Protein–RNA interactions for Protein: Q9UND3

NPIPA1, Nuclear pore complex-interacting protein family member A1, humanhuman

Predictions only

Length 350 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NPIPA1Q9UND3 AC106760.1-201ENST00000508690 800 ntBASIC14.1□□□□□ -0.15
NPIPA1Q9UND3 HOXC-AS3-201ENST00000509870 544 ntTSL 4 BASIC14.1□□□□□ -0.15
NPIPA1Q9UND3 AC026410.3-201ENST00000514280 936 ntBASIC14.1□□□□□ -0.15
NPIPA1Q9UND3 PACS1-203ENST00000524815 628 ntTSL 4 BASIC14.1□□□□□ -0.15
NPIPA1Q9UND3 AL122035.1-201ENST00000556640 550 ntTSL 2 BASIC14.1□□□□□ -0.15
NPIPA1Q9UND3 AL118558.1-202ENST00000557242 451 ntTSL 3 BASIC14.1□□□□□ -0.15
NPIPA1Q9UND3 CHRNA5-203ENST00000559554 1051 ntTSL 3 BASIC14.1□□□□□ -0.15
NPIPA1Q9UND3 CX3CL1-203ENST00000564948 563 ntTSL 3 BASIC14.1□□□□□ -0.15
NPIPA1Q9UND3 AIPL1-204ENST00000570466 1196 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
NPIPA1Q9UND3 IFT20-206ENST00000578122 834 ntTSL 2 BASIC14.1□□□□□ -0.15
NPIPA1Q9UND3 IFT20-208ENST00000578985 831 ntTSL 3 BASIC14.1□□□□□ -0.15
NPIPA1Q9UND3 MIR4525-201ENST00000580000 75 ntBASIC14.1□□□□□ -0.15
NPIPA1Q9UND3 FZD5-201ENST00000295417 6708 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
NPIPA1Q9UND3 BMP7-201ENST00000395863 4013 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
NPIPA1Q9UND3 FOXRED1-201ENST00000263578 1970 ntAPPRIS P2 TSL 1 (best) BASIC14.1□□□□□ -0.15
NPIPA1Q9UND3 ZC3H4-201ENST00000253048 6119 ntAPPRIS P2 TSL 1 (best) BASIC14.1□□□□□ -0.15
NPIPA1Q9UND3 FOLH1-202ENST00000340334 2697 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
NPIPA1Q9UND3 JADE2-203ENST00000395003 6465 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
NPIPA1Q9UND3 FOXH1-201ENST00000377317 2503 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
NPIPA1Q9UND3 NRBP1-201ENST00000233557 2887 ntAPPRIS P1 TSL 2 BASIC14.1□□□□□ -0.15
NPIPA1Q9UND3 YTHDF3-216ENST00000623280 5193 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
NPIPA1Q9UND3 MUTYH-211ENST00000456914 1692 ntAPPRIS ALT2 TSL 1 (best) BASIC14.1□□□□□ -0.15
NPIPA1Q9UND3 BID-213ENST00000615414 2236 ntTSL 5 BASIC14.1□□□□□ -0.15
NPIPA1Q9UND3 MOG-215ENST00000376888 1529 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
NPIPA1Q9UND3 CAAP1-206ENST00000625311 1532 ntTSL 2 BASIC14.1□□□□□ -0.15
NPIPA1Q9UND3 TVP23C-210ENST00000584811 2989 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
NPIPA1Q9UND3 MKS1-204ENST00000537529 2083 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
NPIPA1Q9UND3 NACC1-201ENST00000292431 4445 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
NPIPA1Q9UND3 NLRX1-202ENST00000409109 4092 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
NPIPA1Q9UND3 CES4A-207ENST00000540947 2284 ntAPPRIS P2 TSL 2 BASIC14.1□□□□□ -0.15
NPIPA1Q9UND3 AC009090.5-201ENST00000624886 2285 ntBASIC14.1□□□□□ -0.15
NPIPA1Q9UND3 PRICKLE1-201ENST00000345127 5902 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
