Protein–RNA interactions for Protein: Q9H788

SH2D4A, SH2 domain-containing protein 4A, humanhuman

Predictions only

Length 454 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SH2D4AQ9H788 MUC1-202ENST00000338684 1107 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
SH2D4AQ9H788 AGER-203ENST00000375065 665 ntTSL 2 BASIC17.69■□□□□ 0.42
SH2D4AQ9H788 PLA2G5-201ENST00000375108 1161 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
SH2D4AQ9H788 RHOG-203ENST00000396979 1289 ntAPPRIS P1 TSL 3 BASIC17.69■□□□□ 0.42
SH2D4AQ9H788 MIR663B-201ENST00000408361 115 ntBASIC17.69■□□□□ 0.42
SH2D4AQ9H788 BCYRN1-201ENST00000418539 200 ntBASIC17.69■□□□□ 0.42
SH2D4AQ9H788 AC053503.1-201ENST00000429882 519 ntTSL 3 BASIC17.69■□□□□ 0.42
SH2D4AQ9H788 IQCF3-203ENST00000444293 450 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
SH2D4AQ9H788 HSPB1P2-201ENST00000448722 546 ntBASIC17.69■□□□□ 0.42
SH2D4AQ9H788 MUC1-218ENST00000471283 635 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
SH2D4AQ9H788 DERL3-208ENST00000476077 969 ntAPPRIS ALT2 TSL 1 (best) BASIC17.69■□□□□ 0.42
SH2D4AQ9H788 AC104596.1-201ENST00000507826 579 ntTSL 4 BASIC17.69■□□□□ 0.42
SH2D4AQ9H788 RHOG-204ENST00000533217 886 ntAPPRIS P1 TSL 5 BASIC17.69■□□□□ 0.42
SH2D4AQ9H788 AC106820.3-201ENST00000561653 397 ntBASIC17.69■□□□□ 0.42
SH2D4AQ9H788 SMIM24-203ENST00000587847 820 ntAPPRIS ALT2 TSL 1 (best) BASIC17.69■□□□□ 0.42
SH2D4AQ9H788 AC073413.1-201ENST00000603927 732 ntBASIC17.69■□□□□ 0.42
SH2D4AQ9H788 TMEM127-201ENST00000258439 6266 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
SH2D4AQ9H788 MAMSTR-201ENST00000318083 1837 ntAPPRIS P1 TSL 2 BASIC17.69■□□□□ 0.42
SH2D4AQ9H788 TGFB1I1-202ENST00000394858 1803 ntAPPRIS P3 TSL 1 (best) BASIC17.69■□□□□ 0.42
SH2D4AQ9H788 HARS-202ENST00000415192 1401 ntTSL 2 BASIC17.69■□□□□ 0.42
SH2D4AQ9H788 TLL1-204ENST00000507499 4818 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
SH2D4AQ9H788 DGAT2L6-201ENST00000333026 1553 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
SH2D4AQ9H788 NT5DC3-201ENST00000392876 7207 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
SH2D4AQ9H788 LRRC6-213ENST00000620350 1878 ntAPPRIS P2 TSL 1 (best) BASIC17.69■□□□□ 0.42
SH2D4AQ9H788 MYZAP-202ENST00000380565 2181 ntAPPRIS ALT2 TSL 1 (best) BASIC17.69■□□□□ 0.42
SH2D4AQ9H788 TPD52L2-205ENST00000352482 2339 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
SH2D4AQ9H788 TSSC2-204ENST00000529482 2337 ntTSL 2 BASIC17.69■□□□□ 0.42
SH2D4AQ9H788 TPD52L2-210ENST00000615907 2310 ntTSL 4 BASIC17.69■□□□□ 0.42
SH2D4AQ9H788 CHRNB2-201ENST00000368476 5867 ntAPPRIS P2 TSL 1 (best) BASIC17.69■□□□□ 0.42
SH2D4AQ9H788 GATA4-206ENST00000528712 2614 ntTSL 2 BASIC17.68■□□□□ 0.42
SH2D4AQ9H788 CMTM3-203ENST00000460097 1797 ntTSL 2 BASIC17.68■□□□□ 0.42
SH2D4AQ9H788 RASA4B-202ENST00000465829 2931 ntAPPRIS ALT1 TSL 1 (best) BASIC17.68■□□□□ 0.42
