Protein–RNA interactions for Protein: Q9P0W2

HMG20B, SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily E member 1-related, humanhuman

Predictions only

Length 317 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HMG20BQ9P0W2 CDRT15-202ENST00000431716 655 ntAPPRIS ALT2 TSL 1 (best) BASIC18.48■□□□□ 0.55
HMG20BQ9P0W2 AL731661.1-201ENST00000438217 758 ntTSL 5 BASIC18.48■□□□□ 0.55
HMG20BQ9P0W2 POM121L9P-203ENST00000441984 1285 ntBASIC18.48■□□□□ 0.55
HMG20BQ9P0W2 RPARP-AS1-201ENST00000473970 1297 ntTSL 1 (best) BASIC18.48■□□□□ 0.55
HMG20BQ9P0W2 LINC02279-201ENST00000553435 737 ntTSL 5 BASIC18.48■□□□□ 0.55
HMG20BQ9P0W2 DIO3OS-203ENST00000554441 1068 ntTSL 1 (best) BASIC18.48■□□□□ 0.55
HMG20BQ9P0W2 HNRNPA1P48-202ENST00000565308 961 ntBASIC18.48■□□□□ 0.55
HMG20BQ9P0W2 AC120498.3-201ENST00000568884 542 ntTSL 4 BASIC18.48■□□□□ 0.55
HMG20BQ9P0W2 AC003070.2-201ENST00000589730 386 ntTSL 3 BASIC18.48■□□□□ 0.55
HMG20BQ9P0W2 SERF2-217ENST00000630046 862 ntTSL 5 BASIC18.48■□□□□ 0.55
HMG20BQ9P0W2 APBB1-217ENST00000608645 1925 ntTSL 5 BASIC18.48■□□□□ 0.55
HMG20BQ9P0W2 LARP4-219ENST00000614335 1949 ntTSL 5 BASIC18.48■□□□□ 0.55
HMG20BQ9P0W2 PRSS54-201ENST00000219301 1810 ntAPPRIS P1 TSL 5 BASIC18.48■□□□□ 0.55
HMG20BQ9P0W2 MGRN1-206ENST00000586183 1841 ntAPPRIS ALT2 TSL 5 BASIC18.48■□□□□ 0.55
HMG20BQ9P0W2 SRCIN1-215ENST00000621492 4644 ntAPPRIS ALT2 TSL 5 BASIC18.48■□□□□ 0.55
HMG20BQ9P0W2 AL365199.1-201ENST00000421320 1714 ntTSL 2 BASIC18.48■□□□□ 0.55
HMG20BQ9P0W2 MON2-201ENST00000393629 5612 ntTSL 1 (best) BASIC18.48■□□□□ 0.55
HMG20BQ9P0W2 ZNF586-203ENST00000396154 2163 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
HMG20BQ9P0W2 NEO1-201ENST00000261908 7088 ntAPPRIS P3 TSL 1 (best) BASIC18.48■□□□□ 0.55
HMG20BQ9P0W2 TSC1-202ENST00000403810 1507 ntTSL 1 (best) BASIC18.48■□□□□ 0.55
HMG20BQ9P0W2 SULT1C4-201ENST00000272452 1860 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
HMG20BQ9P0W2 TUBB1P2-201ENST00000422712 1306 ntBASIC18.48■□□□□ 0.55
HMG20BQ9P0W2 TUBB1P1-201ENST00000503144 1300 ntBASIC18.48■□□□□ 0.55
HMG20BQ9P0W2 TSPY26P-202ENST00000565928 3884 ntBASIC18.48■□□□□ 0.55
HMG20BQ9P0W2 AC055811.4-201ENST00000624039 1754 ntBASIC18.47■□□□□ 0.55
HMG20BQ9P0W2 MYLK2-201ENST00000375985 2787 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
HMG20BQ9P0W2 GPRIN1-201ENST00000303991 4211 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
HMG20BQ9P0W2 TUBGCP2-203ENST00000368563 4218 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
HMG20BQ9P0W2 CREBBP-201ENST00000262367 10803 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
HMG20BQ9P0W2 CCDC140-201ENST00000295226 1699 ntAPPRIS P2 TSL 1 (best) BASIC18.47■□□□□ 0.55
HMG20BQ9P0W2 MAGEA12-201ENST00000357916 1664 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
HMG20BQ9P0W2 MEOX1-202ENST00000329168 2129 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
