Protein–RNA interactions for Protein: Q96RW7

HMCN1, Hemicentin-1, humanhuman

Predictions only

Length 5,635 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HMCN1Q96RW7 AC004803.1-202ENST00000545629 569 ntTSL 3 BASIC4.43□□□□□ -1.7
HMCN1Q96RW7 AC004801.1-201ENST00000549557 360 ntBASIC4.43□□□□□ -1.7
HMCN1Q96RW7 AC134312.5-202ENST00000562705 756 ntTSL 3 BASIC4.43□□□□□ -1.7
HMCN1Q96RW7 EIF5A-207ENST00000572815 811 ntTSL 5 BASIC4.43□□□□□ -1.7
HMCN1Q96RW7 MIR3194-201ENST00000582236 73 ntBASIC4.43□□□□□ -1.7
HMCN1Q96RW7 AC138150.1-201ENST00000589950 570 ntTSL 4 BASIC4.43□□□□□ -1.7
HMCN1Q96RW7 AL450472.2-201ENST00000603663 1156 ntBASIC4.43□□□□□ -1.7
HMCN1Q96RW7 AC007378.1-201ENST00000609765 478 ntBASIC4.43□□□□□ -1.7
HMCN1Q96RW7 BX510359.7-201ENST00000619819 630 ntBASIC4.43□□□□□ -1.7
HMCN1Q96RW7 EFHC1-227ENST00000637089 2133 ntTSL 5 BASIC4.43□□□□□ -1.7
HMCN1Q96RW7 ANKRD36BP1-201ENST00000358576 1779 ntBASIC4.43□□□□□ -1.7
HMCN1Q96RW7 PITPNM2-209ENST00000546049 1793 ntTSL 5 BASIC4.43□□□□□ -1.7
HMCN1Q96RW7 PTPRJ-202ENST00000440289 3158 ntTSL 1 (best) BASIC4.43□□□□□ -1.7
HMCN1Q96RW7 TTYH2-206ENST00000529107 2015 ntTSL 2 BASIC4.43□□□□□ -1.7
HMCN1Q96RW7 LILRP1-201ENST00000444199 1370 ntBASIC4.43□□□□□ -1.7
HMCN1Q96RW7 ELP4-223ENST00000640342 1392 ntTSL 5 BASIC4.43□□□□□ -1.7
HMCN1Q96RW7 PRSS36-201ENST00000268281 2840 ntAPPRIS P3 TSL 1 (best) BASIC4.43□□□□□ -1.7
HMCN1Q96RW7 AC015813.5-201ENST00000624641 1514 ntBASIC4.43□□□□□ -1.7
HMCN1Q96RW7 SCNN1A-205ENST00000396966 2336 ntTSL 3 BASIC4.43□□□□□ -1.7
HMCN1Q96RW7 TAF1C-222ENST00000570117 2349 ntAPPRIS ALT2 TSL 2 BASIC4.43□□□□□ -1.7
HMCN1Q96RW7 SGK2-206ENST00000423407 1915 ntAPPRIS P1 TSL 1 (best) BASIC4.43□□□□□ -1.7
HMCN1Q96RW7 KMT2E-207ENST00000476671 2523 ntTSL 1 (best) BASIC4.43□□□□□ -1.7
HMCN1Q96RW7 ZBTB10-205ENST00000610895 2833 ntAPPRIS ALT2 TSL 2 BASIC4.43□□□□□ -1.7
HMCN1Q96RW7 OR51B5-201ENST00000300773 939 ntAPPRIS P1 BASIC4.43□□□□□ -1.7
HMCN1Q96RW7 AL591499.1-201ENST00000307155 1153 ntBASIC4.43□□□□□ -1.7
HMCN1Q96RW7 AC074366.1-204ENST00000446277 552 ntTSL 3 BASIC4.43□□□□□ -1.7
HMCN1Q96RW7 CR383656.13-201ENST00000550928 563 ntTSL 3 BASIC4.43□□□□□ -1.7
HMCN1Q96RW7 AL391152.1-202ENST00000551408 624 ntTSL 3 BASIC4.43□□□□□ -1.7
HMCN1Q96RW7 AL512310.10-201ENST00000555580 563 ntTSL 3 BASIC4.43□□□□□ -1.7
HMCN1Q96RW7 AL352977.2-201ENST00000557101 547 ntTSL 4 BASIC4.43□□□□□ -1.7
HMCN1Q96RW7 CASC15-202ENST00000561912 1449 ntTSL 5 BASIC4.43□□□□□ -1.7
HMCN1Q96RW7 BMS1P8-203ENST00000567036 614 ntTSL 3 BASIC4.43□□□□□ -1.7
HMCN1Q96RW7 KLF3-AS1-207ENST00000620339 558 ntTSL 4 BASIC4.43□□□□□ -1.7
HMCN1Q96RW7 RBCK1-215ENST00000640614 2599 ntTSL 5 BASIC4.43□□□□□ -1.7