SH2D4AQ9H788 ZNF7-207ENST00000528372 2905 ntAPPRIS P3 TSL 1 (best) BASIC17.68■□□□□ 0.42
SH2D4AQ9H788 PRKD2-214ENST00000600194 2923 ntAPPRIS ALT2 TSL 2 BASIC17.68■□□□□ 0.42
SH2D4AQ9H788 MBD4-204ENST00000503197 2099 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
SH2D4AQ9H788 GPRIN1-201ENST00000303991 4211 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
SH2D4AQ9H788 ARL15-201ENST00000502271 3248 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
SH2D4AQ9H788 SYNRG-222ENST00000614941 3406 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
SH2D4AQ9H788 AC019205.2-202ENST00000441363 2403 ntTSL 5 BASIC17.68■□□□□ 0.42
SH2D4AQ9H788 SLC25A45-214ENST00000534028 2432 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
SH2D4AQ9H788 SUSD4-204ENST00000366878 3025 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
SH2D4AQ9H788 PNRC1-203ENST00000369472 816 ntTSL 2 BASIC17.68■□□□□ 0.42
SH2D4AQ9H788 SLC2A13-202ENST00000380858 3082 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
SH2D4AQ9H788 RBPMS-204ENST00000397323 2941 ntAPPRIS P3 TSL 1 (best) BASIC17.68■□□□□ 0.42
SH2D4AQ9H788 ALG9-201ENST00000398006 2345 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
SH2D4AQ9H788 AL136309.1-201ENST00000403917 691 ntBASIC17.68■□□□□ 0.42
SH2D4AQ9H788 MCFD2-204ENST00000409207 1113 ntAPPRIS P1 TSL 2 BASIC17.68■□□□□ 0.42
SH2D4AQ9H788 KRTAP10-13P-201ENST00000412914 571 ntBASIC17.68■□□□□ 0.42
SH2D4AQ9H788 TRIM13-204ENST00000420995 2607 ntAPPRIS P3 TSL 1 (best) BASIC17.68■□□□□ 0.42
SH2D4AQ9H788 C9orf116-205ENST00000429260 678 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
SH2D4AQ9H788 RGS5-214ENST00000429865 754 ntTSL 3 BASIC17.68■□□□□ 0.42
SH2D4AQ9H788 FGF13-204ENST00000436198 1165 ntTSL 2 BASIC17.68■□□□□ 0.42
SH2D4AQ9H788 MESTP3-201ENST00000503460 968 ntBASIC17.68■□□□□ 0.42
SH2D4AQ9H788 BTNL8-205ENST00000505126 1294 ntTSL 2 BASIC17.68■□□□□ 0.42
SH2D4AQ9H788 AL391280.1-201ENST00000506969 1062 ntBASIC17.68■□□□□ 0.42
SH2D4AQ9H788 AC090735.1-201ENST00000523881 488 ntTSL 4 BASIC17.68■□□□□ 0.42
SH2D4AQ9H788 AC100818.1-201ENST00000524167 563 ntTSL 4 BASIC17.68■□□□□ 0.42
SH2D4AQ9H788 HAUS2-208ENST00000568876 1702 ntTSL 4 BASIC17.68■□□□□ 0.42
SH2D4AQ9H788 GLIS2-AS1-201ENST00000576080 340 ntTSL 2 BASIC17.68■□□□□ 0.42
SH2D4AQ9H788 NAT9-222ENST00000583476 583 ntTSL 3 BASIC17.68■□□□□ 0.42
SH2D4AQ9H788 LINC00479-204ENST00000589300 718 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
SH2D4AQ9H788 AC008537.4-201ENST00000595728 1103 ntTSL 5 BASIC17.68■□□□□ 0.42
SH2D4AQ9H788 AC244517.4-201ENST00000624549 580 ntTSL 4 BASIC17.68■□□□□ 0.42
SH2D4AQ9H788 AC010424.3-201ENST00000635510 1745 ntTSL 5 BASIC17.68■□□□□ 0.42
SH2D4AQ9H788 AC244452.3-201ENST00000636814 210 ntBASIC17.68■□□□□ 0.42
SH2D4AQ9H788 ADRA2A-201ENST00000280155 3745 ntAPPRIS P1 BASIC17.68■□□□□ 0.42
SH2D4AQ9H788 MBNL1-202ENST00000282488 6458 ntTSL 5 BASIC17.68■□□□□ 0.42
