Protein–RNA interactions for Protein: Q93038

TNFRSF25, Tumor necrosis factor receptor superfamily member 25, humanhuman

Predictions only

Length 417 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF25Q93038 ICAM2-201ENST00000412356 1334 ntAPPRIS P1 TSL 5 BASIC17.17■□□□□ 0.34
TNFRSF25Q93038 PTK7-210ENST00000471863 2412 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
TNFRSF25Q93038 ATG5-201ENST00000343245 3092 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
TNFRSF25Q93038 LINC00476-204ENST00000429781 2825 ntTSL 2 BASIC17.16■□□□□ 0.34
TNFRSF25Q93038 PARP10-201ENST00000313028 3497 ntAPPRIS P3 TSL 1 (best) BASIC17.16■□□□□ 0.34
TNFRSF25Q93038 WASHC2C-209ENST00000540872 4519 ntAPPRIS ALT2 TSL 1 (best) BASIC17.16■□□□□ 0.34
TNFRSF25Q93038 CLIC6-202ENST00000360731 3860 ntAPPRIS ALT2 TSL 1 (best) BASIC17.16■□□□□ 0.34
TNFRSF25Q93038 GCK-204ENST00000403799 2729 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
TNFRSF25Q93038 TANGO2-205ENST00000401886 1559 ntTSL 5 BASIC17.16■□□□□ 0.34
TNFRSF25Q93038 GPR17-201ENST00000272644 2062 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
TNFRSF25Q93038 AP001267.2-201ENST00000532619 2086 ntBASIC17.16■□□□□ 0.34
TNFRSF25Q93038 IMPDH1-203ENST00000354269 2580 ntTSL 2 BASIC17.16■□□□□ 0.34
TNFRSF25Q93038 RASSF5-205ENST00000581503 5586 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
TNFRSF25Q93038 AC005912.2-201ENST00000619492 2400 ntBASIC17.16■□□□□ 0.34
TNFRSF25Q93038 HOXB4-201ENST00000332503 3757 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
TNFRSF25Q93038 RNF169-201ENST00000299563 7823 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
TNFRSF25Q93038 EIF4G1-204ENST00000352767 5484 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
TNFRSF25Q93038 NDUFB7-201ENST00000215565 531 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
TNFRSF25Q93038 GUK1-206ENST00000366723 845 ntTSL 5 BASIC17.16■□□□□ 0.34
TNFRSF25Q93038 VCX3B-202ENST00000381032 1171 ntAPPRIS P2 TSL 5 BASIC17.16■□□□□ 0.34
TNFRSF25Q93038 AC099552.2-201ENST00000418523 456 ntTSL 3 BASIC17.16■□□□□ 0.34
TNFRSF25Q93038 AL391280.1-201ENST00000506969 1062 ntBASIC17.16■□□□□ 0.34
TNFRSF25Q93038 AC131206.1-201ENST00000538078 1211 ntBASIC17.16■□□□□ 0.34
TNFRSF25Q93038 C17orf62-239ENST00000585080 741 ntAPPRIS P1 TSL 5 BASIC17.16■□□□□ 0.34
TNFRSF25Q93038 ZNF790-AS1-204ENST00000589556 650 ntTSL 2 BASIC17.16■□□□□ 0.34
TNFRSF25Q93038 LINC02351-201ENST00000614728 289 ntTSL 2 BASIC17.16■□□□□ 0.34
TNFRSF25Q93038 Metazoa_SRP.80-201ENST00000619894 320 ntBASIC17.16■□□□□ 0.34
TNFRSF25Q93038 ANKRD35-201ENST00000355594 3342 ntAPPRIS P1 TSL 2 BASIC17.16■□□□□ 0.34
TNFRSF25Q93038 AGAP2-201ENST00000257897 5388 ntAPPRIS P3 TSL 1 (best) BASIC17.16■□□□□ 0.34
TNFRSF25Q93038 ZNF683-201ENST00000349618 1610 ntAPPRIS P3 TSL 1 (best) BASIC17.16■□□□□ 0.34
TNFRSF25Q93038 AL354702.1-201ENST00000442006 1960 ntBASIC17.16■□□□□ 0.34
TNFRSF25Q93038 CYP4F3-203ENST00000586182 2338 ntAPPRIS ALT1 TSL 2 BASIC17.16■□□□□ 0.34
TNFRSF25Q93038 PITPNM1-201ENST00000356404 4225 ntAPPRIS P3 TSL 1 (best) BASIC17.16■□□□□ 0.34
TNFRSF25Q93038 AC023908.3-201ENST00000564211 3047 ntBASIC17.16■□□□□ 0.34
TNFRSF25Q93038 DMAC2-204ENST00000438807 1454 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