HMCN1Q96RW7 BECN1-201ENST00000361523 2112 ntAPPRIS P1 TSL 1 (best) BASIC4.43□□□□□ -1.7
HMCN1Q96RW7 ZBTB11-202ENST00000461821 2115 ntTSL 1 (best) BASIC4.43□□□□□ -1.7
HMCN1Q96RW7 ADGRB2-204ENST00000398542 5176 ntTSL 5 BASIC4.43□□□□□ -1.7
HMCN1Q96RW7 KCNN3-202ENST00000358505 1658 ntTSL 1 (best) BASIC4.43□□□□□ -1.7
HMCN1Q96RW7 TUBA3C-202ENST00000618094 1386 ntTSL 1 (best) BASIC4.43□□□□□ -1.7
HMCN1Q96RW7 NOMO2-210ENST00000620440 1360 ntTSL 5 BASIC4.43□□□□□ -1.7
HMCN1Q96RW7 CROCCP2-202ENST00000412962 2773 ntBASIC4.43□□□□□ -1.7
HMCN1Q96RW7 CBS-203ENST00000398158 2453 ntAPPRIS P1 TSL 1 (best) BASIC4.43□□□□□ -1.7
HMCN1Q96RW7 CBSL-206ENST00000624406 2453 ntAPPRIS P1 TSL 1 (best) BASIC4.43□□□□□ -1.7
HMCN1Q96RW7 IGFBP3-203ENST00000381086 2322 ntTSL 2 BASIC4.43□□□□□ -1.7
HMCN1Q96RW7 ALDOA-226ENST00000569798 1499 ntTSL 2 BASIC4.43□□□□□ -1.7
HMCN1Q96RW7 TFEB-206ENST00000403298 2162 ntAPPRIS P1 TSL 5 BASIC4.43□□□□□ -1.7
HMCN1Q96RW7 AGAP6-201ENST00000374056 2703 ntAPPRIS ALT2 TSL 1 (best) BASIC4.43□□□□□ -1.7
HMCN1Q96RW7 HENMT1-202ENST00000370032 1874 ntAPPRIS P2 TSL 1 (best) BASIC4.43□□□□□ -1.7
HMCN1Q96RW7 AC237221.1-201ENST00000561575 1881 ntTSL 1 (best) BASIC4.43□□□□□ -1.7
HMCN1Q96RW7 FNDC11-204ENST00000615526 2954 ntAPPRIS P1 BASIC4.43□□□□□ -1.7
HMCN1Q96RW7 AAAS-202ENST00000394384 1703 ntTSL 1 (best) BASIC4.43□□□□□ -1.7
HMCN1Q96RW7 AC003002.1-202ENST00000596755 1743 ntAPPRIS P1 BASIC4.43□□□□□ -1.7
HMCN1Q96RW7 ZBTB22-208ENST00000431845 2651 ntAPPRIS P1 TSL 1 (best) BASIC4.43□□□□□ -1.7
HMCN1Q96RW7 ZNF133-212ENST00000622607 2660 ntAPPRIS ALT2 TSL 4 BASIC4.43□□□□□ -1.7
HMCN1Q96RW7 RCAN3-210ENST00000618490 2386 ntTSL 1 (best) BASIC4.43□□□□□ -1.7
HMCN1Q96RW7 MADD-208ENST00000405573 1823 ntTSL 5 BASIC4.43□□□□□ -1.7
HMCN1Q96RW7 RIPPLY2-201ENST00000369687 521 ntAPPRIS ALT2 TSL 2 BASIC4.43□□□□□ -1.7
HMCN1Q96RW7 LINC01128-201ENST00000415295 894 ntTSL 1 (best) BASIC4.43□□□□□ -1.7
HMCN1Q96RW7 MRPS16P3-201ENST00000415961 374 ntBASIC4.43□□□□□ -1.7
HMCN1Q96RW7 AC017081.1-201ENST00000420063 823 ntBASIC4.43□□□□□ -1.7
HMCN1Q96RW7 KCNK15-AS1-203ENST00000427598 862 ntTSL 2 BASIC4.43□□□□□ -1.7
HMCN1Q96RW7 AC016735.1-201ENST00000457457 237 ntTSL 2 BASIC4.43□□□□□ -1.7
HMCN1Q96RW7 TSHR-205ENST00000554263 1184 ntTSL 1 (best) BASIC4.43□□□□□ -1.7
HMCN1Q96RW7 NPIPB11-202ENST00000614927 1216 ntTSL 5 BASIC4.43□□□□□ -1.7
HMCN1Q96RW7 LINC00869-208ENST00000621156 737 ntTSL 1 (best) BASIC4.43□□□□□ -1.7
HMCN1Q96RW7 AC126755.5-201ENST00000622756 267 ntBASIC4.43□□□□□ -1.7
HMCN1Q96RW7 AC092611.3-201ENST00000624858 718 ntBASIC4.43□□□□□ -1.7
