Protein–RNA interactions for Protein: Q96C10

DHX58, Probable ATP-dependent RNA helicase DHX58, humanhuman

Predictions only

Length 678 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DHX58Q96C10 NKIRAS1-203ENST00000415901 1644 ntAPPRIS ALT1 TSL 5 BASIC17.23■□□□□ 0.35
DHX58Q96C10 PSMB6-201ENST00000270586 852 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
DHX58Q96C10 CABP5-201ENST00000293255 1257 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
DHX58Q96C10 TSPAN4-201ENST00000346501 882 ntTSL 3 BASIC17.23■□□□□ 0.35
DHX58Q96C10 LRP5L-201ENST00000402785 1193 ntAPPRIS P2 TSL 1 (best) BASIC17.23■□□□□ 0.35
DHX58Q96C10 AL627443.1-201ENST00000456477 1035 ntTSL 3 BASIC17.23■□□□□ 0.35
DHX58Q96C10 AC092183.1-201ENST00000469884 875 ntBASIC17.23■□□□□ 0.35
DHX58Q96C10 AC004066.1-201ENST00000502488 802 ntBASIC17.23■□□□□ 0.35
DHX58Q96C10 AC021491.2-201ENST00000513017 607 ntTSL 3 BASIC17.23■□□□□ 0.35
DHX58Q96C10 AC113383.1-201ENST00000514696 582 ntTSL 4 BASIC17.23■□□□□ 0.35
DHX58Q96C10 DOC2GP-202ENST00000514950 1163 ntBASIC17.23■□□□□ 0.35
DHX58Q96C10 RFPL4AP1-201ENST00000530883 850 ntBASIC17.23■□□□□ 0.35
DHX58Q96C10 TPRX2P-201ENST00000535362 881 ntBASIC17.23■□□□□ 0.35
DHX58Q96C10 RARRES2P5-201ENST00000564013 466 ntBASIC17.23■□□□□ 0.35
DHX58Q96C10 COMMD4-217ENST00000567195 677 ntTSL 2 BASIC17.23■□□□□ 0.35
DHX58Q96C10 AC036164.1-201ENST00000570544 333 ntBASIC17.23■□□□□ 0.35
DHX58Q96C10 PSMB6-205ENST00000614486 871 ntTSL 2 BASIC17.23■□□□□ 0.35
DHX58Q96C10 AC243829.4-204ENST00000616926 1115 ntTSL 5 BASIC17.23■□□□□ 0.35
DHX58Q96C10 ORC5-208ENST00000626700 344 ntTSL 3 BASIC17.23■□□□□ 0.35
DHX58Q96C10 CYP4F11-202ENST00000326742 2877 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
DHX58Q96C10 LILRP1-201ENST00000444199 1370 ntBASIC17.23■□□□□ 0.35
DHX58Q96C10 OR2V1-205ENST00000642036 2609 ntAPPRIS P1 BASIC17.23■□□□□ 0.35
DHX58Q96C10 HM13-201ENST00000335574 1809 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
DHX58Q96C10 CLPTM1-202ENST00000541297 2732 ntTSL 2 BASIC17.23■□□□□ 0.35
DHX58Q96C10 MPP6-201ENST00000222644 8452 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
DHX58Q96C10 NSUN5P1-204ENST00000428392 1562 ntTSL 2 BASIC17.23■□□□□ 0.35
DHX58Q96C10 PLXDC1-201ENST00000315392 6252 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
DHX58Q96C10 AC015656.1-201ENST00000624209 3578 ntBASIC17.23■□□□□ 0.35
DHX58Q96C10 LINGO1-204ENST00000561030 2677 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
DHX58Q96C10 TRAPPC8-210ENST00000582513 3205 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
DHX58Q96C10 DIS3-202ENST00000377780 5232 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
DHX58Q96C10 LATS2-201ENST00000382592 5511 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
DHX58Q96C10 MBD1-212ENST00000585672 2532 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
