Protein–RNA interactions for Protein: Q9NWW5

CLN6, Ceroid-lipofuscinosis neuronal protein 6, humanhuman

Predictions only

Length 311 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLN6Q9NWW5 FBXL4-201ENST00000229971 2810 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
CLN6Q9NWW5 ADPRHL1-204ENST00000612156 9759 ntTSL 5 BASIC13.97□□□□□ -0.17
CLN6Q9NWW5 ABCG1-203ENST00000361802 3034 ntAPPRIS P3 TSL 1 (best) BASIC13.97□□□□□ -0.17
CLN6Q9NWW5 FES-203ENST00000394302 2133 ntTSL 5 BASIC13.97□□□□□ -0.17
CLN6Q9NWW5 TCAIM-201ENST00000342649 3687 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
CLN6Q9NWW5 MKL1-202ENST00000396617 4505 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
CLN6Q9NWW5 ABCG1-205ENST00000398449 2998 ntAPPRIS ALT1 TSL 1 (best) BASIC13.97□□□□□ -0.17
CLN6Q9NWW5 TMEM132C-201ENST00000435159 4947 ntAPPRIS P1 TSL 5 BASIC13.97□□□□□ -0.17
CLN6Q9NWW5 MCM9-202ENST00000316316 5101 ntAPPRIS P1 TSL 5 BASIC13.97□□□□□ -0.17
CLN6Q9NWW5 LRRFIP1-204ENST00000392000 3365 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
CLN6Q9NWW5 GABPB1-202ENST00000359031 1633 ntTSL 5 BASIC13.97□□□□□ -0.17
CLN6Q9NWW5 AC005252.3-201ENST00000623855 2258 ntBASIC13.97□□□□□ -0.17
CLN6Q9NWW5 AL356275.1-201ENST00000638446 7440 ntTSL 5 BASIC13.97□□□□□ -0.17
CLN6Q9NWW5 E2F6-201ENST00000307236 3317 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
CLN6Q9NWW5 TSPAN18-207ENST00000520358 3316 ntAPPRIS P1 TSL 5 BASIC13.97□□□□□ -0.17
CLN6Q9NWW5 PIANP-202ENST00000534837 2695 ntAPPRIS ALT2 TSL 1 (best) BASIC13.97□□□□□ -0.17
CLN6Q9NWW5 MYLK-203ENST00000359169 7585 ntAPPRIS P3 TSL 5 BASIC13.97□□□□□ -0.17
CLN6Q9NWW5 LINC01138-206ENST00000622328 2212 ntTSL 2 BASIC13.96□□□□□ -0.17
CLN6Q9NWW5 AC007787.1-201ENST00000588095 1583 ntBASIC13.96□□□□□ -0.17
CLN6Q9NWW5 ATE1-201ENST00000224652 4930 ntAPPRIS P5 TSL 1 (best) BASIC13.96□□□□□ -0.17
CLN6Q9NWW5 PAPSS2-202ENST00000456849 3856 ntTSL 1 (best) BASIC13.96□□□□□ -0.17
CLN6Q9NWW5 CRCP-203ENST00000395326 3009 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
CLN6Q9NWW5 OSGIN1-201ENST00000343939 2391 ntTSL 2 BASIC13.96□□□□□ -0.17
CLN6Q9NWW5 CILP2-202ENST00000586018 4234 ntAPPRIS ALT1 TSL 2 BASIC13.96□□□□□ -0.17
CLN6Q9NWW5 FGD6-203ENST00000546711 4568 ntTSL 5 BASIC13.96□□□□□ -0.17
CLN6Q9NWW5 TEX28-203ENST00000617225 1525 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
CLN6Q9NWW5 MUTYH-210ENST00000450313 1929 ntTSL 5 BASIC13.96□□□□□ -0.17
CLN6Q9NWW5 TAF6-205ENST00000437822 2318 ntTSL 2 BASIC13.96□□□□□ -0.17
CLN6Q9NWW5 ANKRD35-201ENST00000355594 3342 ntAPPRIS P1 TSL 2 BASIC13.96□□□□□ -0.17
CLN6Q9NWW5 GCC1-201ENST00000321407 4149 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
CLN6Q9NWW5 CPSF1-212ENST00000616140 4494 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
CLN6Q9NWW5 TFR2-201ENST00000223051 2888 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