HMG20BQ9P0W2 MAP4K5-201ENST00000013125 4354 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
HMG20BQ9P0W2 TPCN1-201ENST00000335509 5274 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
HMG20BQ9P0W2 GDF6-201ENST00000287020 3701 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
HMG20BQ9P0W2 RAB3IP-204ENST00000378815 2386 ntTSL 2 BASIC18.47■□□□□ 0.55
HMG20BQ9P0W2 DPP6-205ENST00000427557 2388 ntTSL 2 BASIC18.47■□□□□ 0.55
HMG20BQ9P0W2 BRF1-205ENST00000440513 2368 ntTSL 2 BASIC18.47■□□□□ 0.55
HMG20BQ9P0W2 CHTF18-205ENST00000455171 3172 ntAPPRIS ALT2 TSL 2 BASIC18.47■□□□□ 0.55
HMG20BQ9P0W2 NFYC-205ENST00000372654 1455 ntAPPRIS P3 TSL 1 (best) BASIC18.47■□□□□ 0.55
HMG20BQ9P0W2 ZNF767P-201ENST00000463567 3520 ntTSL 2 BASIC18.47■□□□□ 0.55
HMG20BQ9P0W2 CKAP4-201ENST00000378026 3093 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
HMG20BQ9P0W2 GNAL-202ENST00000334049 6535 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
HMG20BQ9P0W2 B9D1-209ENST00000477478 1353 ntTSL 3 BASIC18.47■□□□□ 0.55
HMG20BQ9P0W2 MVB12B-201ENST00000361171 4819 ntAPPRIS P1 TSL 2 BASIC18.47■□□□□ 0.55
HMG20BQ9P0W2 ELAVL3-201ENST00000359227 4729 ntAPPRIS P3 TSL 3 BASIC18.47■□□□□ 0.55
HMG20BQ9P0W2 TPM3P8-201ENST00000330554 643 ntBASIC18.47■□□□□ 0.55
HMG20BQ9P0W2 FAM86MP-201ENST00000340703 885 ntBASIC18.47■□□□□ 0.55
HMG20BQ9P0W2 UBE2T-201ENST00000367274 922 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
HMG20BQ9P0W2 DUSP23-202ENST00000368108 694 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
HMG20BQ9P0W2 C15orf48-202ENST00000396650 732 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
HMG20BQ9P0W2 AC078785.1-201ENST00000496389 734 ntTSL 3 BASIC18.47■□□□□ 0.55
HMG20BQ9P0W2 AC008808.1-201ENST00000508923 432 ntTSL 3 BASIC18.47■□□□□ 0.55
HMG20BQ9P0W2 AC023310.1-201ENST00000554836 735 ntBASIC18.47■□□□□ 0.55
HMG20BQ9P0W2 DPF3-210ENST00000556509 1138 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
HMG20BQ9P0W2 DYNLRB2-205ENST00000568035 409 ntTSL 5 BASIC18.47■□□□□ 0.55
HMG20BQ9P0W2 AL160412.1-202ENST00000616819 663 ntTSL 4 BASIC18.47■□□□□ 0.55
HMG20BQ9P0W2 MYOZ1-201ENST00000359322 1541 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
HMG20BQ9P0W2 GFRA2-204ENST00000518077 1503 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
HMG20BQ9P0W2 SFTA3-204ENST00000518529 1531 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
HMG20BQ9P0W2 ANKFY1-202ENST00000570535 6458 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
HMG20BQ9P0W2 MLF1-216ENST00000618075 2116 ntTSL 5 BASIC18.47■□□□□ 0.55
HMG20BQ9P0W2 RGPD8-201ENST00000302558 5576 ntAPPRIS P2 TSL 1 (best) BASIC18.47■□□□□ 0.55
HMG20BQ9P0W2 PPP1R26-206ENST00000605660 4502 ntAPPRIS P1 BASIC18.47■□□□□ 0.55
HMG20BQ9P0W2 CNKSR1-201ENST00000361530 2625 ntAPPRIS P3 TSL 1 (best) BASIC18.47■□□□□ 0.55
HMG20BQ9P0W2 TRPC4AP-201ENST00000252015 3226 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