DHX58Q96C10 FUNDC2-201ENST00000369498 6455 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
DHX58Q96C10 CBWD2-204ENST00000433343 1411 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
DHX58Q96C10 LINC01010-201ENST00000431422 2069 ntTSL 2 BASIC17.22■□□□□ 0.35
DHX58Q96C10 TMPRSS6-202ENST00000381792 3260 ntAPPRIS ALT2 TSL 5 BASIC17.22■□□□□ 0.35
DHX58Q96C10 PPFIBP1-216ENST00000545334 2805 ntTSL 2 BASIC17.22■□□□□ 0.35
DHX58Q96C10 MIOS-201ENST00000340080 3453 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
DHX58Q96C10 FBXO46-201ENST00000317683 3001 ntAPPRIS P1 TSL 2 BASIC17.22■□□□□ 0.35
DHX58Q96C10 PPL-205ENST00000590782 5845 ntAPPRIS ALT1 TSL 5 BASIC17.22■□□□□ 0.35
DHX58Q96C10 PIK3IP1-201ENST00000215912 2467 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
DHX58Q96C10 COMP-201ENST00000222271 2461 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
DHX58Q96C10 PIK3CD-206ENST00000536656 5483 ntTSL 5 BASIC17.22■□□□□ 0.35
DHX58Q96C10 PIK3CD-208ENST00000628140 5483 ntTSL 5 BASIC17.22■□□□□ 0.35
DHX58Q96C10 SCYL1-208ENST00000527009 2586 ntTSL 5 BASIC17.22■□□□□ 0.35
DHX58Q96C10 NEIL2-201ENST00000284503 2671 ntAPPRIS P1 TSL 2 BASIC17.22■□□□□ 0.35
DHX58Q96C10 STIP1-207ENST00000538945 1900 ntTSL 2 BASIC17.22■□□□□ 0.35
DHX58Q96C10 POLR2J-201ENST00000292614 932 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
DHX58Q96C10 SPDYE19P-201ENST00000338590 713 ntBASIC17.22■□□□□ 0.35
DHX58Q96C10 ATP1A1-AS1-202ENST00000369492 1011 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
DHX58Q96C10 FAM166B-201ENST00000399742 958 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
DHX58Q96C10 KCNQ1DN-201ENST00000441418 1093 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
DHX58Q96C10 ARHGEF26-AS1-201ENST00000467912 628 ntTSL 3 BASIC17.22■□□□□ 0.35
DHX58Q96C10 SLC35B4-204ENST00000470969 1033 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
DHX58Q96C10 SERF1B-208ENST00000515588 792 ntTSL 2 BASIC17.22■□□□□ 0.35
DHX58Q96C10 REEP4-207ENST00000523293 913 ntTSL 3 BASIC17.22■□□□□ 0.35
DHX58Q96C10 AC067930.5-201ENST00000531730 1173 ntTSL 2 BASIC17.22■□□□□ 0.35
DHX58Q96C10 RNF24-204ENST00000545616 1128 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
DHX58Q96C10 AC090825.1-203ENST00000558188 582 ntTSL 3 BASIC17.22■□□□□ 0.35
DHX58Q96C10 AC011499.1-201ENST00000586012 581 ntAPPRIS P1 TSL 3 BASIC17.22■□□□□ 0.35
DHX58Q96C10 INO80C-210ENST00000590757 595 ntTSL 2 BASIC17.22■□□□□ 0.35
DHX58Q96C10 CYP4F3-203ENST00000586182 2338 ntAPPRIS ALT1 TSL 2 BASIC17.22■□□□□ 0.35
DHX58Q96C10 TAF5-201ENST00000369839 3268 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
DHX58Q96C10 PRPF3-201ENST00000324862 2433 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
DHX58Q96C10 AC005912.2-201ENST00000619492 2400 ntBASIC17.22■□□□□ 0.35
DHX58Q96C10 PNPLA5-201ENST00000216177 2539 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
