Protein–RNA interactions for Protein: Q9HC52

CBX8, Chromobox protein homolog 8, humanhuman

Predictions only

Length 389 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CBX8Q9HC52 TMEM52-201ENST00000310991 929 ntAPPRIS P2 TSL 1 (best) BASIC17.03■□□□□ 0.32
CBX8Q9HC52 LRCOL1-201ENST00000376608 778 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
CBX8Q9HC52 AKIP1-204ENST00000396648 1084 ntAPPRIS ALT2 TSL 2 BASIC17.03■□□□□ 0.32
CBX8Q9HC52 AL590627.1-203ENST00000421194 1026 ntBASIC17.03■□□□□ 0.32
CBX8Q9HC52 LINC01237-203ENST00000430555 843 ntTSL 4 BASIC17.03■□□□□ 0.32
CBX8Q9HC52 AC092691.1-201ENST00000484092 554 ntTSL 4 BASIC17.03■□□□□ 0.32
CBX8Q9HC52 CNOT8-210ENST00000519404 945 ntTSL 2 BASIC17.03■□□□□ 0.32
CBX8Q9HC52 CNOT8-214ENST00000520671 923 ntTSL 2 BASIC17.03■□□□□ 0.32
CBX8Q9HC52 CNOT8-218ENST00000521583 1151 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
CBX8Q9HC52 C12orf76-202ENST00000546627 461 ntTSL 4 BASIC17.03■□□□□ 0.32
CBX8Q9HC52 PIN1-206ENST00000587625 878 ntTSL 2 BASIC17.03■□□□□ 0.32
CBX8Q9HC52 TEX264-216ENST00000614067 1174 ntAPPRIS ALT2 TSL 3 BASIC17.03■□□□□ 0.32
CBX8Q9HC52 PSMB6-205ENST00000614486 871 ntTSL 2 BASIC17.03■□□□□ 0.32
CBX8Q9HC52 CLIP2-203ENST00000395060 3141 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
CBX8Q9HC52 ZNF664-202ENST00000392404 4262 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
CBX8Q9HC52 MICB-201ENST00000252229 2446 ntAPPRIS P3 TSL 1 (best) BASIC17.03■□□□□ 0.32
CBX8Q9HC52 PTPRN-201ENST00000295718 3784 ntAPPRIS P3 TSL 1 (best) BASIC17.03■□□□□ 0.32
CBX8Q9HC52 FHL2-201ENST00000322142 1462 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
CBX8Q9HC52 RLIM-202ENST00000349225 3478 ntAPPRIS P1 TSL 2 BASIC17.03■□□□□ 0.32
CBX8Q9HC52 RHNO1-202ENST00000461997 1655 ntAPPRIS ALT2 TSL 2 BASIC17.03■□□□□ 0.32
CBX8Q9HC52 LINC00116-201ENST00000414416 2051 ntAPPRIS P5 TSL 1 (best) BASIC17.03■□□□□ 0.32
CBX8Q9HC52 SCYL1-205ENST00000524944 2715 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
CBX8Q9HC52 UPB1-201ENST00000326010 2290 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
CBX8Q9HC52 SRPX-206ENST00000544439 1842 ntAPPRIS ALT2 TSL 2 BASIC17.03■□□□□ 0.32
CBX8Q9HC52 STOML1-206ENST00000561656 1833 ntTSL 3 BASIC17.03■□□□□ 0.32
CBX8Q9HC52 VRK3-207ENST00000594092 1831 ntAPPRIS ALT2 TSL 1 (best) BASIC17.03■□□□□ 0.32
CBX8Q9HC52 CCP110-201ENST00000381396 5446 ntAPPRIS ALT1 TSL 1 (best) BASIC17.03■□□□□ 0.32
CBX8Q9HC52 RASGEF1A-202ENST00000374459 3264 ntAPPRIS ALT2 TSL 2 BASIC17.02■□□□□ 0.32
CBX8Q9HC52 TCEAL4-209ENST00000472745 1571 ntAPPRIS P3 TSL 5 BASIC17.02■□□□□ 0.32
CBX8Q9HC52 AL157414.3-201ENST00000624276 1954 ntBASIC17.02■□□□□ 0.32
CBX8Q9HC52 AC016397.2-201ENST00000624848 1985 ntBASIC17.02■□□□□ 0.32
CBX8Q9HC52 TMED5-202ENST00000370282 6104 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
