Protein–RNA interactions for Protein: Q9HAU5

UPF2, Regulator of nonsense transcripts 2, humanhuman

Known RBP Predictions only

Length 1,272 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UPF2Q9HAU5 ARHGAP45-201ENST00000313093 4273 ntAPPRIS P3 TSL 1 (best) BASIC18.78■□□□□ 0.6
UPF2Q9HAU5 ILF2-205ENST00000615950 1906 ntTSL 2 BASIC18.78■□□□□ 0.6
UPF2Q9HAU5 TMEM132C-201ENST00000435159 4947 ntAPPRIS P1 TSL 5 BASIC18.78■□□□□ 0.6
UPF2Q9HAU5 HNRNPUL1-205ENST00000593587 2725 ntTSL 2 BASIC18.78■□□□□ 0.6
UPF2Q9HAU5 EFR3B-202ENST00000401432 5162 ntTSL 2 BASIC18.78■□□□□ 0.6
UPF2Q9HAU5 EPHX2-202ENST00000517536 1600 ntTSL 5 BASIC18.78■□□□□ 0.6
UPF2Q9HAU5 NDUFS2-201ENST00000367993 2042 ntAPPRIS P3 TSL 1 (best) BASIC18.78■□□□□ 0.6
UPF2Q9HAU5 AL928921.2-201ENST00000641325 2442 ntBASIC18.78■□□□□ 0.6
UPF2Q9HAU5 TMEM87B-201ENST00000283206 5212 ntAPPRIS P1 TSL 2 BASIC18.77■□□□□ 0.6
UPF2Q9HAU5 HMGA1-204ENST00000401473 1887 ntAPPRIS ALT1 TSL 1 (best) BASIC18.77■□□□□ 0.6
UPF2Q9HAU5 ARNT2-209ENST00000622346 2932 ntTSL 2 BASIC18.77■□□□□ 0.6
UPF2Q9HAU5 CYP1A1-207ENST00000567032 2107 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
UPF2Q9HAU5 ZSCAN32-215ENST00000618425 2788 ntTSL 2 BASIC18.77■□□□□ 0.6
UPF2Q9HAU5 ACER2-201ENST00000340967 2238 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
UPF2Q9HAU5 BTN1A1-201ENST00000244513 2895 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
UPF2Q9HAU5 AP4M1-205ENST00000422582 1814 ntTSL 2 BASIC18.77■□□□□ 0.6
UPF2Q9HAU5 THEMIS2-203ENST00000373925 1650 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
UPF2Q9HAU5 MINPP1-202ENST00000371996 2415 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
UPF2Q9HAU5 ICA1-207ENST00000406470 2440 ntAPPRIS P3 TSL 1 (best) BASIC18.77■□□□□ 0.6
UPF2Q9HAU5 HIST2H2AB-201ENST00000331128 393 ntAPPRIS P1 BASIC18.77■□□□□ 0.6
UPF2Q9HAU5 BAX-203ENST00000354470 433 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
UPF2Q9HAU5 RBM39-205ENST00000397370 612 ntTSL 2 BASIC18.77■□□□□ 0.6
UPF2Q9HAU5 HRAS-204ENST00000417302 1233 ntTSL 5 BASIC18.77■□□□□ 0.6
UPF2Q9HAU5 MEIS1-AS2-201ENST00000439433 690 ntTSL 2 BASIC18.77■□□□□ 0.6
UPF2Q9HAU5 TARDBPP1-201ENST00000442013 1203 ntBASIC18.77■□□□□ 0.6
UPF2Q9HAU5 HRAS-205ENST00000451590 1151 ntAPPRIS P1 TSL 2 BASIC18.77■□□□□ 0.6
UPF2Q9HAU5 OR10S1-201ENST00000531945 1121 ntAPPRIS P2 BASIC18.77■□□□□ 0.6
UPF2Q9HAU5 AK2-210ENST00000548033 936 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
UPF2Q9HAU5 HEXA-210ENST00000567213 1000 ntTSL 3 BASIC18.77■□□□□ 0.6
UPF2Q9HAU5 KLK15-204ENST00000598239 855 ntAPPRIS P3 TSL 1 (best) BASIC18.77■□□□□ 0.6
UPF2Q9HAU5 TBX18-206ENST00000606784 1230 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
UPF2Q9HAU5 DBI-212ENST00000627305 620 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
