Protein–RNA interactions for Protein: Q9NWM3

CUEDC1, CUE domain-containing protein 1, humanhuman

Predicted RBP Predictions only

Length 386 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CUEDC1Q9NWM3 FOXI2-201ENST00000388920 3217 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
CUEDC1Q9NWM3 RASGEF1C-206ENST00000522500 2055 ntTSL 2 BASIC14.78□□□□□ -0.04
CUEDC1Q9NWM3 ALDH3B2-201ENST00000349015 2649 ntAPPRIS P1 TSL 5 BASIC14.78□□□□□ -0.04
CUEDC1Q9NWM3 GHRLOS-201ENST00000439539 1708 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
CUEDC1Q9NWM3 THEMIS2-203ENST00000373925 1650 ntTSL 1 (best) BASIC14.77□□□□□ -0.04
CUEDC1Q9NWM3 ARHGEF6-202ENST00000370620 4764 ntTSL 2 BASIC14.77□□□□□ -0.04
CUEDC1Q9NWM3 SLC26A10-201ENST00000320442 2389 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
CUEDC1Q9NWM3 P2RY4-201ENST00000374519 1595 ntAPPRIS P1 BASIC14.77□□□□□ -0.04
CUEDC1Q9NWM3 TCEAL4-209ENST00000472745 1571 ntAPPRIS P3 TSL 5 BASIC14.77□□□□□ -0.04
CUEDC1Q9NWM3 SLC8B1-201ENST00000202831 2975 ntAPPRIS P1 TSL 5 BASIC14.77□□□□□ -0.04
CUEDC1Q9NWM3 ZNF398-205ENST00000491174 2232 ntTSL 2 BASIC14.77□□□□□ -0.04
CUEDC1Q9NWM3 TRAPPC11-202ENST00000357207 4435 ntTSL 1 (best) BASIC14.77□□□□□ -0.04
CUEDC1Q9NWM3 KLK6-203ENST00000391808 1478 ntTSL 1 (best) BASIC14.77□□□□□ -0.04
CUEDC1Q9NWM3 INPP5K-201ENST00000320345 2880 ntTSL 5 BASIC14.77□□□□□ -0.04
CUEDC1Q9NWM3 REXO1L2P-201ENST00000425429 2069 ntBASIC14.77□□□□□ -0.04
CUEDC1Q9NWM3 AGAP7P-201ENST00000582299 2062 ntBASIC14.77□□□□□ -0.04
CUEDC1Q9NWM3 AGAP14-201ENST00000624701 2060 ntBASIC14.77□□□□□ -0.04
CUEDC1Q9NWM3 WSB2-202ENST00000441406 1353 ntTSL 2 BASIC14.77□□□□□ -0.04
CUEDC1Q9NWM3 PIP5K1C-202ENST00000537021 3326 ntAPPRIS ALT2 TSL 1 (best) BASIC14.77□□□□□ -0.04
CUEDC1Q9NWM3 HSPH1-201ENST00000320027 5191 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
CUEDC1Q9NWM3 CRLS1-203ENST00000452938 3859 ntTSL 1 (best) BASIC14.77□□□□□ -0.04
CUEDC1Q9NWM3 PLAGL1-206ENST00000416623 3237 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
CUEDC1Q9NWM3 SIDT1-202ENST00000393830 2572 ntTSL 1 (best) BASIC14.77□□□□□ -0.04
CUEDC1Q9NWM3 TPRX1-201ENST00000322175 1924 ntTSL 1 (best) BASIC14.77□□□□□ -0.04
CUEDC1Q9NWM3 LGALS2-201ENST00000215886 591 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
CUEDC1Q9NWM3 CGB5-201ENST00000301408 841 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
CUEDC1Q9NWM3 TNFRSF12A-202ENST00000341627 881 ntTSL 1 (best) BASIC14.77□□□□□ -0.05
CUEDC1Q9NWM3 LDLRAD1-201ENST00000371360 785 ntAPPRIS P3 TSL 1 (best) BASIC14.77□□□□□ -0.05
CUEDC1Q9NWM3 MPV17-203ENST00000380044 1005 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
CUEDC1Q9NWM3 IGHV3-16-201ENST00000390604 425 ntAPPRIS P1 BASIC14.77□□□□□ -0.05
CUEDC1Q9NWM3 SZT2-AS1-201ENST00000396885 699 ntTSL 3 BASIC14.77□□□□□ -0.05
CUEDC1Q9NWM3 AL450998.2-201ENST00000418525 639 ntTSL 3 BASIC14.77□□□□□ -0.05
