Protein–RNA interactions for Protein: Q9BZL3

SMIM3, Small integral membrane protein 3, humanhuman

Predictions only

Length 60 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMIM3Q9BZL3 IRF9-203ENST00000557894 1391 ntTSL 5 BASIC12.53□□□□□ -0.4
SMIM3Q9BZL3 VPS52-212ENST00000445902 2960 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
SMIM3Q9BZL3 MED15-203ENST00000382974 2235 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
SMIM3Q9BZL3 AL353803.2-201ENST00000436510 1846 ntTSL 5 BASIC12.53□□□□□ -0.4
SMIM3Q9BZL3 LY6E-207ENST00000520466 1419 ntAPPRIS P2 TSL 2 BASIC12.53□□□□□ -0.4
SMIM3Q9BZL3 SIX5-204ENST00000622857 1401 ntTSL 5 BASIC12.53□□□□□ -0.4
SMIM3Q9BZL3 JMJD6-208ENST00000617192 5517 ntTSL 5 BASIC12.53□□□□□ -0.4
SMIM3Q9BZL3 BTRC-202ENST00000370187 6134 ntAPPRIS P4 TSL 1 (best) BASIC12.53□□□□□ -0.4
SMIM3Q9BZL3 PARP3-203ENST00000431474 2360 ntAPPRIS P3 TSL 1 (best) BASIC12.52□□□□□ -0.4
SMIM3Q9BZL3 MAP3K4-203ENST00000366920 5445 ntAPPRIS ALT2 TSL 5 BASIC12.52□□□□□ -0.4
SMIM3Q9BZL3 HTD2-201ENST00000461393 1508 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.4
SMIM3Q9BZL3 TMEM200A-204ENST00000617887 2899 ntAPPRIS P1 TSL 2 BASIC12.52□□□□□ -0.4
SMIM3Q9BZL3 EPHB1-201ENST00000398015 4672 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.4
SMIM3Q9BZL3 TYK2-205ENST00000525621 4347 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.4
SMIM3Q9BZL3 PLEKHG2-206ENST00000458508 3898 ntAPPRIS ALT2 TSL 2 BASIC12.52□□□□□ -0.4
SMIM3Q9BZL3 ABLIM2-213ENST00000514025 2974 ntTSL 2 BASIC12.52□□□□□ -0.4
SMIM3Q9BZL3 UCK1-203ENST00000372211 2114 ntTSL 3 BASIC12.52□□□□□ -0.4
SMIM3Q9BZL3 SNX19-211ENST00000533214 3096 ntTSL 1 (best) BASIC12.52□□□□□ -0.4
SMIM3Q9BZL3 NCLN-201ENST00000246117 4005 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.4
SMIM3Q9BZL3 ALOX15B-201ENST00000380173 2605 ntTSL 1 (best) BASIC12.52□□□□□ -0.4
SMIM3Q9BZL3 CDK20-202ENST00000336654 2176 ntTSL 2 BASIC12.52□□□□□ -0.4
SMIM3Q9BZL3 NFE2L2-202ENST00000397063 2651 ntTSL 1 (best) BASIC12.52□□□□□ -0.41
SMIM3Q9BZL3 WDFY1-201ENST00000233055 4660 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
SMIM3Q9BZL3 SLC22A5-201ENST00000245407 3237 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
SMIM3Q9BZL3 ALCAM-201ENST00000306107 4701 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
SMIM3Q9BZL3 ADRA1A-202ENST00000354550 1765 ntTSL 1 (best) BASIC12.52□□□□□ -0.41
SMIM3Q9BZL3 PSCA-201ENST00000301258 1020 ntAPPRIS P2 TSL 1 (best) BASIC12.52□□□□□ -0.41
SMIM3Q9BZL3 EFCAB2-203ENST00000366523 1233 ntAPPRIS P1 TSL 3 BASIC12.52□□□□□ -0.41
SMIM3Q9BZL3 TRAPPC3-202ENST00000373162 1056 ntTSL 2 BASIC12.52□□□□□ -0.41
SMIM3Q9BZL3 MPG-203ENST00000397817 1039 ntAPPRIS ALT2 TSL 2 BASIC12.52□□□□□ -0.41
SMIM3Q9BZL3 LENG8-AS1-201ENST00000416022 582 ntTSL 3 BASIC12.52□□□□□ -0.41
SMIM3Q9BZL3 IFT27-205ENST00000433985 1095 ntAPPRIS ALT1 TSL 1 (best) BASIC12.52□□□□□ -0.41
