Protein–RNA interactions for Protein: Q96RF0

SNX18, Sorting nexin-18, humanhuman

Predictions only

Length 628 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNX18Q96RF0 MANBAL-204ENST00000397151 1503 ntAPPRIS P1 TSL 3 BASIC13.98□□□□□ -0.17
SNX18Q96RF0 MANBAL-205ENST00000397152 1539 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
SNX18Q96RF0 SOAT1-203ENST00000539888 6794 ntTSL 2 BASIC13.98□□□□□ -0.17
SNX18Q96RF0 CARD10-203ENST00000406271 3127 ntTSL 2 BASIC13.98□□□□□ -0.17
SNX18Q96RF0 BCS1L-212ENST00000439945 1483 ntAPPRIS P1 TSL 5 BASIC13.98□□□□□ -0.17
SNX18Q96RF0 ALDH3A2-226ENST00000631291 3822 ntTSL 5 BASIC13.98□□□□□ -0.17
SNX18Q96RF0 AC113189.2-201ENST00000575310 1975 ntTSL 2 BASIC13.98□□□□□ -0.17
SNX18Q96RF0 PXYLP1-201ENST00000286353 3281 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
SNX18Q96RF0 TNIP1-214ENST00000522226 2238 ntAPPRIS P3 TSL 2 BASIC13.98□□□□□ -0.17
SNX18Q96RF0 MATN3-202ENST00000421259 1443 ntAPPRIS ALT2 TSL 1 (best) BASIC13.98□□□□□ -0.17
SNX18Q96RF0 TIA1-206ENST00000445587 1440 ntTSL 5 BASIC13.98□□□□□ -0.17
SNX18Q96RF0 COQ8A-203ENST00000366779 5523 ntAPPRIS P1 TSL 2 BASIC13.98□□□□□ -0.17
SNX18Q96RF0 FGFR3-203ENST00000352904 3733 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
SNX18Q96RF0 HSPA7-201ENST00000445535 1927 ntBASIC13.98□□□□□ -0.17
SNX18Q96RF0 MARK4-202ENST00000300843 5209 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
SNX18Q96RF0 VIPR1-202ENST00000433647 3161 ntTSL 2 BASIC13.97□□□□□ -0.17
SNX18Q96RF0 RAB3IL1-201ENST00000301773 2125 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
SNX18Q96RF0 NMNAT3-202ENST00000339837 1863 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
SNX18Q96RF0 STRA6-205ENST00000432245 1889 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
SNX18Q96RF0 TMEM169-204ENST00000437356 1634 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
SNX18Q96RF0 WASH3P-207ENST00000560956 1394 ntBASIC13.97□□□□□ -0.17
SNX18Q96RF0 ANXA8-203ENST00000583874 1860 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
SNX18Q96RF0 FO538757.1-201ENST00000623083 1397 ntBASIC13.97□□□□□ -0.17
SNX18Q96RF0 ZCCHC7-209ENST00000534928 2828 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
SNX18Q96RF0 NFATC4-207ENST00000553469 2566 ntAPPRIS ALT2 TSL 1 (best) BASIC13.97□□□□□ -0.17
SNX18Q96RF0 DGAT2L6-201ENST00000333026 1553 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
SNX18Q96RF0 CEACAM16-201ENST00000405314 1583 ntAPPRIS P1 TSL 5 BASIC13.97□□□□□ -0.17
SNX18Q96RF0 GLIS2-202ENST00000433375 3705 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
SNX18Q96RF0 SLC29A1-204ENST00000371731 2258 ntAPPRIS P1 TSL 5 BASIC13.97□□□□□ -0.17
SNX18Q96RF0 MAPT-213ENST00000571987 2277 ntAPPRIS P4 TSL 5 BASIC13.97□□□□□ -0.17
SNX18Q96RF0 SPRY2-201ENST00000377102 2708 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
