Protein–RNA interactions for Protein: Q96BP2

CHCHD1, Coiled-coil-helix-coiled-coil-helix domain-containing protein 1, humanhuman

Known RBP Predictions only

Length 118 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHCHD1Q96BP2 L3MBTL1-206ENST00000427442 3157 ntAPPRIS ALT2 TSL 5 BASIC11.11□□□□□ -0.63
CHCHD1Q96BP2 AGAP5-201ENST00000374094 2394 ntAPPRIS P2 TSL 1 (best) BASIC11.11□□□□□ -0.63
CHCHD1Q96BP2 SYNE3-201ENST00000334258 3275 ntAPPRIS P2 TSL 1 (best) BASIC11.11□□□□□ -0.63
CHCHD1Q96BP2 CYTH2-203ENST00000427476 4606 ntAPPRIS ALT1 TSL 1 (best) BASIC11.11□□□□□ -0.63
CHCHD1Q96BP2 FUT3-201ENST00000303225 2584 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
CHCHD1Q96BP2 HSD17B4-215ENST00000510025 2589 ntTSL 2 BASIC11.11□□□□□ -0.63
CHCHD1Q96BP2 ADGRG6-202ENST00000296932 6849 ntTSL 1 (best) BASIC11.11□□□□□ -0.63
CHCHD1Q96BP2 ZNF519-206ENST00000589498 2117 ntTSL 2 BASIC11.11□□□□□ -0.63
CHCHD1Q96BP2 ILK-203ENST00000420936 1692 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
CHCHD1Q96BP2 SCLT1-209ENST00000511426 1696 ntAPPRIS ALT2 TSL 1 (best) BASIC11.11□□□□□ -0.63
CHCHD1Q96BP2 C1orf228-219ENST00000535358 1685 ntAPPRIS P2 TSL 5 BASIC11.11□□□□□ -0.63
CHCHD1Q96BP2 MCHR1-201ENST00000249016 2851 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
CHCHD1Q96BP2 MSI2-202ENST00000322684 1860 ntAPPRIS ALT2 TSL 2 BASIC11.1□□□□□ -0.63
CHCHD1Q96BP2 SGCE-202ENST00000415788 1871 ntTSL 2 BASIC11.1□□□□□ -0.63
CHCHD1Q96BP2 TMEM25-201ENST00000313236 2409 ntAPPRIS P3 TSL 1 (best) BASIC11.1□□□□□ -0.63
CHCHD1Q96BP2 AGL-203ENST00000361915 7368 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
CHCHD1Q96BP2 AL118506.1-201ENST00000601296 3082 ntBASIC11.1□□□□□ -0.63
CHCHD1Q96BP2 AL354702.1-201ENST00000442006 1960 ntBASIC11.1□□□□□ -0.63
CHCHD1Q96BP2 AL139193.2-201ENST00000553712 1954 ntTSL 1 (best) BASIC11.1□□□□□ -0.63
CHCHD1Q96BP2 NUP160-201ENST00000378460 5376 ntAPPRIS P2 TSL 1 (best) BASIC11.1□□□□□ -0.63
CHCHD1Q96BP2 AP005117.1-201ENST00000584346 1413 ntBASIC11.1□□□□□ -0.63
CHCHD1Q96BP2 GIPR-205ENST00000590918 3289 ntAPPRIS P2 TSL 1 (best) BASIC11.1□□□□□ -0.63
CHCHD1Q96BP2 NSD2-204ENST00000382891 7534 ntAPPRIS P1 TSL 5 BASIC11.1□□□□□ -0.63
CHCHD1Q96BP2 SLC4A8-205ENST00000535225 2262 ntTSL 2 BASIC11.1□□□□□ -0.63
CHCHD1Q96BP2 GRIK4-208ENST00000638419 3593 ntAPPRIS P1 TSL 5 BASIC11.1□□□□□ -0.63
CHCHD1Q96BP2 LAMB2-201ENST00000305544 5643 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
CHCHD1Q96BP2 DOK1-202ENST00000340004 1722 ntTSL 1 (best) BASIC11.1□□□□□ -0.63
CHCHD1Q96BP2 BTNL8-206ENST00000508408 1717 ntTSL 1 (best) BASIC11.1□□□□□ -0.63
CHCHD1Q96BP2 MBD4-201ENST00000249910 2470 ntAPPRIS P3 TSL 1 (best) BASIC11.1□□□□□ -0.63
CHCHD1Q96BP2 CHRFAM7A-201ENST00000299847 6220 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
CHCHD1Q96BP2 DUS2-201ENST00000358896 1933 ntAPPRIS P1 TSL 2 BASIC11.1□□□□□ -0.63