CUEDC1Q9NWM3 ZNF589-204ENST00000440261 917 ntTSL 2 BASIC14.77□□□□□ -0.05
CUEDC1Q9NWM3 AC234783.1-201ENST00000441761 496 ntBASIC14.77□□□□□ -0.05
CUEDC1Q9NWM3 RHOXF1P1-201ENST00000454625 772 ntTSL 3 BASIC14.77□□□□□ -0.05
CUEDC1Q9NWM3 AC078785.1-203ENST00000467342 573 ntTSL 4 BASIC14.77□□□□□ -0.05
CUEDC1Q9NWM3 ROPN1-207ENST00000484329 566 ntTSL 3 BASIC14.77□□□□□ -0.05
CUEDC1Q9NWM3 CLUHP6-201ENST00000580789 941 ntBASIC14.77□□□□□ -0.05
CUEDC1Q9NWM3 TUBB6-203ENST00000586653 788 ntTSL 2 BASIC14.77□□□□□ -0.05
CUEDC1Q9NWM3 AC005253.2-201ENST00000593791 432 ntTSL 3 BASIC14.77□□□□□ -0.05
CUEDC1Q9NWM3 TPTE2P2-205ENST00000606711 505 ntTSL 5 BASIC14.77□□□□□ -0.05
CUEDC1Q9NWM3 PFAS-212ENST00000625942 396 ntTSL 5 BASIC14.77□□□□□ -0.05
CUEDC1Q9NWM3 SNCAIP-207ENST00000504884 1885 ntTSL 1 (best) BASIC14.77□□□□□ -0.05
CUEDC1Q9NWM3 FOXRED2-204ENST00000397224 4967 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
CUEDC1Q9NWM3 DUSP22-202ENST00000419235 3098 ntAPPRIS P1 TSL 2 BASIC14.77□□□□□ -0.05
CUEDC1Q9NWM3 TGFB1I1-202ENST00000394858 1803 ntAPPRIS P3 TSL 1 (best) BASIC14.77□□□□□ -0.05
CUEDC1Q9NWM3 AP4M1-205ENST00000422582 1814 ntTSL 2 BASIC14.77□□□□□ -0.05
CUEDC1Q9NWM3 MGRN1-206ENST00000586183 1841 ntAPPRIS ALT2 TSL 5 BASIC14.77□□□□□ -0.05
CUEDC1Q9NWM3 PRPF3-201ENST00000324862 2433 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
CUEDC1Q9NWM3 P3H1-201ENST00000236040 2993 ntAPPRIS ALT2 TSL 2 BASIC14.77□□□□□ -0.05
CUEDC1Q9NWM3 FEM1B-201ENST00000306917 7122 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
CUEDC1Q9NWM3 USE1-206ENST00000595101 1776 ntTSL 2 BASIC14.77□□□□□ -0.05
CUEDC1Q9NWM3 NR6A1-205ENST00000487099 7031 ntAPPRIS P3 TSL 1 (best) BASIC14.77□□□□□ -0.05
CUEDC1Q9NWM3 NUP88-207ENST00000573584 2916 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
CUEDC1Q9NWM3 TBC1D25-201ENST00000376771 4042 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
CUEDC1Q9NWM3 MPDU1-201ENST00000250124 1601 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
CUEDC1Q9NWM3 MRPL11-201ENST00000310999 1605 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
CUEDC1Q9NWM3 AL158070.2-201ENST00000623713 1621 ntBASIC14.77□□□□□ -0.05
CUEDC1Q9NWM3 EIF2S2-201ENST00000374980 2656 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
CUEDC1Q9NWM3 VGLL4-202ENST00000413604 1554 ntTSL 2 BASIC14.77□□□□□ -0.05
CUEDC1Q9NWM3 ISCA2-204ENST00000556816 2626 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
CUEDC1Q9NWM3 TP73-204ENST00000378280 2062 ntTSL 1 (best) BASIC14.77□□□□□ -0.05
CUEDC1Q9NWM3 HNF1B-201ENST00000613727 1546 ntTSL 1 (best) BASIC14.76□□□□□ -0.05
CUEDC1Q9NWM3 KATNA1-203ENST00000367411 1984 ntAPPRIS P1 TSL 2 BASIC14.76□□□□□ -0.05
CUEDC1Q9NWM3 AL157414.3-201ENST00000624276 1954 ntBASIC14.76□□□□□ -0.05
CUEDC1Q9NWM3 ZSWIM8-AS1-201ENST00000456638 1460 ntTSL 1 (best) BASIC14.76□□□□□ -0.05
CUEDC1Q9NWM3 AC020659.1-201ENST00000309874 2900 ntTSL 2 BASIC14.76□□□□□ -0.05