DHX58Q96C10 GLIPR1L2-204ENST00000550916 2609 ntAPPRIS ALT2 TSL 1 (best) BASIC17.22■□□□□ 0.35
DHX58Q96C10 AC007787.1-201ENST00000588095 1583 ntBASIC17.22■□□□□ 0.35
DHX58Q96C10 GEMIN7-201ENST00000270257 1657 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
DHX58Q96C10 PRKD2-206ENST00000595515 3012 ntTSL 2 BASIC17.22■□□□□ 0.35
DHX58Q96C10 ADPRHL1-201ENST00000356501 1877 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
DHX58Q96C10 SEMA5B-206ENST00000451055 4579 ntAPPRIS ALT2 TSL 2 BASIC17.22■□□□□ 0.35
DHX58Q96C10 RIMS1-216ENST00000521978 5079 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
DHX58Q96C10 TSEN2-205ENST00000444864 2697 ntTSL 2 BASIC17.22■□□□□ 0.35
DHX58Q96C10 SLC52A3-202ENST00000381944 3060 ntTSL 2 BASIC17.22■□□□□ 0.35
DHX58Q96C10 FCHSD2-204ENST00000409418 3154 ntAPPRIS P1 TSL 2 BASIC17.22■□□□□ 0.35
DHX58Q96C10 PXYLP1-201ENST00000286353 3281 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
DHX58Q96C10 NYAP1-201ENST00000300179 3581 ntAPPRIS P1 TSL 2 BASIC17.22■□□□□ 0.35
DHX58Q96C10 AL360270.3-201ENST00000609118 1348 ntBASIC17.21■□□□□ 0.35
DHX58Q96C10 DRD5P1-201ENST00000456605 1438 ntBASIC17.21■□□□□ 0.35
DHX58Q96C10 NR1H3-211ENST00000441012 1637 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
DHX58Q96C10 MLST8-201ENST00000301724 1735 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
DHX58Q96C10 PITX2-205ENST00000394598 1906 ntAPPRIS ALT1 TSL 1 (best) BASIC17.21■□□□□ 0.35
DHX58Q96C10 TRAK1-208ENST00000484786 2008 ntTSL 5 BASIC17.21■□□□□ 0.35
DHX58Q96C10 RIOX2-202ENST00000360258 2232 ntAPPRIS P3 TSL 1 (best) BASIC17.21■□□□□ 0.35
DHX58Q96C10 DMTN-203ENST00000381470 2601 ntTSL 5 BASIC17.21■□□□□ 0.35
DHX58Q96C10 SRSF5-203ENST00000553521 2815 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
DHX58Q96C10 C15orf52-206ENST00000559313 3022 ntAPPRIS P2 TSL 5 BASIC17.21■□□□□ 0.35
DHX58Q96C10 BIRC2-214ENST00000621637 3331 ntTSL 5 BASIC17.21■□□□□ 0.35
DHX58Q96C10 DNAJC5-201ENST00000360864 5213 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
DHX58Q96C10 SHROOM2-201ENST00000380913 7447 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
DHX58Q96C10 RNASEH1-201ENST00000315212 1887 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
DHX58Q96C10 TLX1NB-202ENST00000445873 1862 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
DHX58Q96C10 B3GNTL1-211ENST00000576599 1787 ntTSL 2 BASIC17.21■□□□□ 0.35
DHX58Q96C10 ZSWIM8-AS1-201ENST00000456638 1460 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
DHX58Q96C10 ING4-202ENST00000396807 1393 ntAPPRIS ALT1 TSL 1 (best) BASIC17.21■□□□□ 0.35
DHX58Q96C10 RABL2A-203ENST00000393166 1052 ntAPPRIS P3 TSL 1 (best) BASIC17.21■□□□□ 0.35
DHX58Q96C10 RHOG-203ENST00000396979 1289 ntAPPRIS P1 TSL 3 BASIC17.21■□□□□ 0.35
DHX58Q96C10 DSCR3-204ENST00000399001 821 ntTSL 2 BASIC17.21■□□□□ 0.35
Retrieved 100 of 98,524 protein–RNA pairs in 32.5 ms