Protein–RNA interactions for Protein: Q9Y3T6

R3HCC1, R3H and coiled-coil domain-containing protein 1, humanhuman

Known RBP Predictions only

Length 440 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
R3HCC1Q9Y3T6 DNAJC22-202ENST00000549441 4412 ntAPPRIS P1 TSL 2 BASIC17.57■□□□□ 0.4
R3HCC1Q9Y3T6 RBL1-201ENST00000344359 3225 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
R3HCC1Q9Y3T6 RARG-202ENST00000394426 2640 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
R3HCC1Q9Y3T6 PIGT-246ENST00000639499 2021 ntTSL 5 BASIC17.57■□□□□ 0.4
R3HCC1Q9Y3T6 CBLC-202ENST00000341505 1441 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
R3HCC1Q9Y3T6 CILP2-202ENST00000586018 4234 ntAPPRIS ALT1 TSL 2 BASIC17.57■□□□□ 0.4
R3HCC1Q9Y3T6 GADD45B-201ENST00000215631 1373 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
R3HCC1Q9Y3T6 TKT-201ENST00000296289 1931 ntTSL 5 BASIC17.57■□□□□ 0.4
R3HCC1Q9Y3T6 GLB1L3-201ENST00000389887 3566 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
R3HCC1Q9Y3T6 CERS6-202ENST00000392687 6851 ntAPPRIS ALT1 TSL 1 (best) BASIC17.57■□□□□ 0.4
R3HCC1Q9Y3T6 RER1-207ENST00000488353 2469 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
R3HCC1Q9Y3T6 ILF2-205ENST00000615950 1906 ntTSL 2 BASIC17.57■□□□□ 0.4
R3HCC1Q9Y3T6 PELP1-202ENST00000436683 3524 ntTSL 2 BASIC17.57■□□□□ 0.4
R3HCC1Q9Y3T6 TEAD3-204ENST00000639578 1308 ntAPPRIS P2 TSL 1 (best) BASIC17.57■□□□□ 0.4
R3HCC1Q9Y3T6 CREB3L2-204ENST00000456390 2360 ntTSL 2 BASIC17.57■□□□□ 0.4
R3HCC1Q9Y3T6 FOXRED1-213ENST00000532125 1825 ntAPPRIS ALT2 TSL 2 BASIC17.57■□□□□ 0.4
R3HCC1Q9Y3T6 ABTB2-201ENST00000435224 4902 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
R3HCC1Q9Y3T6 ACSM2A-209ENST00000573854 2837 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
R3HCC1Q9Y3T6 PPP6R2-203ENST00000395741 3304 ntAPPRIS ALT2 TSL 1 (best) BASIC17.57■□□□□ 0.4
R3HCC1Q9Y3T6 OR52W1-201ENST00000311352 1114 ntAPPRIS P1 BASIC17.57■□□□□ 0.4
R3HCC1Q9Y3T6 SNURF-201ENST00000338327 331 ntAPPRIS P1 TSL 5 BASIC17.57■□□□□ 0.4
R3HCC1Q9Y3T6 DDT-201ENST00000350608 671 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
R3HCC1Q9Y3T6 EFNA4-202ENST00000368409 1263 ntAPPRIS P3 TSL 1 (best) BASIC17.57■□□□□ 0.4
R3HCC1Q9Y3T6 CTDSP1-204ENST00000443891 1109 ntTSL 3 BASIC17.57■□□□□ 0.4
R3HCC1Q9Y3T6 SSNA1-204ENST00000464553 723 ntTSL 2 BASIC17.57■□□□□ 0.4
R3HCC1Q9Y3T6 PAEP-208ENST00000479141 990 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
R3HCC1Q9Y3T6 APBB2-208ENST00000504305 1274 ntTSL 5 BASIC17.57■□□□□ 0.4
R3HCC1Q9Y3T6 AC109322.1-201ENST00000524499 1264 ntBASIC17.57■□□□□ 0.4
R3HCC1Q9Y3T6 AKIP1-211ENST00000534506 576 ntTSL 3 BASIC17.57■□□□□ 0.4
R3HCC1Q9Y3T6 AC069262.1-201ENST00000539058 672 ntBASIC17.57■□□□□ 0.4
R3HCC1Q9Y3T6 AL512356.2-201ENST00000546955 174 ntBASIC17.57■□□□□ 0.4
R3HCC1Q9Y3T6 VPS29-207ENST00000549970 818 ntTSL 3 BASIC17.57■□□□□ 0.4
R3HCC1Q9Y3T6 AC090607.3-202ENST00000558971 383 ntTSL 3 BASIC17.57■□□□□ 0.4
