Protein–RNA interactions for Protein: Q96FN4

CPNE2, Copine-2, humanhuman

Predicted RBP Predictions only

Length 548 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE2Q96FN4 AC012508.2-201ENST00000567613 1472 ntBASIC13.34□□□□□ -0.27
CPNE2Q96FN4 BLK-201ENST00000259089 2606 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
CPNE2Q96FN4 CCDC90B-213ENST00000529611 1986 ntTSL 2 BASIC13.34□□□□□ -0.27
CPNE2Q96FN4 STRA6-218ENST00000574278 2455 ntTSL 2 BASIC13.34□□□□□ -0.27
CPNE2Q96FN4 PDZD3-212ENST00000531114 2996 ntTSL 2 BASIC13.34□□□□□ -0.27
CPNE2Q96FN4 UPF3B-202ENST00000345865 2335 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
CPNE2Q96FN4 FRMD5-209ENST00000484674 2319 ntTSL 2 BASIC13.34□□□□□ -0.27
CPNE2Q96FN4 SLC52A3-201ENST00000217254 2654 ntAPPRIS P1 TSL 5 BASIC13.34□□□□□ -0.27
CPNE2Q96FN4 SESN1-202ENST00000356644 2676 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
CPNE2Q96FN4 PRODH2-201ENST00000301175 1677 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
CPNE2Q96FN4 MAGEA12-201ENST00000357916 1664 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
CPNE2Q96FN4 TK1-203ENST00000588734 1681 ntTSL 2 BASIC13.34□□□□□ -0.27
CPNE2Q96FN4 FAM213A-205ENST00000606162 5859 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
CPNE2Q96FN4 TBC1D1-219ENST00000615497 2383 ntTSL 2 BASIC13.34□□□□□ -0.27
CPNE2Q96FN4 LIMS1-202ENST00000338045 1876 ntTSL 1 (best) BASIC13.33□□□□□ -0.27
CPNE2Q96FN4 SLC25A18-201ENST00000327451 2244 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.27
CPNE2Q96FN4 ARHGEF26-AS1-204ENST00000491862 2598 ntTSL 1 (best) BASIC13.33□□□□□ -0.27
CPNE2Q96FN4 AC092384.2-204ENST00000565053 2566 ntTSL 2 BASIC13.33□□□□□ -0.27
CPNE2Q96FN4 SLC38A9-202ENST00000396865 2927 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.27
CPNE2Q96FN4 CD6-201ENST00000313421 3252 ntAPPRIS P3 TSL 1 (best) BASIC13.33□□□□□ -0.27
CPNE2Q96FN4 ZCCHC17-202ENST00000373714 1730 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.27
CPNE2Q96FN4 SF3B4-201ENST00000271628 2085 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.27
CPNE2Q96FN4 WDR25-204ENST00000554175 2055 ntTSL 1 (best) BASIC13.33□□□□□ -0.27
CPNE2Q96FN4 MPLKIP-201ENST00000306984 7668 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
CPNE2Q96FN4 RBM33-205ENST00000392759 1580 ntTSL 5 BASIC13.33□□□□□ -0.28
CPNE2Q96FN4 PPIL6-202ENST00000424445 4031 ntTSL 5 BASIC13.33□□□□□ -0.28
CPNE2Q96FN4 E2F7-202ENST00000416496 5297 ntTSL 5 BASIC13.33□□□□□ -0.28
CPNE2Q96FN4 FAM13B-201ENST00000033079 5465 ntAPPRIS P3 TSL 1 (best) BASIC13.33□□□□□ -0.28
CPNE2Q96FN4 USP37-202ENST00000338465 1771 ntTSL 1 (best) BASIC13.33□□□□□ -0.28
CPNE2Q96FN4 NAPA-AS1-201ENST00000593284 1753 ntTSL 2 BASIC13.33□□□□□ -0.28
CPNE2Q96FN4 AMBP-201ENST00000265132 1434 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
