Protein–RNA interactions for Protein: Q9Y2P8

RCL1, RNA 3'-terminal phosphate cyclase-like protein, humanhuman

Known RBP Predictions only

Length 373 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RCL1Q9Y2P8 TOMM34-201ENST00000372813 2062 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.4
RCL1Q9Y2P8 SPG21-203ENST00000433215 1613 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.4
RCL1Q9Y2P8 POLR1D-207ENST00000621089 1606 ntTSL 1 (best) BASIC12.52□□□□□ -0.4
RCL1Q9Y2P8 FOXF1-201ENST00000262426 3516 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.4
RCL1Q9Y2P8 ARHGEF1-202ENST00000347545 3091 ntTSL 1 (best) BASIC12.52□□□□□ -0.4
RCL1Q9Y2P8 AL356275.1-201ENST00000638446 7440 ntTSL 5 BASIC12.52□□□□□ -0.4
RCL1Q9Y2P8 PRNP-201ENST00000379440 2657 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
RCL1Q9Y2P8 NMNAT3-203ENST00000413939 1711 ntTSL 2 BASIC12.52□□□□□ -0.41
RCL1Q9Y2P8 HEY1-202ENST00000354724 2293 ntAPPRIS P3 TSL 1 (best) BASIC12.52□□□□□ -0.41
RCL1Q9Y2P8 FXYD6-207ENST00000527717 1799 ntAPPRIS P2 TSL 2 BASIC12.52□□□□□ -0.41
RCL1Q9Y2P8 CCDC84-201ENST00000334418 1202 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
RCL1Q9Y2P8 LCN8-201ENST00000371688 867 ntAPPRIS P2 TSL 1 (best) BASIC12.52□□□□□ -0.41
RCL1Q9Y2P8 SYS1-202ENST00000372727 813 ntAPPRIS P1 TSL 3 BASIC12.52□□□□□ -0.41
RCL1Q9Y2P8 FAM220BP-201ENST00000377689 816 ntBASIC12.52□□□□□ -0.41
RCL1Q9Y2P8 CCDC107-204ENST00000378409 1173 ntAPPRIS ALT2 TSL 1 (best) BASIC12.52□□□□□ -0.41
RCL1Q9Y2P8 FAM19A5-204ENST00000406880 833 ntTSL 3 BASIC12.52□□□□□ -0.41
RCL1Q9Y2P8 CRCP-205ENST00000431089 942 ntTSL 2 BASIC12.52□□□□□ -0.41
RCL1Q9Y2P8 KRT18P67-201ENST00000432816 1264 ntBASIC12.52□□□□□ -0.41
RCL1Q9Y2P8 AC009947.1-201ENST00000444350 727 ntBASIC12.52□□□□□ -0.41
RCL1Q9Y2P8 FAM197Y8-203ENST00000450145 560 ntBASIC12.52□□□□□ -0.41
RCL1Q9Y2P8 AF186996.4-201ENST00000467186 377 ntBASIC12.52□□□□□ -0.41
RCL1Q9Y2P8 AL160313.1-201ENST00000502101 1039 ntTSL 1 (best) BASIC12.52□□□□□ -0.41
RCL1Q9Y2P8 NAALADL1-207ENST00000526799 959 ntTSL 5 BASIC12.52□□□□□ -0.41
RCL1Q9Y2P8 NDUFAB1-205ENST00000570319 885 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
RCL1Q9Y2P8 RMI2-205ENST00000576027 818 ntTSL 2 BASIC12.52□□□□□ -0.41
RCL1Q9Y2P8 AC132938.3-201ENST00000579095 357 ntTSL 2 BASIC12.52□□□□□ -0.41
RCL1Q9Y2P8 AQP6-205ENST00000618286 829 ntTSL 5 BASIC12.52□□□□□ -0.41
RCL1Q9Y2P8 FAM215A-202ENST00000632077 792 ntBASIC12.52□□□□□ -0.41
RCL1Q9Y2P8 MKRN3-201ENST00000314520 2337 ntAPPRIS P1 BASIC12.52□□□□□ -0.41
RCL1Q9Y2P8 SDCBP2-AS1-201ENST00000446423 1811 ntTSL 2 BASIC12.52□□□□□ -0.41
RCL1Q9Y2P8 CDK2AP1-205ENST00000542174 1812 ntTSL 2 BASIC12.52□□□□□ -0.41
RCL1Q9Y2P8 CIAPIN1-207ENST00000565961 1814 ntTSL 3 BASIC12.52□□□□□ -0.41
RCL1Q9Y2P8 GPER1-203ENST00000397092 2971 ntAPPRIS P1 TSL 2 BASIC12.52□□□□□ -0.41