R3HCC1Q9Y3T6 AC026979.3-201ENST00000607315 403 ntBASIC17.57■□□□□ 0.4
R3HCC1Q9Y3T6 GOLGA2-215ENST00000639983 1038 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
R3HCC1Q9Y3T6 FAM109A-201ENST00000361483 3256 ntAPPRIS ALT2 TSL 3 BASIC17.57■□□□□ 0.4
R3HCC1Q9Y3T6 TNK2-202ENST00000381916 4223 ntTSL 2 BASIC17.57■□□□□ 0.4
R3HCC1Q9Y3T6 HNRNPH1-204ENST00000442819 2248 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
R3HCC1Q9Y3T6 TRIM17-205ENST00000456946 1731 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
R3HCC1Q9Y3T6 OR2V1-202ENST00000641318 2665 ntAPPRIS P1 BASIC17.57■□□□□ 0.4
R3HCC1Q9Y3T6 ANO6-202ENST00000423947 5504 ntAPPRIS ALT2 TSL 1 (best) BASIC17.57■□□□□ 0.4
R3HCC1Q9Y3T6 RASSF1-205ENST00000395126 1657 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
R3HCC1Q9Y3T6 SYT12-203ENST00000525457 1678 ntAPPRIS P1 TSL 2 BASIC17.57■□□□□ 0.4
R3HCC1Q9Y3T6 NFATC4-207ENST00000553469 2566 ntAPPRIS ALT2 TSL 1 (best) BASIC17.57■□□□□ 0.4
R3HCC1Q9Y3T6 MED19-201ENST00000337672 1637 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
R3HCC1Q9Y3T6 NDRG2-209ENST00000397853 2079 ntAPPRIS P4 TSL 2 BASIC17.57■□□□□ 0.4
R3HCC1Q9Y3T6 CDYL2-203ENST00000562812 2086 ntAPPRIS ALT2 TSL 5 BASIC17.57■□□□□ 0.4
R3HCC1Q9Y3T6 CDYL2-204ENST00000563890 2086 ntAPPRIS ALT2 TSL 5 BASIC17.57■□□□□ 0.4
R3HCC1Q9Y3T6 CDYL2-205ENST00000566173 2086 ntAPPRIS ALT2 TSL 5 BASIC17.57■□□□□ 0.4
R3HCC1Q9Y3T6 COL17A1-201ENST00000353479 5734 ntAPPRIS P2 TSL 1 (best) BASIC17.57■□□□□ 0.4
R3HCC1Q9Y3T6 WNT3A-201ENST00000284523 2932 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
R3HCC1Q9Y3T6 AC087521.1-201ENST00000501541 2045 ntTSL 2 BASIC17.57■□□□□ 0.4
R3HCC1Q9Y3T6 GCM2-201ENST00000379491 2441 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
R3HCC1Q9Y3T6 FBRS-201ENST00000287468 2811 ntAPPRIS P1 TSL 5 BASIC17.57■□□□□ 0.4
R3HCC1Q9Y3T6 AC118758.2-201ENST00000614242 2813 ntBASIC17.57■□□□□ 0.4
R3HCC1Q9Y3T6 PGLYRP2-201ENST00000292609 2758 ntAPPRIS ALT2 TSL 1 (best) BASIC17.57■□□□□ 0.4
R3HCC1Q9Y3T6 FAM219A-209ENST00000445726 3644 ntAPPRIS ALT1 TSL 2 BASIC17.57■□□□□ 0.4
R3HCC1Q9Y3T6 FAM131A-203ENST00000383847 1483 ntAPPRIS P1 TSL 2 BASIC17.56■□□□□ 0.4
R3HCC1Q9Y3T6 OGFOD2-224ENST00000545612 1465 ntTSL 2 BASIC17.56■□□□□ 0.4
R3HCC1Q9Y3T6 RPL15-201ENST00000307839 2730 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
R3HCC1Q9Y3T6 GTF2IRD1-202ENST00000424337 3077 ntAPPRIS ALT1 TSL 1 (best) BASIC17.56■□□□□ 0.4
R3HCC1Q9Y3T6 ILDR1-202ENST00000344209 2226 ntAPPRIS ALT2 TSL 1 (best) BASIC17.56■□□□□ 0.4
R3HCC1Q9Y3T6 RELA-227ENST00000615805 2236 ntTSL 5 BASIC17.56■□□□□ 0.4
R3HCC1Q9Y3T6 TSSK3-201ENST00000373534 1368 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
R3HCC1Q9Y3T6 B3GNT4-202ENST00000535274 2938 ntAPPRIS P1 BASIC17.56■□□□□ 0.4
R3HCC1Q9Y3T6 DUOXA1-202ENST00000430224 1317 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
R3HCC1Q9Y3T6 AKNA-206ENST00000374088 5464 ntAPPRIS P2 TSL 2 BASIC17.56■□□□□ 0.4