HMCN1Q96RW7 REM1-201ENST00000201979 1665 ntAPPRIS P1 TSL 1 (best) BASIC4.43□□□□□ -1.7
HMCN1Q96RW7 CRISPLD2-203ENST00000564567 1651 ntTSL 1 (best) BASIC4.43□□□□□ -1.7
HMCN1Q96RW7 LEMD2-214ENST00000614475 2883 ntAPPRIS P1 TSL 5 BASIC4.43□□□□□ -1.7
HMCN1Q96RW7 ZNF598-204ENST00000563630 3371 ntAPPRIS P1 TSL 1 (best) BASIC4.43□□□□□ -1.7
HMCN1Q96RW7 ABCB9-207ENST00000442833 2587 ntTSL 1 (best) BASIC4.43□□□□□ -1.7
HMCN1Q96RW7 KLHL36-204ENST00000564996 2173 ntAPPRIS P1 TSL 1 (best) BASIC4.43□□□□□ -1.7
HMCN1Q96RW7 AKAP9-205ENST00000394564 1356 ntTSL 1 (best) BASIC4.43□□□□□ -1.7
HMCN1Q96RW7 P2RX5-207ENST00000551178 1863 ntTSL 1 (best) BASIC4.43□□□□□ -1.7
HMCN1Q96RW7 DZIP1L-204ENST00000469243 2107 ntAPPRIS ALT2 TSL 2 BASIC4.43□□□□□ -1.7
HMCN1Q96RW7 TSG101-204ENST00000536719 2101 ntTSL 5 BASIC4.43□□□□□ -1.7
HMCN1Q96RW7 ELP5-214ENST00000574993 2209 ntTSL 1 (best) BASIC4.43□□□□□ -1.7
HMCN1Q96RW7 EXT2-202ENST00000358681 2997 ntTSL 1 (best) BASIC4.43□□□□□ -1.7
HMCN1Q96RW7 AC083837.1-201ENST00000565297 2994 ntBASIC4.43□□□□□ -1.7
HMCN1Q96RW7 PITX2-205ENST00000394598 1906 ntAPPRIS ALT1 TSL 1 (best) BASIC4.43□□□□□ -1.7
HMCN1Q96RW7 OTUD6A-201ENST00000338352 1689 ntAPPRIS P1 BASIC4.43□□□□□ -1.7
HMCN1Q96RW7 SPIB-201ENST00000270632 1443 ntTSL 1 (best) BASIC4.43□□□□□ -1.7
HMCN1Q96RW7 FAM129C-202ENST00000335393 2508 ntAPPRIS P3 TSL 1 (best) BASIC4.43□□□□□ -1.7
HMCN1Q96RW7 NAGK-208ENST00000455662 1778 ntTSL 1 (best) BASIC4.43□□□□□ -1.7
HMCN1Q96RW7 KBTBD2-201ENST00000304056 3745 ntAPPRIS P1 TSL 1 (best) BASIC4.43□□□□□ -1.7
HMCN1Q96RW7 APOC3-201ENST00000227667 550 ntAPPRIS P1 TSL 1 (best) BASIC4.43□□□□□ -1.7
HMCN1Q96RW7 RBP1-201ENST00000232219 898 ntTSL 1 (best) BASIC4.43□□□□□ -1.7
HMCN1Q96RW7 AP001057.1-201ENST00000437557 799 ntTSL 5 BASIC4.43□□□□□ -1.7
HMCN1Q96RW7 RPL18AP2-201ENST00000450007 482 ntBASIC4.43□□□□□ -1.7
HMCN1Q96RW7 HKR1-220ENST00000591259 734 ntTSL 1 (best) BASIC4.43□□□□□ -1.7
HMCN1Q96RW7 USE1-207ENST00000596136 637 ntTSL 1 (best) BASIC4.43□□□□□ -1.7
HMCN1Q96RW7 AC010524.1-201ENST00000596488 494 ntTSL 3 BASIC4.43□□□□□ -1.7
HMCN1Q96RW7 RBP1-206ENST00000617459 667 ntTSL 2 BASIC4.43□□□□□ -1.7
HMCN1Q96RW7 MIR6880-201ENST00000622851 62 ntBASIC4.43□□□□□ -1.7
HMCN1Q96RW7 AC012594.1-273ENST00000626618 816 ntTSL 5 BASIC4.43□□□□□ -1.7
HMCN1Q96RW7 TBX4-201ENST00000240335 2470 ntAPPRIS P3 TSL 1 (best) BASIC4.43□□□□□ -1.7
HMCN1Q96RW7 TRPC1-203ENST00000476941 3061 ntAPPRIS ALT2 TSL 1 (best) BASIC4.43□□□□□ -1.7
HMCN1Q96RW7 GTF2A1L-201ENST00000403751 1639 ntAPPRIS P1 TSL 1 (best) BASIC4.43□□□□□ -1.7
HMCN1Q96RW7 PDE8B-203ENST00000340978 3426 ntTSL 1 (best) BASIC4.43□□□□□ -1.7
Retrieved 100 of 98,524 protein–RNA pairs in 35.8 ms