NPIPA1Q9UND3 ANKRD33-201ENST00000301190 1935 ntTSL 2 BASIC14.09□□□□□ -0.15
NPIPA1Q9UND3 AL355493.2-201ENST00000568270 1395 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
NPIPA1Q9UND3 GMPR2-231ENST00000620807 1910 ntTSL 5 BASIC14.09□□□□□ -0.15
NPIPA1Q9UND3 ZFPM2-201ENST00000407775 4700 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
NPIPA1Q9UND3 TOM1-209ENST00000447733 2317 ntTSL 2 BASIC14.09□□□□□ -0.15
NPIPA1Q9UND3 CTSD-207ENST00000636571 1790 ntAPPRIS ALT2 TSL 5 BASIC14.09□□□□□ -0.15
NPIPA1Q9UND3 NR2E3-202ENST00000617575 1998 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
NPIPA1Q9UND3 PGPEP1-201ENST00000252813 1409 ntTSL 2 BASIC14.09□□□□□ -0.15
NPIPA1Q9UND3 CD2BP2-203ENST00000569466 1417 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
NPIPA1Q9UND3 GLI2-203ENST00000361492 6768 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
NPIPA1Q9UND3 STXBP6-201ENST00000323944 4132 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
NPIPA1Q9UND3 PNLDC1-202ENST00000392167 1816 ntAPPRIS P1 TSL 2 BASIC14.09□□□□□ -0.15
NPIPA1Q9UND3 ARHGEF7-214ENST00000478679 1833 ntTSL 2 BASIC14.09□□□□□ -0.15
NPIPA1Q9UND3 PGR-210ENST00000619228 3038 ntTSL 5 BASIC14.09□□□□□ -0.15
NPIPA1Q9UND3 OR10H1-201ENST00000334920 1124 ntAPPRIS P1 BASIC14.09□□□□□ -0.15
NPIPA1Q9UND3 PRKN-201ENST00000338468 1276 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
NPIPA1Q9UND3 EDN2-201ENST00000372587 1241 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
NPIPA1Q9UND3 APOC3-202ENST00000375345 604 ntTSL 5 BASIC14.09□□□□□ -0.15
NPIPA1Q9UND3 KRTAP1-4-201ENST00000377747 408 ntAPPRIS P1 BASIC14.09□□□□□ -0.15
NPIPA1Q9UND3 NME2-201ENST00000393183 568 ntTSL 2 BASIC14.09□□□□□ -0.15
NPIPA1Q9UND3 AL133267.1-201ENST00000398220 340 ntBASIC14.09□□□□□ -0.15
NPIPA1Q9UND3 SELENOM-202ENST00000402395 1054 ntAPPRIS P2 TSL 1 (best) BASIC14.09□□□□□ -0.15
NPIPA1Q9UND3 AC007405.2-202ENST00000418106 540 ntTSL 4 BASIC14.09□□□□□ -0.15
NPIPA1Q9UND3 HIST2H2BA-202ENST00000430394 752 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
NPIPA1Q9UND3 AL929472.3-201ENST00000433474 700 ntTSL 5 BASIC14.09□□□□□ -0.15
NPIPA1Q9UND3 C2orf27AP3-201ENST00000434123 579 ntBASIC14.09□□□□□ -0.15
NPIPA1Q9UND3 ACTBP11-201ENST00000436287 1126 ntBASIC14.09□□□□□ -0.15
NPIPA1Q9UND3 AC078785.1-203ENST00000467342 573 ntTSL 4 BASIC14.09□□□□□ -0.15
NPIPA1Q9UND3 STARD4-205ENST00000505803 803 ntAPPRIS P1 TSL 2 BASIC14.09□□□□□ -0.15
NPIPA1Q9UND3 STARD4-207ENST00000509887 1186 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
NPIPA1Q9UND3 RMDN1-212ENST00000519966 1164 ntTSL 2 BASIC14.09□□□□□ -0.15
NPIPA1Q9UND3 NAALADL1-207ENST00000526799 959 ntTSL 5 BASIC14.09□□□□□ -0.15
NPIPA1Q9UND3 FAM8A2P-201ENST00000528813 1142 ntBASIC14.09□□□□□ -0.15
NPIPA1Q9UND3 USB1-203ENST00000539737 1212 ntTSL 2 BASIC14.09□□□□□ -0.15
NPIPA1Q9UND3 AC000032.1-201ENST00000562538 491 ntTSL 2 BASIC14.09□□□□□ -0.15
