Protein–RNA interactions for Protein: Q9H4D5

NXF3, Nuclear RNA export factor 3, humanhuman

Known RBP Predictions only

Length 531 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NXF3Q9H4D5 ANKRD44-203ENST00000409153 2724 ntTSL 2 BASIC16.34■□□□□ 0.21
NXF3Q9H4D5 CPEB2-203ENST00000382395 5524 ntAPPRIS ALT2 TSL 1 (best) BASIC16.34■□□□□ 0.21
NXF3Q9H4D5 USP13-201ENST00000263966 8323 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
NXF3Q9H4D5 PIGT-202ENST00000279036 2245 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
NXF3Q9H4D5 ASAH1-249ENST00000637528 2215 ntTSL 5 BASIC16.34■□□□□ 0.21
NXF3Q9H4D5 CPEB2-201ENST00000259997 5612 ntAPPRIS ALT2 TSL 5 BASIC16.34■□□□□ 0.21
NXF3Q9H4D5 AC020910.5-201ENST00000623668 1865 ntBASIC16.34■□□□□ 0.21
NXF3Q9H4D5 SETD4-205ENST00000399208 1165 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
NXF3Q9H4D5 MIR663B-201ENST00000408361 115 ntBASIC16.34■□□□□ 0.21
NXF3Q9H4D5 AL160290.2-201ENST00000448347 831 ntTSL 3 BASIC16.34■□□□□ 0.21
NXF3Q9H4D5 FBXL8-208ENST00000521920 574 ntTSL 4 BASIC16.34■□□□□ 0.21
NXF3Q9H4D5 LINC00479-204ENST00000589300 718 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
NXF3Q9H4D5 AC244157.2-201ENST00000616239 1006 ntBASIC16.34■□□□□ 0.21
NXF3Q9H4D5 AP001002.3-201ENST00000623482 206 ntBASIC16.34■□□□□ 0.21
NXF3Q9H4D5 LINC00595-217ENST00000635545 549 ntTSL 4 BASIC16.34■□□□□ 0.21
NXF3Q9H4D5 EIF4G3-205ENST00000400422 5762 ntAPPRIS ALT2 TSL 1 (best) BASIC16.34■□□□□ 0.21
NXF3Q9H4D5 GRN-222ENST00000639447 1314 ntTSL 2 BASIC16.34■□□□□ 0.21
NXF3Q9H4D5 MAP1LC3B-201ENST00000268607 2688 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
NXF3Q9H4D5 CCDC40-202ENST00000374876 2010 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
NXF3Q9H4D5 ATP6V0A1-204ENST00000537728 2774 ntTSL 2 BASIC16.34■□□□□ 0.21
NXF3Q9H4D5 TRIM45-203ENST00000369464 3495 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
NXF3Q9H4D5 CNTLN-202ENST00000380647 5576 ntAPPRIS P3 TSL 1 (best) BASIC16.34■□□□□ 0.21
NXF3Q9H4D5 DBH-AS1-201ENST00000425189 2139 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
NXF3Q9H4D5 AP000593.2-201ENST00000542775 1433 ntBASIC16.34■□□□□ 0.21
NXF3Q9H4D5 EPHB4-201ENST00000358173 4329 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
NXF3Q9H4D5 RPP40-202ENST00000380051 1483 ntAPPRIS P1 TSL 5 BASIC16.34■□□□□ 0.21
NXF3Q9H4D5 CDH7-203ENST00000536984 3766 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
NXF3Q9H4D5 PGA5-201ENST00000312403 1519 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
NXF3Q9H4D5 GNB2-202ENST00000393924 1524 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
NXF3Q9H4D5 AC011840.2-201ENST00000563063 1520 ntBASIC16.34■□□□□ 0.21
NXF3Q9H4D5 PLVAP-201ENST00000252590 2305 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
NXF3Q9H4D5 ADCY1-204ENST00000621543 1647 ntTSL 5 BASIC16.34■□□□□ 0.21