SH2D4AQ9H788 NDRG2-206ENST00000397844 2096 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
SH2D4AQ9H788 LEKR1-209ENST00000491763 1940 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
SH2D4AQ9H788 PICALM-204ENST00000526033 3613 ntAPPRIS ALT1 TSL 1 (best) BASIC17.68■□□□□ 0.42
SH2D4AQ9H788 NFYC-205ENST00000372654 1455 ntAPPRIS P3 TSL 1 (best) BASIC17.68■□□□□ 0.42
SH2D4AQ9H788 ISPD-202ENST00000407010 5524 ntAPPRIS P1 TSL 5 BASIC17.68■□□□□ 0.42
SH2D4AQ9H788 NF2-202ENST00000338641 6025 ntAPPRIS P4 TSL 1 (best) BASIC17.68■□□□□ 0.42
SH2D4AQ9H788 ZNF767P-201ENST00000463567 3520 ntTSL 2 BASIC17.68■□□□□ 0.42
SH2D4AQ9H788 BTBD10-208ENST00000528120 1662 ntTSL 2 BASIC17.67■□□□□ 0.42
SH2D4AQ9H788 ZNF750-202ENST00000572562 1513 ntTSL 2 BASIC17.67■□□□□ 0.42
SH2D4AQ9H788 AC092198.1-201ENST00000447651 2691 ntTSL 2 BASIC17.67■□□□□ 0.42
SH2D4AQ9H788 ZNF644-201ENST00000337393 5763 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
SH2D4AQ9H788 RBCK1-201ENST00000353660 2511 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
SH2D4AQ9H788 LMNB1-201ENST00000261366 2878 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
SH2D4AQ9H788 LAP3-201ENST00000226299 2213 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
SH2D4AQ9H788 KLHL42-201ENST00000381271 6703 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
SH2D4AQ9H788 TRIM72-201ENST00000322122 8500 ntAPPRIS P1 TSL 2 BASIC17.67■□□□□ 0.42
SH2D4AQ9H788 ATG10-203ENST00000458350 1795 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
SH2D4AQ9H788 MTCL1-203ENST00000400050 6042 ntAPPRIS P2 TSL 5 BASIC17.67■□□□□ 0.42
SH2D4AQ9H788 CLRN1-203ENST00000328863 738 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
SH2D4AQ9H788 LAMTOR4-201ENST00000341942 605 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
SH2D4AQ9H788 GTF3C5-204ENST00000372108 2110 ntAPPRIS ALT2 TSL 1 (best) BASIC17.67■□□□□ 0.42
SH2D4AQ9H788 TISP43-201ENST00000409793 538 ntTSL 4 BASIC17.67■□□□□ 0.42
SH2D4AQ9H788 ADAMTSL1-210ENST00000431052 824 ntTSL 2 BASIC17.67■□□□□ 0.42
SH2D4AQ9H788 LINC01762-204ENST00000434879 436 ntTSL 2 BASIC17.67■□□□□ 0.42
SH2D4AQ9H788 RPL35A-205ENST00000448864 549 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
SH2D4AQ9H788 AC091804.1-201ENST00000486888 567 ntBASIC17.67■□□□□ 0.42
SH2D4AQ9H788 TSR1-204ENST00000576112 1290 ntTSL 5 BASIC17.67■□□□□ 0.42
SH2D4AQ9H788 AC011495.3-201ENST00000596472 427 ntTSL 2 BASIC17.67■□□□□ 0.42
SH2D4AQ9H788 SF3A2-201ENST00000221494 1963 ntAPPRIS P2 TSL 1 (best) BASIC17.67■□□□□ 0.42
SH2D4AQ9H788 DRC3-216ENST00000584166 1953 ntTSL 5 BASIC17.67■□□□□ 0.42
SH2D4AQ9H788 MAP2K5-201ENST00000178640 2347 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
SH2D4AQ9H788 PMP22-201ENST00000312280 1810 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
SH2D4AQ9H788 RCAN3-202ENST00000374395 6802 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Retrieved 100 of 98,524 protein–RNA pairs in 35.6 ms