□□□□ 0.4
CTDP1Q9Y5B0 CNN2P10-201ENST00000443067 918 ntBASIC17.57■□□□□ 0.4
CTDP1Q9Y5B0 CIDEC-206ENST00000455015 1123 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
CTDP1Q9Y5B0 CCDC153-204ENST00000503566 1295 ntAPPRIS P1 TSL 5 BASIC17.57■□□□□ 0.4
CTDP1Q9Y5B0 AL021546.1-201ENST00000551806 552 ntAPPRIS P1 TSL 3 BASIC17.57■□□□□ 0.4
CTDP1Q9Y5B0 AC046168.2-201ENST00000560590 875 ntTSL 3 BASIC17.57■□□□□ 0.4
CTDP1Q9Y5B0 AP005329.1-201ENST00000578800 1035 ntTSL 2 BASIC17.57■□□□□ 0.4
CTDP1Q9Y5B0 AC104982.3-201ENST00000581995 514 ntBASIC17.57■□□□□ 0.4
CTDP1Q9Y5B0 MIR3615-201ENST00000581999 87 ntBASIC17.57■□□□□ 0.4
CTDP1Q9Y5B0 KLK3-211ENST00000597483 810 ntTSL 2 BASIC17.57■□□□□ 0.4
CTDP1Q9Y5B0 CCL5-202ENST00000605140 1244 ntAPPRIS P1 TSL 5 BASIC17.57■□□□□ 0.4
CTDP1Q9Y5B0 KRT32-201ENST00000225899 1750 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
CTDP1Q9Y5B0 TBRG4-201ENST00000258770 2243 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
CTDP1Q9Y5B0 LETM2-205ENST00000519476 2240 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
CTDP1Q9Y5B0 OPA1-202ENST00000361510 6492 ntAPPRIS ALT2 TSL 5 BASIC17.57■□□□□ 0.4
CTDP1Q9Y5B0 RGS6-218ENST00000556437 1689 ntAPPRIS ALT1 TSL 1 (best) BASIC17.57■□□□□ 0.4
CTDP1Q9Y5B0 MIOS-202ENST00000405785 3095 ntAPPRIS P1 TSL 5 BASIC17.57■□□□□ 0.4
CTDP1Q9Y5B0 C10orf10-201ENST00000298295 2120 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
CTDP1Q9Y5B0 ASPH-202ENST00000379449 1603 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
CTDP1Q9Y5B0 HLA-DQB1-205ENST00000434651 1642 ntAPPRIS P1 BASIC17.57■□□□□ 0.4
CTDP1Q9Y5B0 NBEA-201ENST00000310336 10794 ntAPPRIS ALT1 TSL 1 (best) BASIC17.57■□□□□ 0.4
CTDP1Q9Y5B0 TMEM198B-201ENST00000471276 1958 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
CTDP1Q9Y5B0 SNRPN-202ENST00000390687 1528 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
CTDP1Q9Y5B0 EIF4G1-212ENST00000424196 5653 ntTSL 2 BASIC17.56■□□□□ 0.4
CTDP1Q9Y5B0 MYH6-202ENST00000405093 5941 ntAPPRIS P1 TSL 5 BASIC17.56■□□□□ 0.4
CTDP1Q9Y5B0 UBE2J1-201ENST00000435041 4290 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
CTDP1Q9Y5B0 ESRRB-207ENST00000556177 1427 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
CTDP1Q9Y5B0 RGR-202ENST00000359452 2247 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
CTDP1Q9Y5B0 BMI1-201ENST00000376663 3428 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
CTDP1Q9Y5B0 MCM7-203ENST00000354230 2975 ntTSL 2 BASIC17.56■□□□□ 0.4
CTDP1Q9Y5B0 ZKSCAN7-202ENST00000341840 1757 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
