Protein–RNA interactions for Protein: Q9Y2J0

RPH3A, Rabphilin-3A, humanhuman

Predicted RBP Predictions only

Length 694 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RPH3AQ9Y2J0 MIR658-201ENST00000385210 100 ntBASIC14.06□□□□□ -0.16
RPH3AQ9Y2J0 TPSD1-202ENST00000397534 896 ntAPPRIS ALT2 TSL 5 BASIC14.06□□□□□ -0.16
RPH3AQ9Y2J0 HMGB2-203ENST00000446922 1175 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
RPH3AQ9Y2J0 PFN2-205ENST00000461868 613 ntTSL 2 BASIC14.06□□□□□ -0.16
RPH3AQ9Y2J0 AC106886.1-201ENST00000568660 600 ntBASIC14.06□□□□□ -0.16
RPH3AQ9Y2J0 AC129507.3-201ENST00000571512 913 ntTSL 2 BASIC14.06□□□□□ -0.16
RPH3AQ9Y2J0 AC132938.2-201ENST00000579188 680 ntBASIC14.06□□□□□ -0.16
RPH3AQ9Y2J0 AC005253.2-201ENST00000593791 432 ntTSL 3 BASIC14.06□□□□□ -0.16
RPH3AQ9Y2J0 ZNF83-215ENST00000600714 810 ntTSL 3 BASIC14.06□□□□□ -0.16
RPH3AQ9Y2J0 CU634019.7-201ENST00000624153 1185 ntBASIC14.06□□□□□ -0.16
RPH3AQ9Y2J0 FP236241.2-201ENST00000624906 1185 ntBASIC14.06□□□□□ -0.16
RPH3AQ9Y2J0 AL591163.1-201ENST00000641757 987 ntBASIC14.06□□□□□ -0.16
RPH3AQ9Y2J0 KSR1-216ENST00000582410 2392 ntTSL 2 BASIC14.06□□□□□ -0.16
RPH3AQ9Y2J0 C9orf139-202ENST00000623196 4990 ntTSL 2 BASIC14.06□□□□□ -0.16
RPH3AQ9Y2J0 KLF5-201ENST00000377687 3566 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
RPH3AQ9Y2J0 NDRG2-207ENST00000397847 2084 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
RPH3AQ9Y2J0 PRMT2-202ENST00000334494 1334 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
RPH3AQ9Y2J0 NOL9-201ENST00000377705 6649 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
RPH3AQ9Y2J0 STYXL1-203ENST00000359697 1374 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
RPH3AQ9Y2J0 PODN-201ENST00000312553 3010 ntAPPRIS P3 TSL 1 (best) BASIC14.06□□□□□ -0.16
RPH3AQ9Y2J0 ACKR3-201ENST00000272928 2203 ntAPPRIS P1 TSL 2 BASIC14.06□□□□□ -0.16
RPH3AQ9Y2J0 TRIP10-210ENST00000600428 2249 ntTSL 5 BASIC14.06□□□□□ -0.16
RPH3AQ9Y2J0 TFB2M-201ENST00000366514 1848 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
RPH3AQ9Y2J0 CNN1-210ENST00000592923 1848 ntTSL 2 BASIC14.06□□□□□ -0.16
RPH3AQ9Y2J0 KRT8P22-201ENST00000562317 1415 ntBASIC14.06□□□□□ -0.16
RPH3AQ9Y2J0 RAB38-201ENST00000243662 1465 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
RPH3AQ9Y2J0 ICAM3-201ENST00000160262 1934 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
RPH3AQ9Y2J0 USP47-207ENST00000527733 4525 ntAPPRIS P3 TSL 1 (best) BASIC14.05□□□□□ -0.16
RPH3AQ9Y2J0 NFE2L1-214ENST00000582155 1998 ntTSL 2 BASIC14.05□□□□□ -0.16
RPH3AQ9Y2J0 AC009133.1-201ENST00000569981 2449 ntTSL 2 BASIC14.05□□□□□ -0.16
RPH3AQ9Y2J0 CPEB3-201ENST00000265997 4851 ntAPPRIS P3 TSL 1 (best) BASIC14.05□□□□□ -0.16
RPH3AQ9Y2J0 SEC14L4-204ENST00000381982 1603 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
RPH3AQ9Y2J0 LAP3-211ENST00000618908 2100 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
