Protein–RNA interactions for Protein: Q99986

VRK1, Serine/threonine-protein kinase VRK1, humanhuman

Predicted RBP Predictions only

Length 396 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VRK1Q99986 AL031056.2-201ENST00000637957 1217 ntTSL 5 BASIC13.57□□□□□ -0.24
VRK1Q99986 ASAH1-254ENST00000637636 2218 ntAPPRIS ALT1 TSL 5 BASIC13.57□□□□□ -0.24
VRK1Q99986 SMIM5-201ENST00000375215 1546 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
VRK1Q99986 TNFSF8-203ENST00000618336 1523 ntTSL 3 BASIC13.57□□□□□ -0.24
VRK1Q99986 IFT52-201ENST00000373030 1757 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
VRK1Q99986 TMEM150A-203ENST00000409668 1776 ntAPPRIS P1 TSL 2 BASIC13.57□□□□□ -0.24
VRK1Q99986 CPSF1-213ENST00000620219 4462 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
VRK1Q99986 TNIK-202ENST00000341852 4727 ntAPPRIS ALT2 TSL 1 (best) BASIC13.57□□□□□ -0.24
VRK1Q99986 DENND1B-211ENST00000620048 8378 ntAPPRIS ALT2 TSL 5 BASIC13.57□□□□□ -0.24
VRK1Q99986 PMP22-209ENST00000612492 1822 ntAPPRIS P1 TSL 3 BASIC13.57□□□□□ -0.24
VRK1Q99986 FKBP5-201ENST00000357266 3772 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
VRK1Q99986 P2RY1-201ENST00000305097 6747 ntAPPRIS P1 BASIC13.57□□□□□ -0.24
VRK1Q99986 CABP4-201ENST00000325656 2559 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
VRK1Q99986 FAM192A-201ENST00000309137 2848 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
VRK1Q99986 ENDOV-204ENST00000518137 2815 ntAPPRIS P1 TSL 2 BASIC13.57□□□□□ -0.24
VRK1Q99986 APBB1-202ENST00000311051 2619 ntAPPRIS P3 TSL 1 (best) BASIC13.57□□□□□ -0.24
VRK1Q99986 AL035460.1-201ENST00000380593 1866 ntAPPRIS P1 TSL 2 BASIC13.57□□□□□ -0.24
VRK1Q99986 YTHDF3-205ENST00000539294 5163 ntAPPRIS P2 TSL 1 (best) BASIC13.57□□□□□ -0.24
VRK1Q99986 RPRD1A-202ENST00000399022 4438 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
VRK1Q99986 CHST5-201ENST00000336257 3245 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
VRK1Q99986 SUN2-203ENST00000406622 2725 ntAPPRIS P1 TSL 2 BASIC13.56□□□□□ -0.24
VRK1Q99986 ZEB2-225ENST00000558170 4012 ntAPPRIS P2 TSL 1 (best) BASIC13.56□□□□□ -0.24
VRK1Q99986 GPN1-201ENST00000264718 2496 ntAPPRIS P2 TSL 1 (best) BASIC13.56□□□□□ -0.24
VRK1Q99986 AC005840.4-201ENST00000541242 2494 ntBASIC13.56□□□□□ -0.24
VRK1Q99986 TRIM29-210ENST00000528870 2217 ntTSL 2 BASIC13.56□□□□□ -0.24
VRK1Q99986 MMADHC-203ENST00000428879 1726 ntAPPRIS P1 TSL 2 BASIC13.56□□□□□ -0.24
VRK1Q99986 SLC22A7-203ENST00000372589 2549 ntAPPRIS ALT2 TSL 2 BASIC13.56□□□□□ -0.24
VRK1Q99986 MUM1-201ENST00000415183 2837 ntAPPRIS ALT2 TSL 1 (best) BASIC13.56□□□□□ -0.24
VRK1Q99986 API5-202ENST00000420461 2009 ntTSL 2 BASIC13.56□□□□□ -0.24
VRK1Q99986 FAM114A2-215ENST00000522858 3379 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