CTDP1Q9Y5B0 SUMO3-203ENST00000397898 1779 ntTSL 3 BASIC17.56■□□□□ 0.4
CTDP1Q9Y5B0 POR-218ENST00000461988 2522 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
CTDP1Q9Y5B0 BATF-201ENST00000286639 980 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
CTDP1Q9Y5B0 SBSPON-201ENST00000297354 3801 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
CTDP1Q9Y5B0 CRABP1-201ENST00000299529 772 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
CTDP1Q9Y5B0 DBNDD2-201ENST00000357275 1036 ntAPPRIS P1 TSL 5 BASIC17.56■□□□□ 0.4
CTDP1Q9Y5B0 RHOC-206ENST00000369637 888 ntAPPRIS P1 TSL 3 BASIC17.56■□□□□ 0.4
CTDP1Q9Y5B0 PRTFDC1-203ENST00000376378 747 ntTSL 2 BASIC17.56■□□□□ 0.4
CTDP1Q9Y5B0 GPAA1P2-201ENST00000417923 928 ntBASIC17.56■□□□□ 0.4
CTDP1Q9Y5B0 EIF3FP3-201ENST00000434851 1086 ntBASIC17.56■□□□□ 0.4
CTDP1Q9Y5B0 FGF13-204ENST00000436198 1165 ntTSL 2 BASIC17.56■□□□□ 0.4
CTDP1Q9Y5B0 AC006487.1-201ENST00000514506 1221 ntTSL 2 BASIC17.56■□□□□ 0.4
CTDP1Q9Y5B0 AC084859.1-201ENST00000533002 670 ntTSL 4 BASIC17.56■□□□□ 0.4
CTDP1Q9Y5B0 CYGB-203ENST00000589145 788 ntTSL 3 BASIC17.56■□□□□ 0.4
CTDP1Q9Y5B0 OR10B1P-201ENST00000601666 907 ntBASIC17.56■□□□□ 0.4
CTDP1Q9Y5B0 AC244517.4-201ENST00000624549 580 ntTSL 4 BASIC17.56■□□□□ 0.4
CTDP1Q9Y5B0 CCDC68-204ENST00000591504 4132 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
CTDP1Q9Y5B0 USP43-201ENST00000285199 4169 ntAPPRIS P3 TSL 1 (best) BASIC17.56■□□□□ 0.4
CTDP1Q9Y5B0 AC133785.1-201ENST00000429282 2824 ntTSL 2 BASIC17.56■□□□□ 0.4
CTDP1Q9Y5B0 LENG8-209ENST00000616932 2825 ntAPPRIS ALT2 TSL 5 BASIC17.56■□□□□ 0.4
CTDP1Q9Y5B0 PRSS54-201ENST00000219301 1810 ntAPPRIS P1 TSL 5 BASIC17.56■□□□□ 0.4
CTDP1Q9Y5B0 NFE2-203ENST00000540264 1833 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
CTDP1Q9Y5B0 DZIP1L-204ENST00000469243 2107 ntAPPRIS ALT2 TSL 2 BASIC17.56■□□□□ 0.4
CTDP1Q9Y5B0 C1QTNF2-201ENST00000393975 2414 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
CTDP1Q9Y5B0 USP37-202ENST00000338465 1771 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
CTDP1Q9Y5B0 HHIP-202ENST00000434550 1770 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
CTDP1Q9Y5B0 DNAJC16-201ENST00000375838 2357 ntTSL 5 BASIC17.55■□□□□ 0.4
CTDP1Q9Y5B0 DNAAF1-201ENST00000378553 2379 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
CTDP1Q9Y5B0 ADRB3-201ENST00000345060 2950 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
CTDP1Q9Y5B0 C19orf68-203ENST00000614654 3588 ntAPPRIS P2 TSL 5 BASIC17.55■□□□□ 0.4
CTDP1Q9Y5B0 NIPA2-201ENST00000337451 3233 ntAPPRIS P1 TSL 5 BASIC17.55■□□□□ 0.4