RPH3AQ9Y2J0 MAPK7-204ENST00000395604 3077 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
RPH3AQ9Y2J0 STIP1-201ENST00000305218 2196 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
RPH3AQ9Y2J0 DCBLD1-202ENST00000338728 3626 ntAPPRIS ALT2 TSL 5 BASIC14.05□□□□□ -0.16
RPH3AQ9Y2J0 PCCB-204ENST00000462637 1715 ntAPPRIS ALT2 TSL 3 BASIC14.05□□□□□ -0.16
RPH3AQ9Y2J0 FOXR1-201ENST00000317011 1159 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
RPH3AQ9Y2J0 KIAA0907-201ENST00000368319 1155 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
RPH3AQ9Y2J0 KRTAP10-2-201ENST00000391621 1149 ntAPPRIS P1 BASIC14.05□□□□□ -0.16
RPH3AQ9Y2J0 MIOX-203ENST00000395733 1021 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
RPH3AQ9Y2J0 SZT2-AS1-201ENST00000396885 699 ntTSL 3 BASIC14.05□□□□□ -0.16
RPH3AQ9Y2J0 SOCS2P1-201ENST00000417727 557 ntBASIC14.05□□□□□ -0.16
RPH3AQ9Y2J0 THPO-202ENST00000421442 1132 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
RPH3AQ9Y2J0 LNCPRESS1-201ENST00000429254 756 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
RPH3AQ9Y2J0 KCNQ1DN-201ENST00000441418 1093 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
RPH3AQ9Y2J0 TMEM147-AS1-201ENST00000444728 487 ntTSL 3 BASIC14.05□□□□□ -0.16
RPH3AQ9Y2J0 RN7SL837P-201ENST00000463010 287 ntBASIC14.05□□□□□ -0.16
RPH3AQ9Y2J0 HOXB3-204ENST00000465120 943 ntTSL 3 BASIC14.05□□□□□ -0.16
RPH3AQ9Y2J0 PARP8-218ENST00000513738 596 ntTSL 4 BASIC14.05□□□□□ -0.16
RPH3AQ9Y2J0 AC120045.2-201ENST00000567334 178 ntBASIC14.05□□□□□ -0.16
RPH3AQ9Y2J0 AC010327.1-201ENST00000587871 975 ntAPPRIS P1 TSL 5 BASIC14.05□□□□□ -0.16
RPH3AQ9Y2J0 TRAPPC6A-204ENST00000588062 695 ntTSL 2 BASIC14.05□□□□□ -0.16
RPH3AQ9Y2J0 TXNL4A-212ENST00000592957 546 ntTSL 3 BASIC14.05□□□□□ -0.16
RPH3AQ9Y2J0 APOBEC3H-206ENST00000613677 730 ntAPPRIS ALT2 TSL 5 BASIC14.05□□□□□ -0.16
RPH3AQ9Y2J0 AC243829.4-204ENST00000616926 1115 ntTSL 5 BASIC14.05□□□□□ -0.16
RPH3AQ9Y2J0 KISS1-202ENST00000625357 435 ntAPPRIS ALT2 TSL 5 BASIC14.05□□□□□ -0.16
RPH3AQ9Y2J0 AL353803.2-201ENST00000436510 1846 ntTSL 5 BASIC14.05□□□□□ -0.16
RPH3AQ9Y2J0 HNRNPK-204ENST00000376263 2942 ntAPPRIS P4 TSL 1 (best) BASIC14.05□□□□□ -0.16
RPH3AQ9Y2J0 RAI14-202ENST00000428746 5064 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
RPH3AQ9Y2J0 IGSF1-204ENST00000370903 4594 ntAPPRIS ALT2 TSL 1 (best) BASIC14.05□□□□□ -0.16
RPH3AQ9Y2J0 ASCL1-201ENST00000266744 2472 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
RPH3AQ9Y2J0 ELMO3-201ENST00000360833 2480 ntAPPRIS ALT2 TSL 2 BASIC14.05□□□□□ -0.16
RPH3AQ9Y2J0 MAGI1-216ENST00000497477 3555 ntTSL 5 BASIC14.05□□□□□ -0.16
RPH3AQ9Y2J0 GPS1-227ENST00000623761 1943 ntTSL 2 BASIC14.05□□□□□ -0.16
RPH3AQ9Y2J0 GRAMD1C-201ENST00000358160 4177 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
RPH3AQ9Y2J0 DRD5P1-201ENST00000456605 1438 ntBASIC14.05□□□□□ -0.16
RPH3AQ9Y2J0 P3H1-202ENST00000296388 2585 ntAPPRIS P3 TSL 1 (best) BASIC14.05□□□□□ -0.16