NXF3Q9H4D5 RUNDC3B-202ENST00000338056 4099 ntTSL 2 BASIC16.33■□□□□ 0.21
NXF3Q9H4D5 AC007743.1-201ENST00000596663 3075 ntTSL 2 BASIC16.33■□□□□ 0.21
NXF3Q9H4D5 HSPA12B-201ENST00000254963 3151 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.21
NXF3Q9H4D5 C15orf61-201ENST00000342683 4253 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.21
NXF3Q9H4D5 PTGES3L-AARSD1-204ENST00000421990 2150 ntAPPRIS P1 TSL 2 BASIC16.33■□□□□ 0.2
NXF3Q9H4D5 KLC1-207ENST00000445352 2416 ntTSL 5 BASIC16.33■□□□□ 0.2
NXF3Q9H4D5 C1orf123-201ENST00000294360 1085 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
NXF3Q9H4D5 GTSF1-201ENST00000305879 804 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
NXF3Q9H4D5 RHOC-206ENST00000369637 888 ntAPPRIS P1 TSL 3 BASIC16.33■□□□□ 0.2
NXF3Q9H4D5 AL136309.1-201ENST00000403917 691 ntBASIC16.33■□□□□ 0.2
NXF3Q9H4D5 KRTAP10-13P-201ENST00000412914 571 ntBASIC16.33■□□□□ 0.2
NXF3Q9H4D5 AC004945.1-201ENST00000416738 983 ntBASIC16.33■□□□□ 0.2
NXF3Q9H4D5 NREP-204ENST00000419114 704 ntAPPRIS P1 TSL 2 BASIC16.33■□□□□ 0.2
NXF3Q9H4D5 AL450003.2-201ENST00000450445 428 ntTSL 5 BASIC16.33■□□□□ 0.2
NXF3Q9H4D5 SELENOW-201ENST00000509570 881 ntTSL 5 BASIC16.33■□□□□ 0.2
NXF3Q9H4D5 AL021546.1-201ENST00000551806 552 ntAPPRIS P1 TSL 3 BASIC16.33■□□□□ 0.2
NXF3Q9H4D5 MAX-211ENST00000555667 574 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
NXF3Q9H4D5 ACYP1-206ENST00000555694 565 ntAPPRIS P1 TSL 3 BASIC16.33■□□□□ 0.2
NXF3Q9H4D5 NIP7-208ENST00000569637 1099 ntTSL 2 BASIC16.33■□□□□ 0.2
NXF3Q9H4D5 DHRS7C-202ENST00000571134 984 ntAPPRIS ALT1 TSL 1 (best) BASIC16.33■□□□□ 0.2
NXF3Q9H4D5 AC129510.1-201ENST00000579979 555 ntTSL 3 BASIC16.33■□□□□ 0.2
NXF3Q9H4D5 AC004637.1-201ENST00000586675 482 ntTSL 3 BASIC16.33■□□□□ 0.2
NXF3Q9H4D5 AC138696.2-201ENST00000607376 223 ntBASIC16.33■□□□□ 0.2
NXF3Q9H4D5 AP000229.1-202ENST00000609365 559 ntTSL 4 BASIC16.33■□□□□ 0.2
NXF3Q9H4D5 ZBTB46-201ENST00000245663 5185 ntAPPRIS P1 TSL 5 BASIC16.33■□□□□ 0.2
NXF3Q9H4D5 SYT3-201ENST00000338916 2915 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
NXF3Q9H4D5 TLE3-223ENST00000560939 3021 ntTSL 5 BASIC16.33■□□□□ 0.2
NXF3Q9H4D5 SGCE-205ENST00000437425 1508 ntTSL 2 BASIC16.33■□□□□ 0.2
NXF3Q9H4D5 LRP11-201ENST00000239367 3260 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
NXF3Q9H4D5 VSIG10-202ENST00000359236 4946 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
NXF3Q9H4D5 OTUD6A-201ENST00000338352 1689 ntAPPRIS P1 BASIC16.33■□□□□ 0.2
NXF3Q9H4D5 CBX3-203ENST00000409747 1717 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
NXF3Q9H4D5 AC245123.1-202ENST00000612422 1719 ntTSL 5 BASIC16.33■□□□□ 0.2
NXF3Q9H4D5 ADCYAP1R1-204ENST00000409489 1761 ntTSL 5 BASIC16.33■□□□□ 0.2
NXF3Q9H4D5 TBP-202ENST00000392092 1903 ntAPPRIS P3 TSL 1 (best) BASIC16.33■□□□□ 0.2