CLN6Q9NWW5 INTS11-204ENST00000421495 1868 ntTSL 2 BASIC13.96□□□□□ -0.17
CLN6Q9NWW5 MRPL55-201ENST00000295008 632 ntAPPRIS P1 TSL 2 BASIC13.96□□□□□ -0.17
CLN6Q9NWW5 PIGU-202ENST00000374820 1248 ntAPPRIS ALT2 TSL 1 (best) BASIC13.96□□□□□ -0.17
CLN6Q9NWW5 NCBP2-203ENST00000422610 676 ntTSL 2 BASIC13.96□□□□□ -0.17
CLN6Q9NWW5 AL121672.1-201ENST00000439423 1181 ntTSL 1 (best) BASIC13.96□□□□□ -0.17
CLN6Q9NWW5 AL591424.1-201ENST00000442569 1213 ntBASIC13.96□□□□□ -0.17
CLN6Q9NWW5 AL391335.1-201ENST00000504583 535 ntTSL 4 BASIC13.96□□□□□ -0.17
CLN6Q9NWW5 PP7080-204ENST00000510714 601 ntTSL 3 BASIC13.96□□□□□ -0.17
CLN6Q9NWW5 AC021066.1-201ENST00000549788 647 ntTSL 3 BASIC13.96□□□□□ -0.17
CLN6Q9NWW5 BRF1-219ENST00000551787 824 ntTSL 1 (best) BASIC13.96□□□□□ -0.17
CLN6Q9NWW5 HEXA-210ENST00000567213 1000 ntTSL 3 BASIC13.96□□□□□ -0.17
CLN6Q9NWW5 AC007216.4-201ENST00000574364 562 ntTSL 4 BASIC13.96□□□□□ -0.17
CLN6Q9NWW5 POLM-202ENST00000335195 2444 ntTSL 1 (best) BASIC13.96□□□□□ -0.17
CLN6Q9NWW5 BIRC5-203ENST00000374948 2446 ntTSL 1 (best) BASIC13.96□□□□□ -0.17
CLN6Q9NWW5 MARK3-205ENST00000429436 3371 ntAPPRIS ALT1 TSL 1 (best) BASIC13.96□□□□□ -0.17
CLN6Q9NWW5 POLG-201ENST00000268124 4500 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
CLN6Q9NWW5 DTX3-202ENST00000548198 3199 ntAPPRIS P3 TSL 2 BASIC13.96□□□□□ -0.17
CLN6Q9NWW5 ZNF596-201ENST00000308811 2783 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
CLN6Q9NWW5 SMTN-202ENST00000347557 3130 ntTSL 1 (best) BASIC13.96□□□□□ -0.18
CLN6Q9NWW5 ANKRD44-203ENST00000409153 2724 ntTSL 2 BASIC13.96□□□□□ -0.18
CLN6Q9NWW5 MAGIX-208ENST00000616266 3295 ntAPPRIS ALT2 TSL 5 BASIC13.96□□□□□ -0.18
CLN6Q9NWW5 MAGED4B-202ENST00000360134 2510 ntAPPRIS ALT2 TSL 1 (best) BASIC13.96□□□□□ -0.18
CLN6Q9NWW5 TUBG2-201ENST00000251412 1761 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.18
CLN6Q9NWW5 LINC00841-201ENST00000451929 2126 ntTSL 2 BASIC13.96□□□□□ -0.18
CLN6Q9NWW5 ABCA2-201ENST00000265662 8154 ntAPPRIS ALT2 TSL 5 BASIC13.96□□□□□ -0.18
CLN6Q9NWW5 GLMP-213ENST00000612353 1365 ntAPPRIS ALT2 TSL 5 BASIC13.96□□□□□ -0.18
CLN6Q9NWW5 GLMP-215ENST00000622703 1364 ntAPPRIS ALT2 TSL 2 BASIC13.96□□□□□ -0.18
CLN6Q9NWW5 GABPA-202ENST00000400075 4814 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.18
CLN6Q9NWW5 C17orf53-201ENST00000245382 2272 ntAPPRIS ALT2 TSL 1 (best) BASIC13.95□□□□□ -0.18
CLN6Q9NWW5 ZSCAN32-205ENST00000439568 1746 ntTSL 2 BASIC13.95□□□□□ -0.18
CLN6Q9NWW5 TFCP2-201ENST00000257915 3546 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
CLN6Q9NWW5 MPHOSPH10-205ENST00000498451 2068 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
CLN6Q9NWW5 IDH3B-201ENST00000380843 1545 ntAPPRIS P4 TSL 1 (best) BASIC13.95□□□□□ -0.18
CLN6Q9NWW5 NDUFV1-202ENST00000415352 1512 ntAPPRIS ALT1 TSL 2 BASIC13.95□□□□□ -0.18
CLN6Q9NWW5 OSBPL5-202ENST00000348039 2798 ntTSL 2 BASIC13.95□□□□□ -0.18