SNX18Q96RF0 NRP2-205ENST00000412873 2730 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
SNX18Q96RF0 BSG-204ENST00000545507 1795 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
SNX18Q96RF0 TNFSF13-201ENST00000338784 1971 ntAPPRIS P3 TSL 1 (best) BASIC13.97□□□□□ -0.17
SNX18Q96RF0 BAX-206ENST00000415969 540 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
SNX18Q96RF0 TARDBPP1-201ENST00000442013 1203 ntBASIC13.97□□□□□ -0.17
SNX18Q96RF0 AC125807.1-201ENST00000483097 614 ntBASIC13.97□□□□□ -0.17
SNX18Q96RF0 NRK-203ENST00000536164 908 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
SNX18Q96RF0 AC004803.1-204ENST00000543290 512 ntTSL 4 BASIC13.97□□□□□ -0.17
SNX18Q96RF0 AL079307.3-201ENST00000556114 283 ntBASIC13.97□□□□□ -0.17
SNX18Q96RF0 CERNA1-201ENST00000559779 908 ntTSL 3 BASIC13.97□□□□□ -0.17
SNX18Q96RF0 MIR6069-201ENST00000620069 79 ntBASIC13.97□□□□□ -0.17
SNX18Q96RF0 AQP12B-206ENST00000621682 1080 ntAPPRIS ALT2 TSL 5 BASIC13.97□□□□□ -0.17
SNX18Q96RF0 AC244153.1-203ENST00000622796 419 ntTSL 2 BASIC13.97□□□□□ -0.17
SNX18Q96RF0 RAPGEF4-201ENST00000397081 4299 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
SNX18Q96RF0 GPKOW-201ENST00000156109 1742 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
SNX18Q96RF0 AC068888.1-207ENST00000546793 2863 ntTSL 2 BASIC13.97□□□□□ -0.17
SNX18Q96RF0 GRAMD4-202ENST00000406902 4484 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
SNX18Q96RF0 SYT9-201ENST00000318881 3955 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
SNX18Q96RF0 AP3M2-201ENST00000174653 3661 ntAPPRIS P1 TSL 5 BASIC13.97□□□□□ -0.17
SNX18Q96RF0 OTOL1-201ENST00000327928 1434 ntAPPRIS P1 TSL 2 BASIC13.97□□□□□ -0.17
SNX18Q96RF0 BAG1-210ENST00000634734 3786 ntAPPRIS ALT2 TSL 1 (best) BASIC13.97□□□□□ -0.17
SNX18Q96RF0 C19orf57-204ENST00000586783 2454 ntAPPRIS ALT2 TSL 5 BASIC13.97□□□□□ -0.17
SNX18Q96RF0 CPA5-202ENST00000431780 1803 ntTSL 2 BASIC13.97□□□□□ -0.17
SNX18Q96RF0 PI4K2B-201ENST00000264864 3540 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
SNX18Q96RF0 TSSK3-201ENST00000373534 1368 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
SNX18Q96RF0 ITGB4-206ENST00000579662 5554 ntAPPRIS ALT2 TSL 1 (best) BASIC13.96□□□□□ -0.17
SNX18Q96RF0 RBM33-205ENST00000392759 1580 ntTSL 5 BASIC13.96□□□□□ -0.17
SNX18Q96RF0 AC023024.2-201ENST00000623561 1993 ntBASIC13.96□□□□□ -0.17
SNX18Q96RF0 TUBB3P1-201ENST00000405796 1332 ntBASIC13.96□□□□□ -0.17
SNX18Q96RF0 TSC1-202ENST00000403810 1507 ntTSL 1 (best) BASIC13.96□□□□□ -0.17
SNX18Q96RF0 AL359881.3-201ENST00000602640 1721 ntBASIC13.96□□□□□ -0.17
SNX18Q96RF0 PHKG1-210ENST00000537360 2139 ntAPPRIS ALT1 TSL 1 (best) BASIC13.96□□□□□ -0.17
SNX18Q96RF0 AC140479.7-201ENST00000636301 2332 ntBASIC13.96□□□□□ -0.17
SNX18Q96RF0 RASGEF1A-202ENST00000374459 3264 ntAPPRIS ALT2 TSL 2 BASIC13.96□□□□□ -0.17