RCL1Q9Y2P8 PDGFRL-201ENST00000251630 1901 ntAPPRIS P1 TSL 5 BASIC12.52□□□□□ -0.41
RCL1Q9Y2P8 CHRNG-201ENST00000389492 1398 ntTSL 1 (best) BASIC12.52□□□□□ -0.41
RCL1Q9Y2P8 REXO1L4P-201ENST00000605109 1937 ntBASIC12.52□□□□□ -0.41
RCL1Q9Y2P8 CASC2-202ENST00000426021 3232 ntTSL 1 (best) BASIC12.52□□□□□ -0.41
RCL1Q9Y2P8 RAB38-201ENST00000243662 1465 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
RCL1Q9Y2P8 MYRF-203ENST00000389602 2052 ntTSL 2 BASIC12.52□□□□□ -0.41
RCL1Q9Y2P8 ABCA2-203ENST00000371605 8151 ntAPPRIS ALT2 TSL 2 BASIC12.52□□□□□ -0.41
RCL1Q9Y2P8 CELF1-201ENST00000310513 4583 ntAPPRIS ALT1 TSL 1 (best) BASIC12.52□□□□□ -0.41
RCL1Q9Y2P8 PDE6G-204ENST00000573076 1505 ntTSL 1 (best) BASIC12.52□□□□□ -0.41
RCL1Q9Y2P8 ISLR-202ENST00000395118 2175 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
RCL1Q9Y2P8 GCC1-201ENST00000321407 4149 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
RCL1Q9Y2P8 PLCD1-204ENST00000463876 2963 ntAPPRIS ALT1 TSL 2 BASIC12.51□□□□□ -0.41
RCL1Q9Y2P8 AC108134.1-201ENST00000382225 3061 ntTSL 2 BASIC12.51□□□□□ -0.41
RCL1Q9Y2P8 LRRC42-201ENST00000319223 1727 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
RCL1Q9Y2P8 SEPT8-212ENST00000458488 1726 ntTSL 5 BASIC12.51□□□□□ -0.41
RCL1Q9Y2P8 AC109583.3-201ENST00000641183 3128 ntAPPRIS P1 BASIC12.51□□□□□ -0.41
RCL1Q9Y2P8 CYP1B1-AS1-201ENST00000413828 1781 ntTSL 5 BASIC12.51□□□□□ -0.41
RCL1Q9Y2P8 AC055811.4-201ENST00000624039 1754 ntBASIC12.51□□□□□ -0.41
RCL1Q9Y2P8 HDAC9-208ENST00000417496 2524 ntTSL 2 BASIC12.51□□□□□ -0.41
RCL1Q9Y2P8 POLN-210ENST00000511885 3253 ntAPPRIS P1 TSL 5 BASIC12.51□□□□□ -0.41
RCL1Q9Y2P8 DOCK4-206ENST00000437633 6212 ntAPPRIS P2 TSL 1 (best) BASIC12.51□□□□□ -0.41
RCL1Q9Y2P8 PDZD7-206ENST00000619208 4135 ntAPPRIS P1 TSL 5 BASIC12.51□□□□□ -0.41
RCL1Q9Y2P8 NAXD-201ENST00000309957 2659 ntAPPRIS P1 TSL 2 BASIC12.51□□□□□ -0.41
RCL1Q9Y2P8 PRAME-214ENST00000543184 2758 ntAPPRIS P2 TSL 1 (best) BASIC12.51□□□□□ -0.41
RCL1Q9Y2P8 PRR12-203ENST00000615927 4479 ntAPPRIS ALT2 TSL 5 BASIC12.51□□□□□ -0.41
RCL1Q9Y2P8 MKL1-202ENST00000396617 4505 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
RCL1Q9Y2P8 KDM2B-202ENST00000377071 4595 ntAPPRIS P4 TSL 1 (best) BASIC12.51□□□□□ -0.41
RCL1Q9Y2P8 UMODL1-204ENST00000400427 5442 ntAPPRIS ALT2 TSL 1 (best) BASIC12.51□□□□□ -0.41
RCL1Q9Y2P8 DUSP18-204ENST00000403268 2920 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
RCL1Q9Y2P8 RNF151-201ENST00000321392 786 ntAPPRIS ALT2 TSL 1 (best) BASIC12.51□□□□□ -0.41
RCL1Q9Y2P8 KCNIP2-208ENST00000370046 923 ntTSL 5 BASIC12.51□□□□□ -0.41
RCL1Q9Y2P8 GUK1-210ENST00000391865 990 ntAPPRIS ALT1 TSL 1 (best) BASIC12.51□□□□□ -0.41
RCL1Q9Y2P8 AC142381.1-201ENST00000426099 345 ntBASIC12.51□□□□□ -0.41
RCL1Q9Y2P8 AL669831.5-201ENST00000434264 844 ntTSL 5 BASIC12.51□□□□□ -0.41