CLN6Q9NWW5 SPOCK3-202ENST00000357545 2936 ntAPPRIS P3 TSL 1 (best) BASIC13.95□□□□□ -0.18
CLN6Q9NWW5 SPOCK3-210ENST00000506886 2947 ntAPPRIS ALT2 TSL 5 BASIC13.95□□□□□ -0.18
CLN6Q9NWW5 EFR3B-202ENST00000401432 5162 ntTSL 2 BASIC13.95□□□□□ -0.18
CLN6Q9NWW5 FHOD3-201ENST00000257209 4967 ntAPPRIS P3 TSL 1 (best) BASIC13.95□□□□□ -0.18
CLN6Q9NWW5 PNPLA6-201ENST00000221249 4617 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
CLN6Q9NWW5 ARHGAP45-201ENST00000313093 4273 ntAPPRIS P3 TSL 1 (best) BASIC13.95□□□□□ -0.18
CLN6Q9NWW5 LLGL1-201ENST00000316843 4260 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
CLN6Q9NWW5 PHF14-201ENST00000403050 4276 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
CLN6Q9NWW5 PFDN4-201ENST00000371419 1462 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
CLN6Q9NWW5 MAPT-206ENST00000415613 2331 ntAPPRIS ALT2 TSL 5 BASIC13.95□□□□□ -0.18
CLN6Q9NWW5 HOGA1-203ENST00000370647 1999 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
CLN6Q9NWW5 AC010327.3-201ENST00000591665 1643 ntTSL 2 BASIC13.95□□□□□ -0.18
CLN6Q9NWW5 LTC4S-201ENST00000292596 666 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
CLN6Q9NWW5 KRTCAP2-201ENST00000295682 552 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
CLN6Q9NWW5 CRYBA2-201ENST00000295728 893 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
CLN6Q9NWW5 HINT1-201ENST00000304043 1081 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
CLN6Q9NWW5 WASHC2C-201ENST00000336378 4669 ntAPPRIS ALT2 TSL 5 BASIC13.95□□□□□ -0.18
CLN6Q9NWW5 STOML1-203ENST00000359750 984 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
CLN6Q9NWW5 AMACR-204ENST00000382085 1195 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
CLN6Q9NWW5 GPR162-202ENST00000382315 1150 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
CLN6Q9NWW5 AC106791.1-202ENST00000508281 1148 ntTSL 2 BASIC13.95□□□□□ -0.18
CLN6Q9NWW5 AC007406.4-201ENST00000539568 765 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
CLN6Q9NWW5 KRT126P-201ENST00000549467 1181 ntBASIC13.95□□□□□ -0.18
CLN6Q9NWW5 RNF34-208ENST00000555076 593 ntTSL 3 BASIC13.95□□□□□ -0.18
CLN6Q9NWW5 KRT8P23-201ENST00000560090 1207 ntBASIC13.95□□□□□ -0.18
CLN6Q9NWW5 AC243562.1-201ENST00000560672 389 ntBASIC13.95□□□□□ -0.18
CLN6Q9NWW5 ADAM10-217ENST00000561288 583 ntTSL 3 BASIC13.95□□□□□ -0.18
CLN6Q9NWW5 TMEM101-204ENST00000587529 965 ntTSL 2 BASIC13.95□□□□□ -0.18
CLN6Q9NWW5 HNRNPDL-206ENST00000602300 1291 ntAPPRIS ALT2 TSL 1 (best) BASIC13.95□□□□□ -0.18
CLN6Q9NWW5 FAM219A-209ENST00000445726 3644 ntAPPRIS ALT1 TSL 2 BASIC13.95□□□□□ -0.18
CLN6Q9NWW5 KIAA1211L-201ENST00000397899 3907 ntAPPRIS P2 TSL 1 (best) BASIC13.95□□□□□ -0.18
CLN6Q9NWW5 AC079781.5-202ENST00000641784 3743 ntBASIC13.95□□□□□ -0.18
CLN6Q9NWW5 FGR-203ENST00000374005 2729 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Retrieved 100 of 98,524 protein–RNA pairs in 67.1 ms