CPNE2Q96FN4 TIA1-206ENST00000445587 1440 ntTSL 5 BASIC13.33□□□□□ -0.28
CPNE2Q96FN4 MRC2-202ENST00000446119 3201 ntTSL 2 BASIC13.33□□□□□ -0.28
CPNE2Q96FN4 COL9A2-202ENST00000372748 2862 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
CPNE2Q96FN4 AL356275.1-201ENST00000638446 7440 ntTSL 5 BASIC13.33□□□□□ -0.28
CPNE2Q96FN4 ISCA1-201ENST00000311534 813 ntTSL 2 BASIC13.33□□□□□ -0.28
CPNE2Q96FN4 STOML1-203ENST00000359750 984 ntTSL 1 (best) BASIC13.33□□□□□ -0.28
CPNE2Q96FN4 PRUNE2-202ENST00000376713 1069 ntTSL 5 BASIC13.33□□□□□ -0.28
CPNE2Q96FN4 TSSC4-202ENST00000380992 992 ntAPPRIS ALT2 TSL 5 BASIC13.33□□□□□ -0.28
CPNE2Q96FN4 CD81-202ENST00000381036 880 ntTSL 3 BASIC13.33□□□□□ -0.28
CPNE2Q96FN4 MIR574-201ENST00000385209 96 ntBASIC13.33□□□□□ -0.28
CPNE2Q96FN4 COA5-202ENST00000409997 557 ntTSL 4 BASIC13.33□□□□□ -0.28
CPNE2Q96FN4 C2orf49-202ENST00000410049 854 ntTSL 1 (best) BASIC13.33□□□□□ -0.28
CPNE2Q96FN4 AFG3L1P-209ENST00000429663 458 ntTSL 3 BASIC13.33□□□□□ -0.28
CPNE2Q96FN4 AL133481.1-201ENST00000438554 511 ntTSL 5 BASIC13.33□□□□□ -0.28
CPNE2Q96FN4 TARDBPP1-201ENST00000442013 1203 ntBASIC13.33□□□□□ -0.28
CPNE2Q96FN4 AC096536.1-201ENST00000443284 440 ntTSL 2 BASIC13.33□□□□□ -0.28
CPNE2Q96FN4 AL359764.1-201ENST00000444330 504 ntTSL 3 BASIC13.33□□□□□ -0.28
CPNE2Q96FN4 AC026191.1-201ENST00000491930 829 ntTSL 3 BASIC13.33□□□□□ -0.28
CPNE2Q96FN4 YBX1P5-201ENST00000509441 847 ntBASIC13.33□□□□□ -0.28
CPNE2Q96FN4 BANF1P1-201ENST00000553684 263 ntBASIC13.33□□□□□ -0.28
CPNE2Q96FN4 CCDC85C-204ENST00000555822 930 ntTSL 5 BASIC13.33□□□□□ -0.28
CPNE2Q96FN4 COX5A-203ENST00000564811 568 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
CPNE2Q96FN4 RAMP2-205ENST00000589683 858 ntTSL 3 BASIC13.33□□□□□ -0.28
CPNE2Q96FN4 TMEM179-205ENST00000615704 636 ntTSL 2 BASIC13.33□□□□□ -0.28
CPNE2Q96FN4 AQP12B-206ENST00000621682 1080 ntAPPRIS ALT2 TSL 5 BASIC13.33□□□□□ -0.28
CPNE2Q96FN4 GRM7-203ENST00000389336 2901 ntAPPRIS ALT1 TSL 1 (best) BASIC13.33□□□□□ -0.28
CPNE2Q96FN4 PIGT-246ENST00000639499 2021 ntTSL 5 BASIC13.33□□□□□ -0.28
CPNE2Q96FN4 HMGA1-204ENST00000401473 1887 ntAPPRIS ALT1 TSL 1 (best) BASIC13.33□□□□□ -0.28
CPNE2Q96FN4 B3GNT3-202ENST00000595387 1349 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
CPNE2Q96FN4 ZNF575-202ENST00000458714 2285 ntTSL 2 BASIC13.33□□□□□ -0.28
CPNE2Q96FN4 PRPF8-205ENST00000572621 7445 ntAPPRIS P1 TSL 5 BASIC13.33□□□□□ -0.28
CPNE2Q96FN4 PEX11B-201ENST00000369306 1740 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
CPNE2Q96FN4 TMCO3-202ENST00000434316 3050 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
CPNE2Q96FN4 COL20A1-203ENST00000422202 8097 ntAPPRIS ALT2 TSL 5 BASIC13.33□□□□□ -0.28
CPNE2Q96FN4 GPANK1-203ENST00000375896 1910 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
CPNE2Q96FN4 CNN3-207ENST00000545882 1902 ntTSL 2 BASIC13.33□□□□□ -0.28