RCL1Q9Y2P8 NME4-207ENST00000450036 985 ntTSL 3 BASIC12.51□□□□□ -0.41
RCL1Q9Y2P8 HFE-210ENST00000470149 1123 ntAPPRIS ALT2 TSL 1 (best) BASIC12.51□□□□□ -0.41
RCL1Q9Y2P8 GSTK1-207ENST00000479303 1185 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
RCL1Q9Y2P8 AC136601.1-201ENST00000521803 666 ntTSL 3 BASIC12.51□□□□□ -0.41
RCL1Q9Y2P8 NAALADL1-208ENST00000528884 973 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
RCL1Q9Y2P8 MARVELD3-206ENST00000567566 850 ntAPPRIS ALT2 TSL 1 (best) BASIC12.51□□□□□ -0.41
RCL1Q9Y2P8 RNF151-203ENST00000569714 796 ntAPPRIS P2 TSL 1 (best) BASIC12.51□□□□□ -0.41
RCL1Q9Y2P8 AC087392.4-201ENST00000574560 486 ntTSL 3 BASIC12.51□□□□□ -0.41
RCL1Q9Y2P8 AC068594.1-202ENST00000581657 749 ntTSL 3 BASIC12.51□□□□□ -0.41
RCL1Q9Y2P8 HIF3A-218ENST00000600383 2101 ntTSL 2 BASIC12.51□□□□□ -0.41
RCL1Q9Y2P8 AL031008.1-201ENST00000619963 541 ntBASIC12.51□□□□□ -0.41
RCL1Q9Y2P8 TUBGCP3-201ENST00000261965 3899 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
RCL1Q9Y2P8 CDKL3-206ENST00000521118 2160 ntAPPRIS ALT2 TSL 5 BASIC12.51□□□□□ -0.41
RCL1Q9Y2P8 TIGD6-201ENST00000296736 4006 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
RCL1Q9Y2P8 ARHGEF37-201ENST00000333677 4968 ntAPPRIS P1 TSL 2 BASIC12.51□□□□□ -0.41
RCL1Q9Y2P8 CRYBG2-201ENST00000308182 5245 ntAPPRIS P5 TSL 5 BASIC12.51□□□□□ -0.41
RCL1Q9Y2P8 C16orf89-202ENST00000472572 1444 ntAPPRIS ALT2 TSL 1 (best) BASIC12.51□□□□□ -0.41
RCL1Q9Y2P8 AC025580.3-201ENST00000617932 1424 ntBASIC12.51□□□□□ -0.41
RCL1Q9Y2P8 CD1E-212ENST00000368167 1458 ntAPPRIS P4 TSL 1 (best) BASIC12.51□□□□□ -0.41
RCL1Q9Y2P8 AC012508.2-201ENST00000567613 1472 ntBASIC12.51□□□□□ -0.41
RCL1Q9Y2P8 IGF2-203ENST00000381395 4527 ntAPPRIS P2 TSL 2 BASIC12.51□□□□□ -0.41
RCL1Q9Y2P8 CPSF7-205ENST00000439958 3524 ntAPPRIS ALT1 TSL 1 (best) BASIC12.51□□□□□ -0.41
RCL1Q9Y2P8 PRNP-203ENST00000430350 2539 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
RCL1Q9Y2P8 ZNF718-202ENST00000609714 2772 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
RCL1Q9Y2P8 C2orf68-202ENST00000409734 1722 ntTSL 2 BASIC12.51□□□□□ -0.41
RCL1Q9Y2P8 ZSCAN32-205ENST00000439568 1746 ntTSL 2 BASIC12.51□□□□□ -0.41
RCL1Q9Y2P8 FGF7P3-202ENST00000640245 1707 ntTSL 4 BASIC12.51□□□□□ -0.41
RCL1Q9Y2P8 B3GNTL1-211ENST00000576599 1787 ntTSL 2 BASIC12.51□□□□□ -0.41
RCL1Q9Y2P8 ADAMTS10-201ENST00000270328 4194 ntAPPRIS P1 TSL 5 BASIC12.51□□□□□ -0.41
RCL1Q9Y2P8 GRM7-215ENST00000486284 4241 ntAPPRIS ALT2 TSL 5 BASIC12.51□□□□□ -0.41
RCL1Q9Y2P8 PNLDC1-202ENST00000392167 1816 ntAPPRIS P1 TSL 2 BASIC12.51□□□□□ -0.41
RCL1Q9Y2P8 SPATS2-203ENST00000547865 1810 ntTSL 2 BASIC12.51□□□□□ -0.41
RCL1Q9Y2P8 MAPRE2-201ENST00000300249 4265 ntAPPRIS P3 TSL 1 (best) BASIC12.51□□□□□ -0.41
Retrieved 100 of 98,524 protein–RNA pairs in 73 ms