CBX8Q9HC52 FLOT2-210ENST00000585169 2585 ntAPPRIS ALT1 TSL 5 BASIC17.02■□□□□ 0.32
CBX8Q9HC52 INF2-209ENST00000617571 2956 ntTSL 1 (best) BASIC17.02■□□□□ 0.32
CBX8Q9HC52 TYK2-210ENST00000529370 3176 ntTSL 2 BASIC17.02■□□□□ 0.32
CBX8Q9HC52 GNB2-202ENST00000393924 1524 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
CBX8Q9HC52 GHRLOS-201ENST00000439539 1708 ntTSL 1 (best) BASIC17.02■□□□□ 0.32
CBX8Q9HC52 KCNJ11-204ENST00000528731 2146 ntTSL 1 (best) BASIC17.02■□□□□ 0.32
CBX8Q9HC52 NFE2L2-202ENST00000397063 2651 ntTSL 1 (best) BASIC17.02■□□□□ 0.32
CBX8Q9HC52 RAP1GAP-211ENST00000495204 2489 ntAPPRIS ALT2 TSL 1 (best) BASIC17.02■□□□□ 0.32
CBX8Q9HC52 SLC43A2-202ENST00000412517 1658 ntTSL 2 BASIC17.02■□□□□ 0.32
CBX8Q9HC52 ELOF1-201ENST00000252445 1019 ntAPPRIS P1 TSL 2 BASIC17.02■□□□□ 0.32
CBX8Q9HC52 CELA2A-201ENST00000359621 919 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
CBX8Q9HC52 ART5-201ENST00000359918 1241 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
CBX8Q9HC52 ASB12-201ENST00000362002 1289 ntAPPRIS P1 TSL 2 BASIC17.02■□□□□ 0.32
CBX8Q9HC52 GRM5-203ENST00000393294 1268 ntTSL 1 (best) BASIC17.02■□□□□ 0.32
CBX8Q9HC52 MTND6P24-201ENST00000440466 518 ntBASIC17.02■□□□□ 0.32
CBX8Q9HC52 RPL13P2-201ENST00000440687 659 ntBASIC17.02■□□□□ 0.32
CBX8Q9HC52 AC007834.1-201ENST00000446473 728 ntTSL 3 BASIC17.02■□□□□ 0.32
CBX8Q9HC52 SEC24B-AS1-203ENST00000505895 800 ntTSL 4 BASIC17.02■□□□□ 0.32
CBX8Q9HC52 GATD1-206ENST00000526325 756 ntTSL 5 BASIC17.02■□□□□ 0.32
CBX8Q9HC52 AC084125.4-201ENST00000580385 338 ntTSL 3 BASIC17.02■□□□□ 0.32
CBX8Q9HC52 FXYD1-208ENST00000589209 428 ntAPPRIS P1 TSL 5 BASIC17.02■□□□□ 0.32
CBX8Q9HC52 AC025048.3-201ENST00000590609 569 ntBASIC17.02■□□□□ 0.32
CBX8Q9HC52 FXYD1-211ENST00000612146 690 ntAPPRIS P1 TSL 3 BASIC17.02■□□□□ 0.32
CBX8Q9HC52 AC005702.4-201ENST00000618393 416 ntBASIC17.02■□□□□ 0.32
CBX8Q9HC52 CKMT1A-208ENST00000626814 1073 ntTSL 5 BASIC17.02■□□□□ 0.32
CBX8Q9HC52 AGO3-201ENST00000246314 3211 ntTSL 1 (best) BASIC17.02■□□□□ 0.32
CBX8Q9HC52 CPD-201ENST00000225719 9394 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
CBX8Q9HC52 SMYD5-202ENST00000389501 2593 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.31
CBX8Q9HC52 CDK20-202ENST00000336654 2176 ntTSL 2 BASIC17.02■□□□□ 0.31
CBX8Q9HC52 GIPC2-201ENST00000370759 3847 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.31
CBX8Q9HC52 GPR68-203ENST00000531499 2859 ntAPPRIS P2 TSL 1 (best) BASIC17.02■□□□□ 0.31
CBX8Q9HC52 BUB3-201ENST00000368858 1361 ntAPPRIS ALT1 TSL 1 (best) BASIC17.02■□□□□ 0.31
CBX8Q9HC52 AC079447.1-201ENST00000424491 1947 ntAPPRIS P1 TSL 2 BASIC17.02■□□□□ 0.31
CBX8Q9HC52 ATL3-203ENST00000538786 1920 ntAPPRIS ALT2 TSL 2 BASIC17.02■□□□□ 0.31