CHCHD1Q96BP2 IGLL1-201ENST00000249053 716 ntTSL 1 (best) BASIC11.1□□□□□ -0.63
CHCHD1Q96BP2 MED16-201ENST00000269814 1199 ntTSL 5 BASIC11.1□□□□□ -0.63
CHCHD1Q96BP2 MRPL52-201ENST00000311892 1042 ntTSL 3 BASIC11.1□□□□□ -0.63
CHCHD1Q96BP2 FAM187B-201ENST00000324675 1184 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
CHCHD1Q96BP2 TCTEX1D2-201ENST00000325318 673 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
CHCHD1Q96BP2 MRPL9-202ENST00000368830 1296 ntAPPRIS P3 TSL 1 (best) BASIC11.1□□□□□ -0.63
CHCHD1Q96BP2 HRAS-204ENST00000417302 1233 ntTSL 5 BASIC11.1□□□□□ -0.63
CHCHD1Q96BP2 AP000688.4-201ENST00000436303 446 ntTSL 3 BASIC11.1□□□□□ -0.63
CHCHD1Q96BP2 SNHG17-206ENST00000436764 973 ntTSL 5 BASIC11.1□□□□□ -0.63
CHCHD1Q96BP2 AC136628.4-201ENST00000520758 535 ntTSL 2 BASIC11.1□□□□□ -0.63
CHCHD1Q96BP2 LY6E-209ENST00000521003 740 ntAPPRIS P2 TSL 2 BASIC11.1□□□□□ -0.63
CHCHD1Q96BP2 MTHFSD-203ENST00000543303 1207 ntAPPRIS ALT2 TSL 1 (best) BASIC11.1□□□□□ -0.63
CHCHD1Q96BP2 COQ7-202ENST00000544894 819 ntAPPRIS ALT2 TSL 1 (best) BASIC11.1□□□□□ -0.63
CHCHD1Q96BP2 AC092725.1-201ENST00000565783 499 ntTSL 4 BASIC11.1□□□□□ -0.63
CHCHD1Q96BP2 MIR4651-201ENST00000582622 73 ntBASIC11.1□□□□□ -0.63
CHCHD1Q96BP2 AC122129.2-201ENST00000583598 466 ntTSL 5 BASIC11.1□□□□□ -0.63
CHCHD1Q96BP2 H2BFWT-202ENST00000611083 528 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
CHCHD1Q96BP2 AL139288.1-201ENST00000623748 933 ntBASIC11.1□□□□□ -0.63
CHCHD1Q96BP2 MTHFSD-220ENST00000634347 1207 ntAPPRIS P3 TSL 1 (best) BASIC11.1□□□□□ -0.63
CHCHD1Q96BP2 AC008735.6-201ENST00000635964 1292 ntAPPRIS P1 TSL 2 BASIC11.1□□□□□ -0.63
CHCHD1Q96BP2 ATP6AP2-220ENST00000636970 1187 ntAPPRIS ALT2 TSL 5 BASIC11.1□□□□□ -0.63
CHCHD1Q96BP2 C19orf12-209ENST00000623113 4242 ntTSL 2 BASIC11.1□□□□□ -0.63
CHCHD1Q96BP2 FAM189A2-201ENST00000257515 2423 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
CHCHD1Q96BP2 TMEM230-201ENST00000202834 1472 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
CHCHD1Q96BP2 LHCGR-202ENST00000401907 1477 ntTSL 5 BASIC11.1□□□□□ -0.63
CHCHD1Q96BP2 CHCHD3-201ENST00000262570 1598 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
CHCHD1Q96BP2 TBC1D1-203ENST00000402522 1567 ntTSL 2 BASIC11.1□□□□□ -0.63
CHCHD1Q96BP2 ZFYVE28-210ENST00000515169 1590 ntTSL 1 (best) BASIC11.1□□□□□ -0.63
CHCHD1Q96BP2 HIC2-203ENST00000443632 6940 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
CHCHD1Q96BP2 C10orf107-201ENST00000330194 1685 ntAPPRIS P2 TSL 1 (best) BASIC11.1□□□□□ -0.63
CHCHD1Q96BP2 GALNT16-201ENST00000337827 5708 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
CHCHD1Q96BP2 MAP7D3-201ENST00000316077 4567 ntAPPRIS P3 TSL 1 (best) BASIC11.1□□□□□ -0.63
CHCHD1Q96BP2 UBFD1-207ENST00000567212 4727 ntAPPRIS ALT2 TSL 2 BASIC11.1□□□□□ -0.63
CHCHD1Q96BP2 RAB18-208ENST00000611151 4931 ntTSL 5 BASIC11.1□□□□□ -0.63
CHCHD1Q96BP2 ARHGAP36-201ENST00000276211 3083 ntAPPRIS P1 TSL 2 BASIC11.1□□□□□ -0.63