CUEDC1Q9NWM3 HNRNPUL1-220ENST00000602130 2932 ntAPPRIS ALT2 TSL 1 (best) BASIC14.76□□□□□ -0.05
CUEDC1Q9NWM3 DYSF-201ENST00000258104 6796 ntAPPRIS P3 TSL 1 (best) BASIC14.76□□□□□ -0.05
CUEDC1Q9NWM3 DYSF-204ENST00000409582 6790 ntAPPRIS ALT2 TSL 1 (best) BASIC14.76□□□□□ -0.05
CUEDC1Q9NWM3 DYSF-210ENST00000413539 6769 ntAPPRIS ALT2 TSL 1 (best) BASIC14.76□□□□□ -0.05
CUEDC1Q9NWM3 RPS19-206ENST00000598742 2359 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
CUEDC1Q9NWM3 PXN-201ENST00000228307 3785 ntAPPRIS P4 TSL 1 (best) BASIC14.76□□□□□ -0.05
CUEDC1Q9NWM3 UPF3B-202ENST00000345865 2335 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
CUEDC1Q9NWM3 ISPD-202ENST00000407010 5524 ntAPPRIS P1 TSL 5 BASIC14.76□□□□□ -0.05
CUEDC1Q9NWM3 B9D1-209ENST00000477478 1353 ntTSL 3 BASIC14.76□□□□□ -0.05
CUEDC1Q9NWM3 JAKMIP1-205ENST00000410077 1835 ntTSL 2 BASIC14.76□□□□□ -0.05
CUEDC1Q9NWM3 LRCH3-202ENST00000414675 2299 ntAPPRIS ALT2 TSL 2 BASIC14.76□□□□□ -0.05
CUEDC1Q9NWM3 GRK5-202ENST00000392870 2654 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
CUEDC1Q9NWM3 ELAC1-201ENST00000269466 2235 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
CUEDC1Q9NWM3 LBHD1-201ENST00000354588 1320 ntAPPRIS P2 TSL 1 (best) BASIC14.76□□□□□ -0.05
CUEDC1Q9NWM3 AC006504.5-203ENST00000590628 1335 ntTSL 1 (best) BASIC14.76□□□□□ -0.05
CUEDC1Q9NWM3 MTA2-201ENST00000278823 3058 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
CUEDC1Q9NWM3 SLC25A37-206ENST00000519973 4823 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
CUEDC1Q9NWM3 CNKSR1-201ENST00000361530 2625 ntAPPRIS P3 TSL 1 (best) BASIC14.76□□□□□ -0.05
CUEDC1Q9NWM3 KCNJ18-201ENST00000567955 2196 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
CUEDC1Q9NWM3 LINC00528-201ENST00000600723 2160 ntBASIC14.76□□□□□ -0.05
CUEDC1Q9NWM3 ZNF138-201ENST00000307355 1141 ntAPPRIS ALT2 TSL 4 BASIC14.76□□□□□ -0.05
CUEDC1Q9NWM3 MEOX1-202ENST00000329168 2129 ntTSL 1 (best) BASIC14.76□□□□□ -0.05
CUEDC1Q9NWM3 PPDPF-201ENST00000370177 627 ntTSL 2 BASIC14.76□□□□□ -0.05
CUEDC1Q9NWM3 BEX2-202ENST00000372677 899 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
CUEDC1Q9NWM3 KRTAP10-2-201ENST00000391621 1149 ntAPPRIS P1 BASIC14.76□□□□□ -0.05
CUEDC1Q9NWM3 DSCR3-204ENST00000399001 821 ntTSL 2 BASIC14.76□□□□□ -0.05
CUEDC1Q9NWM3 DHDDS-206ENST00000427245 868 ntTSL 5 BASIC14.76□□□□□ -0.05
CUEDC1Q9NWM3 AL162726.2-201ENST00000438986 1017 ntBASIC14.76□□□□□ -0.05
CUEDC1Q9NWM3 TTTY23B-201ENST00000442790 549 ntBASIC14.76□□□□□ -0.05
CUEDC1Q9NWM3 LINC01585-201ENST00000500496 1295 ntTSL 1 (best) BASIC14.76□□□□□ -0.05
CUEDC1Q9NWM3 SERF1A-205ENST00000507348 663 ntTSL 2 BASIC14.76□□□□□ -0.05
CUEDC1Q9NWM3 AC012531.3-201ENST00000513209 777 ntAPPRIS P1 TSL 3 BASIC14.76□□□□□ -0.05
CUEDC1Q9NWM3 PLEKHA7-214ENST00000532079 565 ntTSL 5 BASIC14.76□□□□□ -0.05
Retrieved 100 of 98,524 protein–RNA pairs in 52.1 ms