UPF2Q9HAU5 AL662799.1-201ENST00000630418 496 ntTSL 5 BASIC18.77■□□□□ 0.6
UPF2Q9HAU5 OR10S1-202ENST00000641123 1121 ntAPPRIS ALT2 BASIC18.77■□□□□ 0.6
UPF2Q9HAU5 AL645728.2-202ENST00000641679 227 ntBASIC18.77■□□□□ 0.6
UPF2Q9HAU5 ATE1-202ENST00000369040 4803 ntTSL 2 BASIC18.77■□□□□ 0.6
UPF2Q9HAU5 BSG-204ENST00000545507 1795 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
UPF2Q9HAU5 CDK16-211ENST00000518022 2022 ntAPPRIS P1 TSL 2 BASIC18.77■□□□□ 0.6
UPF2Q9HAU5 INHBA-205ENST00000638023 2002 ntAPPRIS P1 TSL 5 BASIC18.77■□□□□ 0.6
UPF2Q9HAU5 BAIAP2-220ENST00000575712 2512 ntAPPRIS ALT2 TSL 1 (best) BASIC18.77■□□□□ 0.6
UPF2Q9HAU5 GPR132-203ENST00000539291 2779 ntAPPRIS P3 TSL 2 BASIC18.77■□□□□ 0.6
UPF2Q9HAU5 ITGB4-202ENST00000449880 5689 ntAPPRIS P3 TSL 1 (best) BASIC18.77■□□□□ 0.6
UPF2Q9HAU5 ESS2-201ENST00000252137 5392 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
UPF2Q9HAU5 TAGLN2-202ENST00000368096 1603 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
UPF2Q9HAU5 IRF9-203ENST00000557894 1391 ntTSL 5 BASIC18.77■□□□□ 0.6
UPF2Q9HAU5 E2F7-201ENST00000322886 5740 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.59
UPF2Q9HAU5 PLEKHN1-202ENST00000379409 2455 ntAPPRIS ALT2 TSL 2 BASIC18.77■□□□□ 0.59
UPF2Q9HAU5 COQ8A-203ENST00000366779 5523 ntAPPRIS P1 TSL 2 BASIC18.77■□□□□ 0.59
UPF2Q9HAU5 AP001267.2-201ENST00000532619 2086 ntBASIC18.77■□□□□ 0.59
UPF2Q9HAU5 PCDHGB5-202ENST00000621169 2670 ntAPPRIS ALT2 BASIC18.77■□□□□ 0.59
UPF2Q9HAU5 VAC14-202ENST00000536184 2161 ntTSL 2 BASIC18.76■□□□□ 0.59
UPF2Q9HAU5 MKL1-202ENST00000396617 4505 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
UPF2Q9HAU5 WNT7B-201ENST00000339464 3919 ntAPPRIS P2 TSL 1 (best) BASIC18.76■□□□□ 0.59
UPF2Q9HAU5 TATDN3-202ENST00000366974 2389 ntAPPRIS P3 TSL 1 (best) BASIC18.76■□□□□ 0.59
UPF2Q9HAU5 CYP4X1-201ENST00000371901 2357 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
UPF2Q9HAU5 RSRC1-211ENST00000480820 1410 ntAPPRIS P1 TSL 5 BASIC18.76■□□□□ 0.59
UPF2Q9HAU5 OSBPL8-201ENST00000261183 7239 ntAPPRIS P3 TSL 1 (best) BASIC18.76■□□□□ 0.59
UPF2Q9HAU5 OSBPL8-218ENST00000611266 7239 ntAPPRIS ALT1 TSL 1 (best) BASIC18.76■□□□□ 0.59
UPF2Q9HAU5 AC015802.6-201ENST00000640006 5654 ntAPPRIS P1 TSL 2 BASIC18.76■□□□□ 0.59
UPF2Q9HAU5 DENND3-202ENST00000424248 4740 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
UPF2Q9HAU5 HIF3A-218ENST00000600383 2101 ntTSL 2 BASIC18.76■□□□□ 0.59
UPF2Q9HAU5 DTX3-202ENST00000548198 3199 ntAPPRIS P3 TSL 2 BASIC18.76■□□□□ 0.59
UPF2Q9HAU5 MTRF1L-202ENST00000367231 3539 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
UPF2Q9HAU5 GMPPA-202ENST00000341142 1524 ntAPPRIS P1 TSL 5 BASIC18.76■□□□□ 0.59
UPF2Q9HAU5 ACP5-202ENST00000412435 1527 ntAPPRIS P1 TSL 2 BASIC18.76■□□□□ 0.59
UPF2Q9HAU5 GATB-209ENST00000512306 1519 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
