Protein–RNA interactions for Protein: Q969H4

CNKSR1, Connector enhancer of kinase suppressor of ras 1, humanhuman

Predictions only

Length 720 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CNKSR1Q969H4 CCDC62-201ENST00000253079 3546 ntAPPRIS P2 TSL 1 (best) BASIC18.38■□□□□ 0.53
CNKSR1Q969H4 VASN-201ENST00000304735 2806 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
CNKSR1Q969H4 NDRG2-202ENST00000298687 2122 ntAPPRIS P4 TSL 1 (best) BASIC18.38■□□□□ 0.53
CNKSR1Q969H4 NDRG2-203ENST00000350792 2127 ntAPPRIS ALT1 TSL 1 (best) BASIC18.38■□□□□ 0.53
CNKSR1Q969H4 TMEM139-205ENST00000410004 2114 ntAPPRIS P1 TSL 2 BASIC18.38■□□□□ 0.53
CNKSR1Q969H4 CCDC197-206ENST00000640978 1429 ntAPPRIS ALT2 TSL 5 BASIC18.38■□□□□ 0.53
CNKSR1Q969H4 MZF1-201ENST00000215057 2905 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
CNKSR1Q969H4 AP003680.1-201ENST00000598970 3660 ntBASIC18.38■□□□□ 0.53
CNKSR1Q969H4 SLC8A3-203ENST00000357887 5259 ntTSL 5 BASIC18.38■□□□□ 0.53
CNKSR1Q969H4 SLC8A3-204ENST00000381269 5268 ntAPPRIS ALT1 TSL 1 (best) BASIC18.38■□□□□ 0.53
CNKSR1Q969H4 AD000864.1-201ENST00000624076 2295 ntBASIC18.38■□□□□ 0.53
CNKSR1Q969H4 MAP2K6-205ENST00000589647 1512 ntTSL 5 BASIC18.38■□□□□ 0.53
CNKSR1Q969H4 AC104809.1-201ENST00000425110 2345 ntTSL 2 BASIC18.38■□□□□ 0.53
CNKSR1Q969H4 ZNF84-208ENST00000539354 3237 ntAPPRIS P2 TSL 1 (best) BASIC18.38■□□□□ 0.53
CNKSR1Q969H4 TAP2-202ENST00000374899 2497 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
CNKSR1Q969H4 ERO1A-201ENST00000395686 5285 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
CNKSR1Q969H4 LRP10-203ENST00000546834 1780 ntAPPRIS ALT2 TSL 5 BASIC18.37■□□□□ 0.53
CNKSR1Q969H4 NOP14-201ENST00000314262 2889 ntAPPRIS P3 TSL 1 (best) BASIC18.37■□□□□ 0.53
CNKSR1Q969H4 APBB1-218ENST00000608655 1920 ntTSL 5 BASIC18.37■□□□□ 0.53
CNKSR1Q969H4 APBA2-207ENST00000558402 4031 ntAPPRIS P1 TSL 5 BASIC18.37■□□□□ 0.53
CNKSR1Q969H4 FAM151A-201ENST00000302250 2005 ntAPPRIS P2 TSL 1 (best) BASIC18.37■□□□□ 0.53
CNKSR1Q969H4 SLC29A1-206ENST00000371755 2112 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
CNKSR1Q969H4 SLC3A2-204ENST00000377891 2222 ntTSL 2 BASIC18.37■□□□□ 0.53
CNKSR1Q969H4 FRMD6-AS1-201ENST00000617151 2229 ntBASIC18.37■□□□□ 0.53
CNKSR1Q969H4 CACNA1I-201ENST00000401624 6740 ntAPPRIS ALT2 TSL 1 (best) BASIC18.37■□□□□ 0.53
CNKSR1Q969H4 WASHC2C-209ENST00000540872 4519 ntAPPRIS ALT2 TSL 1 (best) BASIC18.37■□□□□ 0.53
CNKSR1Q969H4 ATXN7-213ENST00000538065 6842 ntAPPRIS ALT2 TSL 1 (best) BASIC18.37■□□□□ 0.53
CNKSR1Q969H4 AL512625.1-201ENST00000305709 2541 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
CNKSR1Q969H4 LAIR2-201ENST00000301202 699 ntAPPRIS P4 TSL 1 (best) BASIC18.37■□□□□ 0.53
CNKSR1Q969H4 RHBDD2-203ENST00000428119 1274 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
CNKSR1Q969H4 AL157407.1-201ENST00000435784 904 ntBASIC18.37■□□□□ 0.53