VRK1Q99986 CYP4F3-202ENST00000585846 2056 ntAPPRIS ALT1 TSL 1 (best) BASIC13.56□□□□□ -0.24
VRK1Q99986 ASTN2-206ENST00000361477 4001 ntTSL 5 BASIC13.56□□□□□ -0.24
VRK1Q99986 SRSF8-201ENST00000587424 4028 ntAPPRIS P1 BASIC13.56□□□□□ -0.24
VRK1Q99986 GABRG3-208ENST00000615808 10768 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
VRK1Q99986 PACSIN2-201ENST00000263246 3249 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
VRK1Q99986 STEAP2-201ENST00000287908 6873 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
VRK1Q99986 COCH-203ENST00000460581 2688 ntTSL 2 BASIC13.56□□□□□ -0.24
VRK1Q99986 H2BFWT-201ENST00000217926 894 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
VRK1Q99986 C12orf10-201ENST00000267103 1192 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
VRK1Q99986 SLC18B1-202ENST00000367918 472 ntTSL 5 BASIC13.56□□□□□ -0.24
VRK1Q99986 ADIRF-201ENST00000372013 917 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
VRK1Q99986 STK40-202ENST00000373129 3846 ntAPPRIS P3 TSL 1 (best) BASIC13.56□□□□□ -0.24
VRK1Q99986 PIR-201ENST00000380420 1282 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
VRK1Q99986 NUDT1-205ENST00000397048 783 ntTSL 1 (best) BASIC13.56□□□□□ -0.24
VRK1Q99986 RAC2-203ENST00000405484 842 ntAPPRIS ALT1 TSL 3 BASIC13.56□□□□□ -0.24
VRK1Q99986 AZGP1P1-201ENST00000411909 902 ntBASIC13.56□□□□□ -0.24
VRK1Q99986 HEBP2-202ENST00000448741 661 ntTSL 5 BASIC13.56□□□□□ -0.24
VRK1Q99986 AL589987.1-201ENST00000453380 819 ntBASIC13.56□□□□□ -0.24
VRK1Q99986 AC008378.1-201ENST00000521251 496 ntTSL 5 BASIC13.56□□□□□ -0.24
VRK1Q99986 SCN4B-204ENST00000529878 566 ntTSL 4 BASIC13.56□□□□□ -0.24
VRK1Q99986 IFITM2-204ENST00000533141 588 ntAPPRIS ALT2 TSL 4 BASIC13.56□□□□□ -0.24
VRK1Q99986 AC233702.7-201ENST00000536958 924 ntTSL 5 BASIC13.56□□□□□ -0.24
VRK1Q99986 YPEL2-205ENST00000585166 881 ntAPPRIS P1 TSL 5 BASIC13.56□□□□□ -0.24
VRK1Q99986 AC138474.1-201ENST00000586630 523 ntTSL 3 BASIC13.56□□□□□ -0.24
VRK1Q99986 AC004790.1-201ENST00000612686 536 ntBASIC13.56□□□□□ -0.24
VRK1Q99986 HIST1H2BO-201ENST00000616182 381 ntAPPRIS P1 BASIC13.56□□□□□ -0.24
VRK1Q99986 ZNF655-225ENST00000626122 705 ntTSL 5 BASIC13.56□□□□□ -0.24
VRK1Q99986 PLPP3-201ENST00000371250 3292 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
VRK1Q99986 BNIP3P1-202ENST00000550043 1585 ntBASIC13.56□□□□□ -0.24
VRK1Q99986 TIPRL-202ENST00000367833 3032 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
VRK1Q99986 NTNG1-208ENST00000370074 3048 ntTSL 1 (best) BASIC13.56□□□□□ -0.24
VRK1Q99986 GLMP-214ENST00000614643 1851 ntAPPRIS ALT2 TSL 2 BASIC13.56□□□□□ -0.24
VRK1Q99986 SPHK2-202ENST00000340932 2492 ntTSL 5 BASIC13.56□□□□□ -0.24
VRK1Q99986 GRK6-203ENST00000393576 2792 ntTSL 5 BASIC13.56□□□□□ -0.24
VRK1Q99986 NFIC-206ENST00000589123 8068 ntTSL 1 (best) BASIC13.56□□□□□ -0.24
VRK1Q99986 KLC4-204ENST00000453940 1945 ntTSL 2 BASIC13.56□□□□□ -0.24