CPNE2Q96FN4 MGLL-201ENST00000265052 4642 ntTSL 1 (best) BASIC13.33□□□□□ -0.28
CPNE2Q96FN4 KIF1BP-214ENST00000638119 2537 ntTSL 5 BASIC13.33□□□□□ -0.28
CPNE2Q96FN4 HSD17B4-206ENST00000504811 2740 ntTSL 2 BASIC13.33□□□□□ -0.28
CPNE2Q96FN4 PAG1-201ENST00000220597 10744 ntAPPRIS P1 TSL 2 BASIC13.33□□□□□ -0.28
CPNE2Q96FN4 TCOF1-202ENST00000377797 5095 ntAPPRIS ALT2 TSL 5 BASIC13.33□□□□□ -0.28
CPNE2Q96FN4 CCDC88A-204ENST00000413716 9586 ntTSL 1 (best) BASIC13.33□□□□□ -0.28
CPNE2Q96FN4 DNAJC7-202ENST00000426588 1774 ntTSL 2 BASIC13.32□□□□□ -0.28
CPNE2Q96FN4 TBRG4-215ENST00000494076 2190 ntAPPRIS P1 TSL 2 BASIC13.32□□□□□ -0.28
CPNE2Q96FN4 ZNF18-201ENST00000322748 2767 ntAPPRIS P3 TSL 2 BASIC13.32□□□□□ -0.28
CPNE2Q96FN4 NFATC4-219ENST00000555167 4364 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
CPNE2Q96FN4 ADAM11-201ENST00000200557 4571 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
CPNE2Q96FN4 FGFR1-201ENST00000326324 3816 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
CPNE2Q96FN4 FGFR1-204ENST00000356207 3824 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
CPNE2Q96FN4 ALDH3A2-226ENST00000631291 3822 ntTSL 5 BASIC13.32□□□□□ -0.28
CPNE2Q96FN4 DHCR7-202ENST00000407721 2601 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
CPNE2Q96FN4 GREM1-202ENST00000560830 2648 ntTSL 2 BASIC13.32□□□□□ -0.28
CPNE2Q96FN4 IL21R-AS1-201ENST00000563191 2615 ntTSL 2 BASIC13.32□□□□□ -0.28
CPNE2Q96FN4 ANKLE2-210ENST00000542657 2446 ntTSL 2 BASIC13.32□□□□□ -0.28
CPNE2Q96FN4 TTC29-208ENST00000513335 2226 ntAPPRIS ALT2 TSL 2 BASIC13.32□□□□□ -0.28
CPNE2Q96FN4 COPS3-201ENST00000268717 1641 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
CPNE2Q96FN4 OTOL1-201ENST00000327928 1434 ntAPPRIS P1 TSL 2 BASIC13.32□□□□□ -0.28
CPNE2Q96FN4 MAGIX-208ENST00000616266 3295 ntAPPRIS ALT2 TSL 5 BASIC13.32□□□□□ -0.28
CPNE2Q96FN4 OR10AC1-201ENST00000439431 2898 ntAPPRIS P1 BASIC13.32□□□□□ -0.28
CPNE2Q96FN4 AC041040.2-201ENST00000622926 2899 ntBASIC13.32□□□□□ -0.28
CPNE2Q96FN4 GCFC2-211ENST00000541687 4318 ntTSL 2 BASIC13.32□□□□□ -0.28
CPNE2Q96FN4 ARHGAP45-206ENST00000586866 4120 ntAPPRIS ALT2 TSL 1 (best) BASIC13.32□□□□□ -0.28
CPNE2Q96FN4 LGALSL-201ENST00000238875 3926 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
CPNE2Q96FN4 SYNGR1-203ENST00000328933 4391 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
CPNE2Q96FN4 FADS2-210ENST00000522056 1689 ntTSL 2 BASIC13.32□□□□□ -0.28
CPNE2Q96FN4 RSPH9-201ENST00000372163 2534 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
CPNE2Q96FN4 SLC22A7-203ENST00000372589 2549 ntAPPRIS ALT2 TSL 2 BASIC13.32□□□□□ -0.28
CPNE2Q96FN4 FHL2-201ENST00000322142 1462 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
CPNE2Q96FN4 DDX20-201ENST00000369702 4212 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Retrieved 100 of 98,524 protein–RNA pairs in 71.4 ms