SMIM3Q9BZL3 AL034550.1-201ENST00000442179 986 ntTSL 1 (best) BASIC12.52□□□□□ -0.41
SMIM3Q9BZL3 SLC2A1-204ENST00000460369 541 ntTSL 2 BASIC12.52□□□□□ -0.41
SMIM3Q9BZL3 CXCL1P1-201ENST00000502804 216 ntBASIC12.52□□□□□ -0.41
SMIM3Q9BZL3 REEP2-206ENST00000506158 1021 ntTSL 2 BASIC12.52□□□□□ -0.41
SMIM3Q9BZL3 CIPC-205ENST00000555437 566 ntTSL 3 BASIC12.52□□□□□ -0.41
SMIM3Q9BZL3 AC021087.4-201ENST00000563761 564 ntBASIC12.52□□□□□ -0.41
SMIM3Q9BZL3 FLYWCH2-203ENST00000572006 754 ntAPPRIS ALT2 TSL 2 BASIC12.52□□□□□ -0.41
SMIM3Q9BZL3 PAM16-208ENST00000573553 722 ntTSL 2 BASIC12.52□□□□□ -0.41
SMIM3Q9BZL3 PNMT-203ENST00000581428 677 ntTSL 2 BASIC12.52□□□□□ -0.41
SMIM3Q9BZL3 ATPAF2-213ENST00000585101 566 ntTSL 4 BASIC12.52□□□□□ -0.41
SMIM3Q9BZL3 EEF2KMT-206ENST00000587133 873 ntAPPRIS ALT2 TSL 3 BASIC12.52□□□□□ -0.41
SMIM3Q9BZL3 AC011467.4-201ENST00000594891 528 ntBASIC12.52□□□□□ -0.41
SMIM3Q9BZL3 AC005523.1-201ENST00000598782 418 ntTSL 5 BASIC12.52□□□□□ -0.41
SMIM3Q9BZL3 AC016727.1-203ENST00000603199 540 ntTSL 4 BASIC12.52□□□□□ -0.41
SMIM3Q9BZL3 AC097376.2-204ENST00000609359 627 ntTSL 2 BASIC12.52□□□□□ -0.41
SMIM3Q9BZL3 PHOSPHO2-206ENST00000616481 1252 ntAPPRIS P1 TSL 3 BASIC12.52□□□□□ -0.41
SMIM3Q9BZL3 SPINK2-205ENST00000616980 677 ntTSL 5 BASIC12.52□□□□□ -0.41
SMIM3Q9BZL3 AC004790.2-201ENST00000623588 572 ntBASIC12.52□□□□□ -0.41
SMIM3Q9BZL3 GSE1-203ENST00000405402 4366 ntAPPRIS ALT2 TSL 1 (best) BASIC12.52□□□□□ -0.41
SMIM3Q9BZL3 LDB3-209ENST00000623056 2314 ntTSL 5 BASIC12.52□□□□□ -0.41
SMIM3Q9BZL3 C15orf39-202ENST00000394987 4430 ntAPPRIS P2 TSL 1 (best) BASIC12.52□□□□□ -0.41
SMIM3Q9BZL3 TM4SF19-AS1-203ENST00000452051 1829 ntTSL 2 BASIC12.52□□□□□ -0.41
SMIM3Q9BZL3 PRAMEF25-202ENST00000619661 1840 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
SMIM3Q9BZL3 CASQ1-201ENST00000368078 1897 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
SMIM3Q9BZL3 MUTYH-206ENST00000372115 1888 ntTSL 1 (best) BASIC12.52□□□□□ -0.41
SMIM3Q9BZL3 PML-202ENST00000268059 3029 ntAPPRIS ALT2 TSL 1 (best) BASIC12.52□□□□□ -0.41
SMIM3Q9BZL3 EDEM2-202ENST00000374492 1919 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
SMIM3Q9BZL3 CDCA3-207ENST00000538862 1943 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
SMIM3Q9BZL3 PAPD7-207ENST00000631941 1902 ntAPPRIS P1 TSL 5 BASIC12.52□□□□□ -0.41
SMIM3Q9BZL3 OTP-201ENST00000306422 3669 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
SMIM3Q9BZL3 IGF2BP2-202ENST00000382199 3688 ntAPPRIS P3 TSL 1 (best) BASIC12.52□□□□□ -0.41
SMIM3Q9BZL3 SPIB-201ENST00000270632 1443 ntTSL 1 (best) BASIC12.52□□□□□ -0.41
SMIM3Q9BZL3 UNKL-202ENST00000301712 1431 ntTSL 1 (best) BASIC12.52□□□□□ -0.41
SMIM3Q9BZL3 GAL3ST4-202ENST00000411994 1404 ntTSL 2 BASIC12.52□□□□□ -0.41
SMIM3Q9BZL3 TEX264-209ENST00000457573 1448 ntAPPRIS P3 TSL 5 BASIC12.52□□□□□ -0.41