CBX8Q9HC52 AC018665.1-201ENST00000622927 1362 ntBASIC17.02■□□□□ 0.31
CBX8Q9HC52 AL121992.1-201ENST00000428945 2845 ntTSL 2 BASIC17.02■□□□□ 0.31
CBX8Q9HC52 ATP2B3-202ENST00000349466 4280 ntAPPRIS P1 TSL 5 BASIC17.01■□□□□ 0.31
CBX8Q9HC52 TPGS2-202ENST00000383056 1726 ntAPPRIS ALT2 TSL 1 (best) BASIC17.01■□□□□ 0.31
CBX8Q9HC52 SERINC2-206ENST00000536859 2072 ntTSL 2 BASIC17.01■□□□□ 0.31
CBX8Q9HC52 SLC39A9-209ENST00000556605 2065 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
CBX8Q9HC52 PLK2-201ENST00000274289 2960 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
CBX8Q9HC52 GOLGA2-212ENST00000609374 2973 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
CBX8Q9HC52 CSF1-201ENST00000329608 4210 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
CBX8Q9HC52 ADAM12-201ENST00000368676 3313 ntAPPRIS ALT2 TSL 1 (best) BASIC17.01■□□□□ 0.31
CBX8Q9HC52 RAD51D-218ENST00000590016 1528 ntTSL 2 BASIC17.01■□□□□ 0.31
CBX8Q9HC52 TNIK-202ENST00000341852 4727 ntAPPRIS ALT2 TSL 1 (best) BASIC17.01■□□□□ 0.31
CBX8Q9HC52 AL360270.3-201ENST00000609118 1348 ntBASIC17.01■□□□□ 0.31
CBX8Q9HC52 HSD17B4-206ENST00000504811 2740 ntTSL 2 BASIC17.01■□□□□ 0.31
CBX8Q9HC52 KIF1BP-214ENST00000638119 2537 ntTSL 5 BASIC17.01■□□□□ 0.31
CBX8Q9HC52 KIAA1468-202ENST00000398130 6178 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
CBX8Q9HC52 GPSM3-207ENST00000375043 1456 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
CBX8Q9HC52 CYP2AB1P-202ENST00000454440 1456 ntBASIC17.01■□□□□ 0.31
CBX8Q9HC52 MRVI1-204ENST00000527509 2686 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
CBX8Q9HC52 LCE1B-201ENST00000360090 1139 ntAPPRIS P1 BASIC17.01■□□□□ 0.31
CBX8Q9HC52 CSHL1-204ENST00000392824 823 ntAPPRIS ALT1 TSL 1 (best) BASIC17.01■□□□□ 0.31
CBX8Q9HC52 AC015922.1-201ENST00000421102 1152 ntBASIC17.01■□□□□ 0.31
CBX8Q9HC52 AC064807.1-202ENST00000423716 936 ntTSL 2 BASIC17.01■□□□□ 0.31
CBX8Q9HC52 PITPNA-AS1-201ENST00000425081 542 ntTSL 2 BASIC17.01■□□□□ 0.31
CBX8Q9HC52 HCG15-203ENST00000438190 1032 ntTSL 3 BASIC17.01■□□□□ 0.31
CBX8Q9HC52 ACTG1P14-201ENST00000446382 1122 ntBASIC17.01■□□□□ 0.31
CBX8Q9HC52 CALML4-206ENST00000467889 987 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
CBX8Q9HC52 AC009720.1-201ENST00000511867 586 ntTSL 2 BASIC17.01■□□□□ 0.31
CBX8Q9HC52 BCAR3-210ENST00000539242 2114 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
CBX8Q9HC52 SAMD11P1-201ENST00000571429 661 ntBASIC17.01■□□□□ 0.31
CBX8Q9HC52 MRPL34-205ENST00000600434 793 ntAPPRIS P2 TSL 3 BASIC17.01■□□□□ 0.31
CBX8Q9HC52 RAB9A-203ENST00000618931 737 ntAPPRIS P1 TSL 2 BASIC17.01■□□□□ 0.31
CBX8Q9HC52 LINC00628-201ENST00000628516 1289 ntBASIC17.01■□□□□ 0.31
CBX8Q9HC52 PCSK6-221ENST00000632686 1210 ntTSL 5 BASIC17.01■□□□□ 0.31
Retrieved 100 of 98,524 protein–RNA pairs in 40.1 ms