NPIPA1Q9UND3 AC009134.1-201ENST00000571939 443 ntTSL 3 BASIC14.09□□□□□ -0.15
NPIPA1Q9UND3 ZNF790-AS1-204ENST00000589556 650 ntTSL 2 BASIC14.09□□□□□ -0.15
NPIPA1Q9UND3 TECR-207ENST00000596073 1170 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
NPIPA1Q9UND3 TECR-220ENST00000600083 1204 ntTSL 2 BASIC14.09□□□□□ -0.15
NPIPA1Q9UND3 AC093813.1-201ENST00000605066 256 ntBASIC14.09□□□□□ -0.15
NPIPA1Q9UND3 AC107373.2-201ENST00000607735 490 ntBASIC14.09□□□□□ -0.15
NPIPA1Q9UND3 AC244669.2-201ENST00000612320 853 ntBASIC14.09□□□□□ -0.15
NPIPA1Q9UND3 AL354718.3-201ENST00000616414 581 ntBASIC14.09□□□□□ -0.15
NPIPA1Q9UND3 CR382287.1-201ENST00000623954 586 ntBASIC14.09□□□□□ -0.15
NPIPA1Q9UND3 LARGE1-201ENST00000354992 4409 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
NPIPA1Q9UND3 LINC01205-202ENST00000497996 1493 ntTSL 2 BASIC14.09□□□□□ -0.15
NPIPA1Q9UND3 GPAT2-204ENST00000453542 2466 ntTSL 2 BASIC14.09□□□□□ -0.15
NPIPA1Q9UND3 TLL1-201ENST00000061240 6708 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
NPIPA1Q9UND3 SGK2-206ENST00000423407 1915 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
NPIPA1Q9UND3 PDGFRL-203ENST00000541323 1905 ntAPPRIS P1 TSL 2 BASIC14.09□□□□□ -0.15
NPIPA1Q9UND3 RECQL5-202ENST00000340830 1749 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
NPIPA1Q9UND3 DMAP1-203ENST00000372289 1730 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
NPIPA1Q9UND3 SLC30A5-209ENST00000621204 3999 ntTSL 5 BASIC14.09□□□□□ -0.15
NPIPA1Q9UND3 ATP6V0A1-204ENST00000537728 2774 ntTSL 2 BASIC14.09□□□□□ -0.15
NPIPA1Q9UND3 TCF25-202ENST00000263347 2377 ntTSL 5 BASIC14.09□□□□□ -0.15
NPIPA1Q9UND3 PDE1B-201ENST00000243052 3444 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
NPIPA1Q9UND3 KAT7-210ENST00000509773 1774 ntTSL 2 BASIC14.09□□□□□ -0.15
NPIPA1Q9UND3 FOLH1-201ENST00000256999 2635 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
NPIPA1Q9UND3 ZFYVE28-210ENST00000515169 1590 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
NPIPA1Q9UND3 FBLN7-203ENST00000409450 1394 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
NPIPA1Q9UND3 TRIP10-210ENST00000600428 2249 ntTSL 5 BASIC14.09□□□□□ -0.15
NPIPA1Q9UND3 TFB2M-201ENST00000366514 1848 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.15
NPIPA1Q9UND3 ELMO3-201ENST00000360833 2480 ntAPPRIS ALT2 TSL 2 BASIC14.08□□□□□ -0.15
NPIPA1Q9UND3 GGT6-204ENST00000574154 2482 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.15
NPIPA1Q9UND3 CDK18-201ENST00000360066 3141 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.15
NPIPA1Q9UND3 KCP-203ENST00000610776 5108 ntTSL 5 BASIC14.08□□□□□ -0.15
NPIPA1Q9UND3 AAMP-201ENST00000248450 1886 ntAPPRIS P3 TSL 1 (best) BASIC14.08□□□□□ -0.16
NPIPA1Q9UND3 NKIRAS1-201ENST00000388759 2335 ntAPPRIS P2 TSL 3 BASIC14.08□□□□□ -0.16
Retrieved 100 of 98,524 protein–RNA pairs in 74.1 ms