SMIM3Q9BZL3 NEK9-201ENST00000238616 8310 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
SMIM3Q9BZL3 MPRIP-202ENST00000341712 3846 ntAPPRIS P3 TSL 5 BASIC12.52□□□□□ -0.41
SMIM3Q9BZL3 EGFR-207ENST00000455089 3844 ntTSL 1 (best) BASIC12.52□□□□□ -0.41
SMIM3Q9BZL3 TMEM201-201ENST00000340305 3851 ntTSL 1 (best) BASIC12.52□□□□□ -0.41
SMIM3Q9BZL3 KLK10-202ENST00000358789 1508 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
SMIM3Q9BZL3 SYT1-204ENST00000457153 4592 ntAPPRIS ALT1 TSL 1 (best) BASIC12.52□□□□□ -0.41
SMIM3Q9BZL3 AC084364.1-201ENST00000551967 1556 ntBASIC12.52□□□□□ -0.41
SMIM3Q9BZL3 CDHR5-203ENST00000397542 3489 ntAPPRIS P4 TSL 1 (best) BASIC12.52□□□□□ -0.41
SMIM3Q9BZL3 SETD7-204ENST00000506866 1602 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
SMIM3Q9BZL3 TMEM209-202ENST00000462753 2322 ntAPPRIS ALT1 TSL 5 BASIC12.51□□□□□ -0.41
SMIM3Q9BZL3 DMAC2-201ENST00000221943 1692 ntAPPRIS P1 TSL 2 BASIC12.51□□□□□ -0.41
SMIM3Q9BZL3 DLGAP1-213ENST00000534970 2365 ntTSL 2 BASIC12.51□□□□□ -0.41
SMIM3Q9BZL3 ZMYND15-201ENST00000269289 2448 ntTSL 5 BASIC12.51□□□□□ -0.41
SMIM3Q9BZL3 MIR497HG-202ENST00000572453 3838 ntBASIC12.51□□□□□ -0.41
SMIM3Q9BZL3 PCMTD2-204ENST00000369758 3212 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
SMIM3Q9BZL3 MAGED4B-207ENST00000485287 2618 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
SMIM3Q9BZL3 GNAO1-214ENST00000638705 3529 ntAPPRIS P5 TSL 1 (best) BASIC12.51□□□□□ -0.41
SMIM3Q9BZL3 A1CF-202ENST00000373993 1997 ntAPPRIS P4 TSL 1 (best) BASIC12.51□□□□□ -0.41
SMIM3Q9BZL3 CAP2-209ENST00000616440 2776 ntTSL 2 BASIC12.51□□□□□ -0.41
SMIM3Q9BZL3 CACNA1G-229ENST00000514181 6795 ntAPPRIS ALT2 TSL 1 (best) BASIC12.51□□□□□ -0.41
SMIM3Q9BZL3 ZNF335-201ENST00000322927 4430 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
SMIM3Q9BZL3 TLE3-211ENST00000557997 3683 ntAPPRIS ALT1 TSL 1 (best) BASIC12.51□□□□□ -0.41
SMIM3Q9BZL3 TOMM34-201ENST00000372813 2062 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
SMIM3Q9BZL3 SESN3-203ENST00000536441 9558 ntAPPRIS P1 TSL 2 BASIC12.51□□□□□ -0.41
SMIM3Q9BZL3 SSNA1-201ENST00000322310 896 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
SMIM3Q9BZL3 BET1L-202ENST00000332865 533 ntTSL 5 BASIC12.51□□□□□ -0.41
SMIM3Q9BZL3 IGF2-202ENST00000381392 1005 ntAPPRIS ALT1 TSL 1 (best) BASIC12.51□□□□□ -0.41
SMIM3Q9BZL3 PDLIM7-205ENST00000393551 1226 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
SMIM3Q9BZL3 AC004987.2-201ENST00000395959 1148 ntBASIC12.51□□□□□ -0.41
SMIM3Q9BZL3 NAPB-202ENST00000398425 3824 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
SMIM3Q9BZL3 ODF3B-202ENST00000401779 869 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
SMIM3Q9BZL3 ODF3B-203ENST00000403326 643 ntTSL 3 BASIC12.51□□□□□ -0.41
SMIM3Q9BZL3 ICAM2-202ENST00000418105 1252 ntAPPRIS P1 TSL 3 BASIC12.51□□□□□ -0.41
Retrieved 100 of 98,524 protein–RNA pairs in 35.6 ms