UPF2Q9HAU5 CLCNKB-204ENST00000619181 1544 ntTSL 5 BASIC18.76■□□□□ 0.59
UPF2Q9HAU5 CBX3-202ENST00000396386 1857 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
UPF2Q9HAU5 FAM153B-220ENST00000515817 1966 ntAPPRIS P2 TSL 5 BASIC18.76■□□□□ 0.59
UPF2Q9HAU5 CFLAR-205ENST00000342795 1613 ntTSL 5 BASIC18.76■□□□□ 0.59
UPF2Q9HAU5 ESR2-206ENST00000553796 1634 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
UPF2Q9HAU5 SPAG7-201ENST00000206020 1058 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
UPF2Q9HAU5 PAGE5-201ENST00000289619 741 ntAPPRIS P3 TSL 1 (best) BASIC18.76■□□□□ 0.59
UPF2Q9HAU5 MRPS16-201ENST00000372940 866 ntTSL 2 BASIC18.76■□□□□ 0.59
UPF2Q9HAU5 EEF1B2-202ENST00000392221 880 ntAPPRIS P1 TSL 2 BASIC18.76■□□□□ 0.59
UPF2Q9HAU5 PIK3CD-AS2-201ENST00000415330 939 ntTSL 5 BASIC18.76■□□□□ 0.59
UPF2Q9HAU5 SLED1-202ENST00000512051 380 ntBASIC18.76■□□□□ 0.59
UPF2Q9HAU5 HOXC-AS3-202ENST00000513165 533 ntTSL 3 BASIC18.76■□□□□ 0.59
UPF2Q9HAU5 AC105021.1-202ENST00000570572 669 ntBASIC18.76■□□□□ 0.59
UPF2Q9HAU5 CAND2-206ENST00000626378 333 ntTSL 5 BASIC18.76■□□□□ 0.59
UPF2Q9HAU5 AC084121.4-201ENST00000641598 221 ntBASIC18.76■□□□□ 0.59
UPF2Q9HAU5 AF228730.8-201ENST00000642140 221 ntBASIC18.76■□□□□ 0.59
UPF2Q9HAU5 AC010327.5-201ENST00000586923 3061 ntBASIC18.76■□□□□ 0.59
UPF2Q9HAU5 MFSD11-211ENST00000588460 3612 ntAPPRIS P1 TSL 2 BASIC18.76■□□□□ 0.59
UPF2Q9HAU5 FHOD3-201ENST00000257209 4967 ntAPPRIS P3 TSL 1 (best) BASIC18.76■□□□□ 0.59
UPF2Q9HAU5 SLC6A20-204ENST00000456124 2662 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
UPF2Q9HAU5 DNAJC22-202ENST00000549441 4412 ntAPPRIS P1 TSL 2 BASIC18.75■□□□□ 0.59
UPF2Q9HAU5 CORO1A-208ENST00000565497 1348 ntTSL 5 BASIC18.75■□□□□ 0.59
UPF2Q9HAU5 AC087289.2-201ENST00000587267 1419 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
UPF2Q9HAU5 NRP2-205ENST00000412873 2730 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
UPF2Q9HAU5 PIGS-203ENST00000395346 2815 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
UPF2Q9HAU5 SLC29A1-204ENST00000371731 2258 ntAPPRIS P1 TSL 5 BASIC18.75■□□□□ 0.59
UPF2Q9HAU5 NEDD4L-238ENST00000635997 4402 ntTSL 5 BASIC18.75■□□□□ 0.59
UPF2Q9HAU5 GAD2-201ENST00000259271 2462 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
UPF2Q9HAU5 CLCNKA-201ENST00000331433 2475 ntAPPRIS P3 TSL 1 (best) BASIC18.75■□□□□ 0.59
UPF2Q9HAU5 USP3-204ENST00000540797 5474 ntTSL 2 BASIC18.75■□□□□ 0.59
UPF2Q9HAU5 RPS19-201ENST00000221975 500 ntTSL 3 BASIC18.75■□□□□ 0.59
UPF2Q9HAU5 VAMP1-202ENST00000396308 1113 ntAPPRIS P1 TSL 2 BASIC18.75■□□□□ 0.59
UPF2Q9HAU5 SPDYE17-201ENST00000412399 783 ntBASIC18.75■□□□□ 0.59
UPF2Q9HAU5 MED15P5-201ENST00000423150 992 ntBASIC18.75■□□□□ 0.59
Retrieved 100 of 98,524 protein–RNA pairs in 69.7 ms