R3HCC1Q9Y3T6 DNAJC22-201ENST00000395069 2059 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
R3HCC1Q9Y3T6 RIOK1-202ENST00000379834 2810 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
R3HCC1Q9Y3T6 FBXO34-201ENST00000313833 3464 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
R3HCC1Q9Y3T6 PPP1R15A-201ENST00000200453 2378 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
R3HCC1Q9Y3T6 CCDC12-201ENST00000292314 1017 ntTSL 5 BASIC17.56■□□□□ 0.4
R3HCC1Q9Y3T6 C11orf71-201ENST00000325636 652 ntAPPRIS P3 TSL 1 (best) BASIC17.56■□□□□ 0.4
R3HCC1Q9Y3T6 CCDC84-201ENST00000334418 1202 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
R3HCC1Q9Y3T6 AL139400.1-201ENST00000366220 510 ntBASIC17.56■□□□□ 0.4
R3HCC1Q9Y3T6 C6orf52-202ENST00000379586 430 ntAPPRIS ALT2 TSL 2 BASIC17.56■□□□□ 0.4
R3HCC1Q9Y3T6 PTTG1-202ENST00000393964 1070 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
R3HCC1Q9Y3T6 GGCT-205ENST00000409436 954 ntTSL 3 BASIC17.56■□□□□ 0.4
R3HCC1Q9Y3T6 SLC25A36-204ENST00000453248 1040 ntTSL 2 BASIC17.56■□□□□ 0.4
R3HCC1Q9Y3T6 MOB3A-209ENST00000592280 1071 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
R3HCC1Q9Y3T6 AL157832.3-201ENST00000635764 1005 ntTSL 5 BASIC17.56■□□□□ 0.4
R3HCC1Q9Y3T6 CD14-202ENST00000401743 1648 ntAPPRIS P1 TSL 3 BASIC17.56■□□□□ 0.4
R3HCC1Q9Y3T6 GNAS-215ENST00000371102 3438 ntTSL 5 BASIC17.56■□□□□ 0.4
R3HCC1Q9Y3T6 DOK5-201ENST00000262593 1963 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
R3HCC1Q9Y3T6 C14orf93-207ENST00000397382 1986 ntAPPRIS P1 TSL 5 BASIC17.56■□□□□ 0.4
R3HCC1Q9Y3T6 TMUB2-202ENST00000357984 1921 ntAPPRIS P3 TSL 1 (best) BASIC17.56■□□□□ 0.4
R3HCC1Q9Y3T6 ZNF362-201ENST00000373428 2936 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
R3HCC1Q9Y3T6 CCND3-201ENST00000372987 2233 ntTSL 2 BASIC17.56■□□□□ 0.4
R3HCC1Q9Y3T6 AL592424.1-201ENST00000563624 1536 ntBASIC17.56■□□□□ 0.4
R3HCC1Q9Y3T6 ATP4B-201ENST00000335288 1488 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
R3HCC1Q9Y3T6 POM121-202ENST00000395270 7011 ntAPPRIS ALT2 TSL 1 (best) BASIC17.56■□□□□ 0.4
R3HCC1Q9Y3T6 NPM1-201ENST00000296930 1758 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
R3HCC1Q9Y3T6 RNF166-210ENST00000568683 1768 ntTSL 3 BASIC17.56■□□□□ 0.4
R3HCC1Q9Y3T6 AP4B1-201ENST00000256658 2742 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
R3HCC1Q9Y3T6 OFD1-202ENST00000380550 3296 ntAPPRIS ALT2 TSL 1 (best) BASIC17.55■□□□□ 0.4
R3HCC1Q9Y3T6 ALAS2-201ENST00000330807 2027 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
R3HCC1Q9Y3T6 DNAJC3-AS1-201ENST00000499499 2908 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
R3HCC1Q9Y3T6 GPAT4-201ENST00000396987 6298 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
R3HCC1Q9Y3T6 LLGL2-209ENST00000578363 1393 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
R3HCC1Q9Y3T6 EIF2B3-201ENST00000360403 1659 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Retrieved 100 of 98,524 protein–RNA pairs in 39.6 ms