VRK1Q99986 ETV5-206ENST00000434744 2213 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
VRK1Q99986 BVES-201ENST00000314641 5567 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
VRK1Q99986 MAP3K4-201ENST00000348824 5295 ntAPPRIS ALT2 TSL 5 BASIC13.56□□□□□ -0.24
VRK1Q99986 AL137784.3-201ENST00000623858 2288 ntBASIC13.56□□□□□ -0.24
VRK1Q99986 AL035685.1-202ENST00000637341 1688 ntTSL 5 BASIC13.56□□□□□ -0.24
VRK1Q99986 PITPNM1-216ENST00000534749 4189 ntAPPRIS P3 TSL 1 (best) BASIC13.56□□□□□ -0.24
VRK1Q99986 DBF4-201ENST00000265728 3907 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
VRK1Q99986 LPO-210ENST00000582328 2680 ntAPPRIS ALT2 TSL 5 BASIC13.56□□□□□ -0.24
VRK1Q99986 KIFC3-207ENST00000543930 3018 ntTSL 2 BASIC13.56□□□□□ -0.24
VRK1Q99986 KCNK4-TEX40-201ENST00000539086 2733 ntTSL 1 (best) BASIC13.55□□□□□ -0.24
VRK1Q99986 CRYM-201ENST00000219599 1471 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
VRK1Q99986 FSIP1-201ENST00000350221 2805 ntAPPRIS P2 TSL 1 (best) BASIC13.55□□□□□ -0.24
VRK1Q99986 DTX3-202ENST00000548198 3199 ntAPPRIS P3 TSL 2 BASIC13.55□□□□□ -0.24
VRK1Q99986 TM6SF2-201ENST00000389363 1505 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
VRK1Q99986 ZBTB45P2-201ENST00000452245 1531 ntBASIC13.55□□□□□ -0.24
VRK1Q99986 SPDEF-202ENST00000544425 1866 ntAPPRIS ALT1 TSL 2 BASIC13.55□□□□□ -0.24
VRK1Q99986 COLEC11-209ENST00000418971 1595 ntTSL 2 BASIC13.55□□□□□ -0.24
VRK1Q99986 SYNRG-217ENST00000612223 8229 ntAPPRIS P4 TSL 1 (best) BASIC13.55□□□□□ -0.24
VRK1Q99986 LARGE1-201ENST00000354992 4409 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
VRK1Q99986 FBXO42-201ENST00000375592 6202 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
VRK1Q99986 ELF2-202ENST00000379549 3005 ntTSL 2 BASIC13.55□□□□□ -0.24
VRK1Q99986 MPPED2-202ENST00000448418 5591 ntTSL 1 (best) BASIC13.55□□□□□ -0.24
VRK1Q99986 FLI1-201ENST00000281428 4151 ntTSL 1 (best) BASIC13.55□□□□□ -0.24
VRK1Q99986 THOC7-201ENST00000295899 990 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
VRK1Q99986 LYPLA2-201ENST00000374501 1117 ntTSL 2 BASIC13.55□□□□□ -0.24
VRK1Q99986 COX5BP8-201ENST00000416911 349 ntBASIC13.55□□□□□ -0.24
VRK1Q99986 TMEM247-204ENST00000434431 680 ntAPPRIS P1 TSL 5 BASIC13.55□□□□□ -0.24
VRK1Q99986 HIST3H2BA-201ENST00000436555 524 ntBASIC13.55□□□□□ -0.24
VRK1Q99986 MYCLP2-201ENST00000449268 967 ntBASIC13.55□□□□□ -0.24
VRK1Q99986 RAB3A-202ENST00000464076 1253 ntTSL 2 BASIC13.55□□□□□ -0.24
VRK1Q99986 AC011495.1-201ENST00000498085 584 ntBASIC13.55□□□□□ -0.24
VRK1Q99986 AC104596.2-201ENST00000512793 793 ntBASIC13.55□□□□□ -0.24
VRK1Q99986 SERF1B-208ENST00000515588 792 ntTSL 2 BASIC13.55□□□□□ -0.24
VRK1Q99986 RAB1B-202ENST00000527397 991 ntTSL 3 BASIC13.55□□□□□ -0.24
Retrieved 100 of 98,524 protein–RNA pairs in 32.1 ms