HMG20BQ9P0W2 POR-201ENST00000394893 2532 ntTSL 5 BASIC18.47■□□□□ 0.55
HMG20BQ9P0W2 ZBED1P1-201ENST00000502364 1930 ntBASIC18.47■□□□□ 0.55
HMG20BQ9P0W2 TNFRSF14-AS1-202ENST00000432521 3608 ntTSL 2 BASIC18.47■□□□□ 0.55
HMG20BQ9P0W2 ZNF286A-218ENST00000583566 1806 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
HMG20BQ9P0W2 KAT5-202ENST00000352980 2059 ntTSL 1 (best) BASIC18.46■□□□□ 0.55
HMG20BQ9P0W2 MCFD2-201ENST00000319466 4182 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
HMG20BQ9P0W2 ZDHHC4-203ENST00000396707 1461 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
HMG20BQ9P0W2 SELPLG-201ENST00000228463 1704 ntAPPRIS ALT2 TSL 2 BASIC18.46■□□□□ 0.55
HMG20BQ9P0W2 MAGEA2-204ENST00000611674 1728 ntAPPRIS P1 TSL 2 BASIC18.46■□□□□ 0.55
HMG20BQ9P0W2 LARP6-201ENST00000299213 4469 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
HMG20BQ9P0W2 KYAT1-202ENST00000320665 1623 ntTSL 2 BASIC18.46■□□□□ 0.55
HMG20BQ9P0W2 HCRTR1-202ENST00000373706 1642 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
HMG20BQ9P0W2 MPP1-204ENST00000393531 1389 ntTSL 1 (best) BASIC18.46■□□□□ 0.55
HMG20BQ9P0W2 PABPC4-202ENST00000372857 3048 ntTSL 1 (best) BASIC18.46■□□□□ 0.55
HMG20BQ9P0W2 SLC36A1-207ENST00000520701 2005 ntAPPRIS P1 TSL 5 BASIC18.46■□□□□ 0.55
HMG20BQ9P0W2 ATG10-203ENST00000458350 1795 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
HMG20BQ9P0W2 COL17A1-202ENST00000369733 5488 ntAPPRIS ALT2 TSL 5 BASIC18.46■□□□□ 0.55
HMG20BQ9P0W2 NCOA6-206ENST00000612493 4082 ntAPPRIS ALT2 TSL 5 BASIC18.46■□□□□ 0.55
HMG20BQ9P0W2 DBI-203ENST00000393103 599 ntAPPRIS P4 TSL 1 (best) BASIC18.46■□□□□ 0.55
HMG20BQ9P0W2 MB-205ENST00000406324 582 ntAPPRIS P1 TSL 2 BASIC18.46■□□□□ 0.55
HMG20BQ9P0W2 AL035588.1-201ENST00000438967 408 ntTSL 3 BASIC18.46■□□□□ 0.55
HMG20BQ9P0W2 AC245100.3-201ENST00000441281 285 ntBASIC18.46■□□□□ 0.55
HMG20BQ9P0W2 STARD4-205ENST00000505803 803 ntAPPRIS P1 TSL 2 BASIC18.46■□□□□ 0.55
HMG20BQ9P0W2 STARD4-207ENST00000509887 1186 ntTSL 1 (best) BASIC18.46■□□□□ 0.55
HMG20BQ9P0W2 SNHG9-201ENST00000531523 275 ntTSL 1 (best) BASIC18.46■□□□□ 0.55
HMG20BQ9P0W2 AL122035.1-201ENST00000556640 550 ntTSL 2 BASIC18.46■□□□□ 0.55
HMG20BQ9P0W2 AC010328.2-201ENST00000597698 1111 ntBASIC18.46■□□□□ 0.55
HMG20BQ9P0W2 PER1-201ENST00000317276 4707 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
HMG20BQ9P0W2 INPP5K-204ENST00000421807 2988 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
HMG20BQ9P0W2 FOXRED1-213ENST00000532125 1825 ntAPPRIS ALT2 TSL 2 BASIC18.46■□□□□ 0.55
HMG20BQ9P0W2 AQP6-204ENST00000615425 2245 ntAPPRIS P1 TSL 5 BASIC18.46■□□□□ 0.55
HMG20BQ9P0W2 YY1AP1-201ENST00000295566 2626 ntAPPRIS P4 TSL 2 BASIC18.46■□□□□ 0.55
HMG20BQ9P0W2 SLC5A10-202ENST00000395643 1982 ntTSL 1 (best) BASIC18.46■□□□□ 0.55
HMG20BQ9P0W2 AP000845.1-201ENST00000581677 2131 ntBASIC18.46■□□□□ 0.55
Retrieved 100 of 98,524 protein–RNA pairs in 41.1 ms