NXF3Q9H4D5 TBXAS1-208ENST00000448866 1963 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
NXF3Q9H4D5 FRS2-206ENST00000549921 1952 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
NXF3Q9H4D5 PNPLA5-202ENST00000381198 2000 ntTSL 2 BASIC16.33■□□□□ 0.2
NXF3Q9H4D5 ZNF208-205ENST00000601773 2027 ntTSL 2 BASIC16.33■□□□□ 0.2
NXF3Q9H4D5 ALPL-207ENST00000540617 2131 ntAPPRIS ALT2 TSL 2 BASIC16.33■□□□□ 0.2
NXF3Q9H4D5 PACS1-201ENST00000320580 4392 ntAPPRIS P2 TSL 1 (best) BASIC16.33■□□□□ 0.2
NXF3Q9H4D5 TSC22D3-201ENST00000315660 2213 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
NXF3Q9H4D5 EXOC7-213ENST00000467929 2260 ntTSL 2 BASIC16.33■□□□□ 0.2
NXF3Q9H4D5 NCOA1-205ENST00000406961 7289 ntAPPRIS P4 TSL 5 BASIC16.33■□□□□ 0.2
NXF3Q9H4D5 MGAT1-201ENST00000307826 2761 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
NXF3Q9H4D5 DLGAP4-205ENST00000401952 4881 ntAPPRIS P4 TSL 5 BASIC16.32■□□□□ 0.2
NXF3Q9H4D5 HDHD3-201ENST00000238379 1834 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
NXF3Q9H4D5 TMEM263-201ENST00000280756 3362 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
NXF3Q9H4D5 C9orf24-201ENST00000297623 1151 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
NXF3Q9H4D5 C8orf74-201ENST00000304519 1036 ntAPPRIS P2 TSL 1 (best) BASIC16.32■□□□□ 0.2
NXF3Q9H4D5 C3orf22-201ENST00000318225 1000 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
NXF3Q9H4D5 RNF31-201ENST00000324103 3627 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
NXF3Q9H4D5 IL1RN-203ENST00000361779 1922 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
NXF3Q9H4D5 AL022323.1-201ENST00000366110 957 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
NXF3Q9H4D5 TFB2M-201ENST00000366514 1848 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
NXF3Q9H4D5 C9orf24-205ENST00000379133 712 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
NXF3Q9H4D5 PPP1R14B-202ENST00000392210 600 ntTSL 3 BASIC16.32■□□□□ 0.2
NXF3Q9H4D5 RASGEF1A-204ENST00000395810 3235 ntAPPRIS P3 TSL 1 (best) BASIC16.32■□□□□ 0.2
NXF3Q9H4D5 RN7SKP175-201ENST00000408472 289 ntBASIC16.32■□□□□ 0.2
NXF3Q9H4D5 AC053503.1-201ENST00000429882 519 ntTSL 3 BASIC16.32■□□□□ 0.2
NXF3Q9H4D5 INTS14-204ENST00000442903 1863 ntTSL 2 BASIC16.32■□□□□ 0.2
NXF3Q9H4D5 WDR45-224ENST00000485908 1301 ntTSL 5 BASIC16.32■□□□□ 0.2
NXF3Q9H4D5 NPHP3-AS1-201ENST00000489343 2957 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
NXF3Q9H4D5 TUB-AS1-201ENST00000506601 2021 ntTSL 2 BASIC16.32■□□□□ 0.2
NXF3Q9H4D5 AC100850.1-201ENST00000506768 649 ntBASIC16.32■□□□□ 0.2
NXF3Q9H4D5 GTF2H2-204ENST00000517900 659 ntTSL 5 BASIC16.32■□□□□ 0.2
NXF3Q9H4D5 RPL27A-202ENST00000524496 558 ntTSL 3 BASIC16.32■□□□□ 0.2
NXF3Q9H4D5 P2RX5-208ENST00000552050 1536 ntTSL 2 BASIC16.32■□□□□ 0.2
Retrieved 100 of 98,524 protein–RNA pairs in 39.5 ms