RPH3AQ9Y2J0 ANKMY2-201ENST00000306999 2555 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
RPH3AQ9Y2J0 AGPAT1-202ENST00000375104 2017 ntAPPRIS P1 TSL 2 BASIC14.05□□□□□ -0.16
RPH3AQ9Y2J0 ABTB2-201ENST00000435224 4902 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
RPH3AQ9Y2J0 TICRR-202ENST00000560985 6656 ntAPPRIS ALT2 TSL 1 (best) BASIC14.05□□□□□ -0.16
RPH3AQ9Y2J0 DMPK-202ENST00000343373 3227 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
RPH3AQ9Y2J0 DMRT2-202ENST00000302441 1495 ntTSL 5 BASIC14.05□□□□□ -0.16
RPH3AQ9Y2J0 CTIF-202ENST00000382998 4407 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
RPH3AQ9Y2J0 GORAB-202ENST00000367763 2189 ntAPPRIS P1 TSL 2 BASIC14.05□□□□□ -0.16
RPH3AQ9Y2J0 ITGB2-208ENST00000397857 2813 ntAPPRIS P1 TSL 5 BASIC14.05□□□□□ -0.16
RPH3AQ9Y2J0 AC091100.1-201ENST00000558424 2354 ntTSL 2 BASIC14.04□□□□□ -0.16
RPH3AQ9Y2J0 SLC47A1-203ENST00000436810 1719 ntTSL 2 BASIC14.04□□□□□ -0.16
RPH3AQ9Y2J0 MGMT-201ENST00000306010 1759 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
RPH3AQ9Y2J0 MLKL-201ENST00000306247 1781 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
RPH3AQ9Y2J0 EPHA2-201ENST00000358432 3964 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
RPH3AQ9Y2J0 STK33-217ENST00000534493 1895 ntTSL 2 BASIC14.04□□□□□ -0.16
RPH3AQ9Y2J0 THEMIS2-202ENST00000373921 2687 ntAPPRIS P1 TSL 5 BASIC14.04□□□□□ -0.16
RPH3AQ9Y2J0 SNPH-202ENST00000381873 4995 ntAPPRIS P3 TSL 1 (best) BASIC14.04□□□□□ -0.16
RPH3AQ9Y2J0 CHRFAM7A-203ENST00000401522 1913 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
RPH3AQ9Y2J0 ROPN1-203ENST00000459660 1909 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
RPH3AQ9Y2J0 PDLIM5-202ENST00000318007 1960 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
RPH3AQ9Y2J0 ZNF620-202ENST00000418905 2022 ntTSL 2 BASIC14.04□□□□□ -0.16
RPH3AQ9Y2J0 STK17B-201ENST00000263955 5287 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
RPH3AQ9Y2J0 TAS1R1-201ENST00000333172 2892 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
RPH3AQ9Y2J0 ZNF219-202ENST00000421093 2908 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
RPH3AQ9Y2J0 BUD31-201ENST00000222969 1035 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
RPH3AQ9Y2J0 TSFM-201ENST00000323833 1218 ntAPPRIS ALT2 TSL 1 (best) BASIC14.04□□□□□ -0.16
RPH3AQ9Y2J0 SPAG11A-201ENST00000326558 612 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
RPH3AQ9Y2J0 POLDIP3-202ENST00000339677 783 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
RPH3AQ9Y2J0 FANK1-204ENST00000368695 1296 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
RPH3AQ9Y2J0 GSTO1-201ENST00000369710 900 ntTSL 2 BASIC14.04□□□□□ -0.16
RPH3AQ9Y2J0 LDLRAD1-201ENST00000371360 785 ntAPPRIS P3 TSL 1 (best) BASIC14.04□□□□□ -0.16
RPH3AQ9Y2J0 MXI1-205ENST00000393134 889 ntTSL 2 BASIC14.04□□□□□ -0.16
Retrieved 100 of 98,524 protein–RNA pairs in 58.7 ms