CNKSR1Q969H4 HLA-DQB2-232ENST00000437316 1214 ntAPPRIS P1 BASIC18.37■□□□□ 0.53
CNKSR1Q969H4 IGHV3-37-201ENST00000518544 340 ntBASIC18.37■□□□□ 0.53
CNKSR1Q969H4 EIF1AD-211ENST00000533544 965 ntAPPRIS P1 TSL 3 BASIC18.37■□□□□ 0.53
CNKSR1Q969H4 LINC02417-201ENST00000542449 515 ntTSL 2 BASIC18.37■□□□□ 0.53
CNKSR1Q969H4 ZSCAN10-205ENST00000572548 618 ntTSL 3 BASIC18.37■□□□□ 0.53
CNKSR1Q969H4 PHBP15-201ENST00000574228 665 ntBASIC18.37■□□□□ 0.53
CNKSR1Q969H4 AC011462.2-201ENST00000598887 344 ntTSL 5 BASIC18.37■□□□□ 0.53
CNKSR1Q969H4 PRMT5-AS1-206ENST00000599580 847 ntTSL 5 BASIC18.37■□□□□ 0.53
CNKSR1Q969H4 MIR6756-201ENST00000616240 63 ntBASIC18.37■□□□□ 0.53
CNKSR1Q969H4 MBD3L2B-201ENST00000636986 860 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
CNKSR1Q969H4 MAEA-207ENST00000505177 1340 ntTSL 5 BASIC18.37■□□□□ 0.53
CNKSR1Q969H4 JRK-211ENST00000615982 2823 ntAPPRIS ALT2 TSL 1 (best) BASIC18.37■□□□□ 0.53
CNKSR1Q969H4 KCTD1-207ENST00000580059 1425 ntAPPRIS P1 TSL 3 BASIC18.37■□□□□ 0.53
CNKSR1Q969H4 PHKA1-205ENST00000541944 5944 ntAPPRIS ALT1 TSL 1 (best) BASIC18.37■□□□□ 0.53
CNKSR1Q969H4 PTPRA-205ENST00000399903 3337 ntTSL 5 BASIC18.37■□□□□ 0.53
CNKSR1Q969H4 HENMT1-202ENST00000370032 1874 ntAPPRIS P2 TSL 1 (best) BASIC18.37■□□□□ 0.53
CNKSR1Q969H4 GCKR-201ENST00000264717 2186 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
CNKSR1Q969H4 ZNF398-205ENST00000491174 2232 ntTSL 2 BASIC18.37■□□□□ 0.53
CNKSR1Q969H4 FAM57B-202ENST00000380495 2313 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
CNKSR1Q969H4 SMPD4-202ENST00000409031 4896 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
CNKSR1Q969H4 RSPO1-203ENST00000612451 2463 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
CNKSR1Q969H4 PCDHA2-201ENST00000378132 2626 ntAPPRIS ALT2 BASIC18.36■□□□□ 0.53
CNKSR1Q969H4 MIB2-232ENST00000520777 3321 ntAPPRIS ALT2 TSL 1 (best) BASIC18.36■□□□□ 0.53
CNKSR1Q969H4 PPP2R5B-201ENST00000164133 2745 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
CNKSR1Q969H4 ARHGAP22-201ENST00000249601 2751 ntAPPRIS P3 TSL 1 (best) BASIC18.36■□□□□ 0.53
CNKSR1Q969H4 OSER1-201ENST00000255174 1572 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
CNKSR1Q969H4 FOXRED1-201ENST00000263578 1970 ntAPPRIS P2 TSL 1 (best) BASIC18.36■□□□□ 0.53
CNKSR1Q969H4 HFE-203ENST00000336625 804 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
CNKSR1Q969H4 CISH-201ENST00000348721 2043 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
CNKSR1Q969H4 H2BFM-201ENST00000355016 1882 ntAPPRIS P1 TSL 2 BASIC18.36■□□□□ 0.53
CNKSR1Q969H4 APOA1-202ENST00000359492 932 ntAPPRIS P1 TSL 2 BASIC18.36■□□□□ 0.53
CNKSR1Q969H4 GEMIN7-202ENST00000391951 716 ntAPPRIS P1 TSL 2 BASIC18.36■□□□□ 0.53
CNKSR1Q969H4 AL672291.1-201ENST00000417047 462 ntTSL 3 BASIC18.36■□□□□ 0.53
CNKSR1Q969H4 VEGFB-202ENST00000426086 979 ntAPPRIS ALT1 TSL 1 (best) BASIC18.36■□□□□ 0.53