CHCHD1Q96BP2 TAB2-208ENST00000636456 3092 ntTSL 5 BASIC11.1□□□□□ -0.63
CHCHD1Q96BP2 TMEM63B-202ENST00000323267 3198 ntAPPRIS P1 TSL 5 BASIC11.1□□□□□ -0.63
CHCHD1Q96BP2 KIF25-201ENST00000351261 1326 ntTSL 5 BASIC11.09□□□□□ -0.63
CHCHD1Q96BP2 EIF5A-204ENST00000416016 1336 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
CHCHD1Q96BP2 AMACR-205ENST00000426255 1316 ntTSL 2 BASIC11.09□□□□□ -0.63
CHCHD1Q96BP2 GOLGA2P10-204ENST00000618004 1349 ntTSL 1 (best) BASIC11.09□□□□□ -0.63
CHCHD1Q96BP2 NSUN5P1-202ENST00000421140 1535 ntBASIC11.09□□□□□ -0.63
CHCHD1Q96BP2 BX005266.2-201ENST00000450704 1549 ntTSL 1 (best) BASIC11.09□□□□□ -0.63
CHCHD1Q96BP2 DRG1-201ENST00000331457 1746 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
CHCHD1Q96BP2 AAAS-202ENST00000394384 1703 ntTSL 1 (best) BASIC11.09□□□□□ -0.63
CHCHD1Q96BP2 CYP2R1-207ENST00000532378 1746 ntTSL 5 BASIC11.09□□□□□ -0.63
CHCHD1Q96BP2 CASP8-202ENST00000264275 1906 ntAPPRIS ALT2 TSL 1 (best) BASIC11.09□□□□□ -0.63
CHCHD1Q96BP2 TRAK1-208ENST00000484786 2008 ntTSL 5 BASIC11.09□□□□□ -0.63
CHCHD1Q96BP2 DSCAML1-203ENST00000527706 6099 ntTSL 5 BASIC11.09□□□□□ -0.63
CHCHD1Q96BP2 NAALADL1-202ENST00000355721 2100 ntTSL 5 BASIC11.09□□□□□ -0.63
CHCHD1Q96BP2 AC099548.2-204ENST00000481651 2106 ntTSL 1 (best) BASIC11.09□□□□□ -0.63
CHCHD1Q96BP2 FOXP3-204ENST00000455775 2448 ntTSL 5 BASIC11.09□□□□□ -0.63
CHCHD1Q96BP2 DLX1-203ENST00000361725 2640 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
CHCHD1Q96BP2 TOR1AIP1-201ENST00000271583 3044 ntAPPRIS ALT2 TSL 5 BASIC11.09□□□□□ -0.63
CHCHD1Q96BP2 GOPC-202ENST00000368498 4450 ntTSL 1 (best) BASIC11.09□□□□□ -0.63
CHCHD1Q96BP2 AC004899.2-201ENST00000622993 3860 ntBASIC11.09□□□□□ -0.63
CHCHD1Q96BP2 C12orf43-202ENST00000445832 2397 ntAPPRIS ALT2 TSL 5 BASIC11.09□□□□□ -0.63
CHCHD1Q96BP2 NCALD-217ENST00000521599 2289 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
CHCHD1Q96BP2 CAPN14-202ENST00000403897 2197 ntAPPRIS P1 TSL 2 BASIC11.09□□□□□ -0.63
CHCHD1Q96BP2 SLC35E2-202ENST00000355439 2078 ntAPPRIS ALT2 TSL 1 (best) BASIC11.09□□□□□ -0.63
CHCHD1Q96BP2 LINC00116-201ENST00000414416 2051 ntAPPRIS P5 TSL 1 (best) BASIC11.09□□□□□ -0.63
CHCHD1Q96BP2 AGGF1P1-201ENST00000509500 2073 ntBASIC11.09□□□□□ -0.63
CHCHD1Q96BP2 TMEM143-202ENST00000377431 1960 ntTSL 1 (best) BASIC11.09□□□□□ -0.63
CHCHD1Q96BP2 ALDH8A1-204ENST00000367847 1587 ntTSL 2 BASIC11.09□□□□□ -0.63
CHCHD1Q96BP2 AC020910.6-201ENST00000623084 1459 ntBASIC11.09□□□□□ -0.63
CHCHD1Q96BP2 PYDC1-201ENST00000302964 813 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
CHCHD1Q96BP2 FGF8-201ENST00000320185 799 ntAPPRIS P4 TSL 1 (best) BASIC11.09□□□□□ -0.63
CHCHD1Q96BP2 CLN3-202ENST00000355477 1173 ntTSL 1 (best) BASIC11.09□□□□□ -0.63
CHCHD1Q96BP2 OPN1LW-201ENST00000369951 1261 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
Retrieved 100 of 98,524 protein–RNA pairs in 40.6 ms