SNX18Q96RF0 UBTF-205ENST00000526094 2459 ntTSL 5 BASIC13.96□□□□□ -0.17
SNX18Q96RF0 SNCAIP-207ENST00000504884 1885 ntTSL 1 (best) BASIC13.96□□□□□ -0.17
SNX18Q96RF0 RAPSN-201ENST00000298854 1671 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
SNX18Q96RF0 AC087386.2-201ENST00000623212 4637 ntBASIC13.96□□□□□ -0.17
SNX18Q96RF0 ERAS-201ENST00000338270 1266 ntAPPRIS P1 BASIC13.96□□□□□ -0.17
SNX18Q96RF0 ASMT-201ENST00000381229 1087 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
SNX18Q96RF0 AL513327.2-201ENST00000432703 490 ntTSL 2 BASIC13.96□□□□□ -0.17
SNX18Q96RF0 LINC01983-203ENST00000444346 519 ntTSL 2 BASIC13.96□□□□□ -0.17
SNX18Q96RF0 KLF2P3-201ENST00000451977 1087 ntBASIC13.96□□□□□ -0.17
SNX18Q96RF0 PTGES3-205ENST00000456859 957 ntTSL 2 BASIC13.96□□□□□ -0.17
SNX18Q96RF0 SERBP1P3-201ENST00000459980 809 ntBASIC13.96□□□□□ -0.17
SNX18Q96RF0 LHX6-205ENST00000464484 666 ntTSL 2 BASIC13.96□□□□□ -0.17
SNX18Q96RF0 SLED1-202ENST00000512051 380 ntBASIC13.96□□□□□ -0.17
SNX18Q96RF0 LINC01184-209ENST00000514573 609 ntTSL 3 BASIC13.96□□□□□ -0.17
SNX18Q96RF0 AC064807.1-203ENST00000520357 575 ntTSL 5 BASIC13.96□□□□□ -0.17
SNX18Q96RF0 HCFC1R1-203ENST00000572355 610 ntTSL 3 BASIC13.96□□□□□ -0.17
SNX18Q96RF0 HPSE2-205ENST00000614306 447 ntTSL 5 BASIC13.96□□□□□ -0.17
SNX18Q96RF0 CLN3-246ENST00000636228 1224 ntTSL 1 (best) BASIC13.96□□□□□ -0.17
SNX18Q96RF0 AL645728.2-202ENST00000641679 227 ntBASIC13.96□□□□□ -0.17
SNX18Q96RF0 CLASP2-203ENST00000359576 7141 ntAPPRIS P5 TSL 5 BASIC13.96□□□□□ -0.17
SNX18Q96RF0 PHLDA1-201ENST00000266671 8069 ntAPPRIS P2 TSL 1 (best) BASIC13.96□□□□□ -0.17
SNX18Q96RF0 IMPDH1-204ENST00000419067 2431 ntTSL 3 BASIC13.96□□□□□ -0.17
SNX18Q96RF0 AC004834.1-201ENST00000640784 2412 ntTSL 3 BASIC13.96□□□□□ -0.17
SNX18Q96RF0 AMIGO2-201ENST00000266581 3763 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
SNX18Q96RF0 ARFGAP1-212ENST00000519604 3191 ntTSL 2 BASIC13.96□□□□□ -0.17
SNX18Q96RF0 PGLYRP2-201ENST00000292609 2758 ntAPPRIS ALT2 TSL 1 (best) BASIC13.96□□□□□ -0.17
SNX18Q96RF0 MED12L-203ENST00000422248 2757 ntAPPRIS ALT2 TSL 2 BASIC13.96□□□□□ -0.17
SNX18Q96RF0 Z97205.2-201ENST00000564697 1639 ntBASIC13.96□□□□□ -0.17
SNX18Q96RF0 RPS6KA4-202ENST00000528057 3121 ntAPPRIS ALT1 TSL 1 (best) BASIC13.96□□□□□ -0.18
SNX18Q96RF0 OTULIN-201ENST00000284274 7800 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.18
SNX18Q96RF0 SPATC1-202ENST00000447830 1795 ntAPPRIS ALT2 TSL 1 (best) BASIC13.96□□□□□ -0.18
SNX18Q96RF0 TTC28-AS1-207ENST00000428584 5859 ntTSL 1 (best) BASIC13.96□□□□□ -0.18
SNX18Q96RF0 B3GALNT1-203ENST00000392781 3606 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.18
SNX18Q96RF0 DPEP1-201ENST00000261615 1592 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.18
SNX18Q96RF0 THOC5-203ENST00000397872 2676 ntAPPRIS P1 TSL 5 BASIC13.96□□□□□ -0.18
Retrieved 100 of 98,524 protein–RNA pairs in 59.8 ms