CNKSR1Q969H4 LINC00466-203ENST00000436475 1059 ntTSL 5 BASIC18.36■□□□□ 0.53
CNKSR1Q969H4 LINC00322-201ENST00000450205 699 ntTSL 3 BASIC18.36■□□□□ 0.53
CNKSR1Q969H4 AP000358.1-201ENST00000456260 156 ntBASIC18.36■□□□□ 0.53
CNKSR1Q969H4 AC006122.1-201ENST00000493323 440 ntBASIC18.36■□□□□ 0.53
CNKSR1Q969H4 SLC9A7P1-202ENST00000556476 2239 ntBASIC18.36■□□□□ 0.53
CNKSR1Q969H4 AC012508.2-201ENST00000567613 1472 ntBASIC18.36■□□□□ 0.53
CNKSR1Q969H4 ZNF581-203ENST00000587252 1324 ntAPPRIS P1 TSL 2 BASIC18.36■□□□□ 0.53
CNKSR1Q969H4 ZNF528-AS1-202ENST00000596746 929 ntTSL 5 BASIC18.36■□□□□ 0.53
CNKSR1Q969H4 FXYD6-FXYD2-202ENST00000614497 634 ntAPPRIS P1 TSL 3 BASIC18.36■□□□□ 0.53
CNKSR1Q969H4 NPIPB11-202ENST00000614927 1216 ntTSL 5 BASIC18.36■□□□□ 0.53
CNKSR1Q969H4 AC131160.1-201ENST00000639401 3058 ntAPPRIS P1 TSL 5 BASIC18.36■□□□□ 0.53
CNKSR1Q969H4 PRX-202ENST00000324001 4855 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
CNKSR1Q969H4 REPS1-208ENST00000450536 4537 ntAPPRIS ALT1 TSL 1 (best) BASIC18.36■□□□□ 0.53
CNKSR1Q969H4 ZBTB9-201ENST00000395064 2716 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
CNKSR1Q969H4 GPAT3-208ENST00000611707 2633 ntAPPRIS P1 TSL 5 BASIC18.36■□□□□ 0.53
CNKSR1Q969H4 UIMC1-201ENST00000377227 2570 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
CNKSR1Q969H4 LSM6-201ENST00000296581 2259 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
CNKSR1Q969H4 DRG2-201ENST00000225729 1964 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
CNKSR1Q969H4 CLCNKA-203ENST00000439316 1997 ntTSL 2 BASIC18.35■□□□□ 0.53
CNKSR1Q969H4 REXO1L4P-201ENST00000605109 1937 ntBASIC18.35■□□□□ 0.53
CNKSR1Q969H4 LAPTM4A-201ENST00000175091 1765 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
CNKSR1Q969H4 ZMYND10-202ENST00000360165 1757 ntAPPRIS ALT1 TSL 1 (best) BASIC18.35■□□□□ 0.53
CNKSR1Q969H4 AC144522.1-201ENST00000625111 1658 ntBASIC18.35■□□□□ 0.53
CNKSR1Q969H4 CYP2U1-202ENST00000508453 3125 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
CNKSR1Q969H4 OARD1-203ENST00000463088 1515 ntAPPRIS P1 TSL 2 BASIC18.35■□□□□ 0.53
CNKSR1Q969H4 RAN-210ENST00000541630 1475 ntTSL 2 BASIC18.35■□□□□ 0.53
CNKSR1Q969H4 CASP6-202ENST00000352981 1347 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
CNKSR1Q969H4 ZNF226-203ENST00000413984 716 ntTSL 3 BASIC18.35■□□□□ 0.53
CNKSR1Q969H4 TLE1P1-201ENST00000422965 589 ntBASIC18.35■□□□□ 0.53
CNKSR1Q969H4 TREX1-202ENST00000444177 1200 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
CNKSR1Q969H4 CICP12-201ENST00000455801 843 ntBASIC18.35■□□□□ 0.53
CNKSR1Q969H4 CHCHD2P9-201ENST00000461726 456 ntBASIC18.35■□□□□ 0.53
CNKSR1Q969H4 PLEKHA8P1-203ENST00000545609 277 ntTSL 3 BASIC18.35■□□□□ 0.53
CNKSR1Q969H4 SNRPD2-206ENST00000588301 702 ntAPPRIS P1 TSL 3 BASIC18.35■□□□□ 0.53
CNKSR1Q969H4 MUC1-226ENST00000614519 1093 ntTSL 2 BASIC18.35■□□□□ 0.53
Retrieved 100 of 98,524 protein–RNA pairs in 58.1 ms