CTDP1Q9Y5B0 UBE3A-207ENST00000614096 8741 ntAPPRIS ALT1 TSL 1 (best) BASIC17.55■□□□□ 0.4
CTDP1Q9Y5B0 AC006063.2-201ENST00000640161 1696 ntTSL 5 BASIC17.55■□□□□ 0.4
CTDP1Q9Y5B0 GPSM2-202ENST00000406462 7433 ntAPPRIS P1 TSL 5 BASIC17.55■□□□□ 0.4
CTDP1Q9Y5B0 GAL3ST4-201ENST00000360039 2537 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
CTDP1Q9Y5B0 FXYD3-202ENST00000346446 1320 ntTSL 2 BASIC17.55■□□□□ 0.4
CTDP1Q9Y5B0 GRN-222ENST00000639447 1314 ntTSL 2 BASIC17.55■□□□□ 0.4
CTDP1Q9Y5B0 SLC2A13-202ENST00000380858 3082 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
CTDP1Q9Y5B0 TRIM71-201ENST00000383763 8685 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
CTDP1Q9Y5B0 C1orf123-201ENST00000294360 1085 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
CTDP1Q9Y5B0 EIF4EBP3-201ENST00000310331 691 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
CTDP1Q9Y5B0 PRDX5-203ENST00000352435 596 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
CTDP1Q9Y5B0 TREM2-203ENST00000373122 1012 ntAPPRIS ALT2 TSL 1 (best) BASIC17.55■□□□□ 0.4
CTDP1Q9Y5B0 Z98752.1-201ENST00000442482 518 ntTSL 3 BASIC17.55■□□□□ 0.4
CTDP1Q9Y5B0 KRT8P13-201ENST00000463294 1010 ntBASIC17.55■□□□□ 0.4
CTDP1Q9Y5B0 PRPS2-205ENST00000489404 763 ntTSL 2 BASIC17.55■□□□□ 0.4
CTDP1Q9Y5B0 BTNL8-205ENST00000505126 1294 ntTSL 2 BASIC17.55■□□□□ 0.4
CTDP1Q9Y5B0 SELENOW-201ENST00000509570 881 ntTSL 5 BASIC17.55■□□□□ 0.4
CTDP1Q9Y5B0 PRCD-204ENST00000586148 630 ntAPPRIS P1 TSL 5 BASIC17.55■□□□□ 0.4
CTDP1Q9Y5B0 PRCD-210ENST00000592014 462 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
CTDP1Q9Y5B0 OCEL1-213ENST00000601529 942 ntTSL 3 BASIC17.55■□□□□ 0.4
CTDP1Q9Y5B0 LINC02028-216ENST00000609015 732 ntTSL 5 BASIC17.55■□□□□ 0.4
CTDP1Q9Y5B0 UPK1A-204ENST00000617999 1268 ntAPPRIS P1 TSL 5 BASIC17.55■□□□□ 0.4
CTDP1Q9Y5B0 PLEKHB1-202ENST00000354190 2380 ntAPPRIS P4 TSL 1 (best) BASIC17.55■□□□□ 0.4
CTDP1Q9Y5B0 KIF3C-201ENST00000264712 5344 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
CTDP1Q9Y5B0 SPATA18-202ENST00000419395 2816 ntTSL 2 BASIC17.55■□□□□ 0.4
CTDP1Q9Y5B0 FAM32A-201ENST00000263384 1455 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
CTDP1Q9Y5B0 CATSPER2P1-203ENST00000429276 1466 ntTSL 2 BASIC17.55■□□□□ 0.4
CTDP1Q9Y5B0 CBX3-203ENST00000409747 1717 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
CTDP1Q9Y5B0 TACC3-201ENST00000313288 2781 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
CTDP1Q9Y5B0 GHDC-202ENST00000414034 2496 ntTSL 2 BASIC17.55■□□□□ 0.4
Retrieved 100 of 98,524 protein–RNA pairs in 62.7 ms