TNFRSF25Q93038 RAD23B-201ENST00000358015 4119 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
TNFRSF25Q93038 DLGAP1-213ENST00000534970 2365 ntTSL 2 BASIC17.16■□□□□ 0.34
TNFRSF25Q93038 CDK16-211ENST00000518022 2022 ntAPPRIS P1 TSL 2 BASIC17.16■□□□□ 0.34
TNFRSF25Q93038 HTR4-209ENST00000521530 1323 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
TNFRSF25Q93038 CBX3-202ENST00000396386 1857 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
TNFRSF25Q93038 AC011840.2-201ENST00000563063 1520 ntBASIC17.16■□□□□ 0.34
TNFRSF25Q93038 ACHE-202ENST00000302913 2956 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
TNFRSF25Q93038 C22orf34-201ENST00000343999 2816 ntTSL 2 BASIC17.16■□□□□ 0.34
TNFRSF25Q93038 NHEG1-202ENST00000432330 1357 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
TNFRSF25Q93038 AC113367.3-201ENST00000508316 1912 ntBASIC17.15■□□□□ 0.34
TNFRSF25Q93038 TCEA2-203ENST00000361317 1427 ntTSL 2 BASIC17.15■□□□□ 0.34
TNFRSF25Q93038 DZIP1-204ENST00000376829 3738 ntAPPRIS P4 TSL 1 (best) BASIC17.15■□□□□ 0.34
TNFRSF25Q93038 AC007191.1-201ENST00000623179 2995 ntBASIC17.15■□□□□ 0.34
TNFRSF25Q93038 MUC1-228ENST00000620103 1811 ntAPPRIS ALT2 TSL 5 BASIC17.15■□□□□ 0.34
TNFRSF25Q93038 TUBA8-202ENST00000330423 2018 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
TNFRSF25Q93038 CCAR2-202ENST00000389279 3980 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
TNFRSF25Q93038 PDE6D-201ENST00000287600 1175 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
TNFRSF25Q93038 GPR17-202ENST00000393018 1177 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
TNFRSF25Q93038 MXI1-205ENST00000393134 889 ntTSL 2 BASIC17.15■□□□□ 0.34
TNFRSF25Q93038 PEX13-202ENST00000401576 1108 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
TNFRSF25Q93038 ITPR1-AS1-201ENST00000412804 858 ntTSL 2 BASIC17.15■□□□□ 0.34
TNFRSF25Q93038 CNN2P8-201ENST00000421872 913 ntBASIC17.15■□□□□ 0.34
TNFRSF25Q93038 AC020915.1-202ENST00000427361 922 ntAPPRIS ALT2 TSL 2 BASIC17.15■□□□□ 0.34
TNFRSF25Q93038 Z98749.2-207ENST00000443658 679 ntTSL 2 BASIC17.15■□□□□ 0.34
TNFRSF25Q93038 AL590640.2-201ENST00000457038 527 ntBASIC17.15■□□□□ 0.34
TNFRSF25Q93038 CLRN2-201ENST00000511148 823 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
TNFRSF25Q93038 C12orf10-204ENST00000548632 988 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
TNFRSF25Q93038 GLIS2-AS1-201ENST00000576080 340 ntTSL 2 BASIC17.15■□□□□ 0.34
TNFRSF25Q93038 SLC25A39-207ENST00000586016 1156 ntTSL 5 BASIC17.15■□□□□ 0.34
TNFRSF25Q93038 SCGB1C2-201ENST00000595228 478 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
TNFRSF25Q93038 ECM1P1-201ENST00000604092 1279 ntBASIC17.15■□□□□ 0.34
TNFRSF25Q93038 MALAT1-211ENST00000617791 394 ntTSL 5 BASIC17.15■□□□□ 0.34
TNFRSF25Q93038 MFRP-201ENST00000360167 1663 ntTSL 2 BASIC17.15■□□□□ 0.34
TNFRSF25Q93038 CRISPLD2-203ENST00000564567 1651 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
TNFRSF25Q93038 P2RX5-207ENST00000551178 1863 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
TNFRSF25Q93038 MARCH1-203ENST00000503008 5877 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
TNFRSF25Q93038 MCF2L2-208ENST00000473233 4748 ntAPPRIS ALT2 TSL 5 BASIC17.15■□□□□ 0.34
TNFRSF25Q93038 DHFR-201ENST00000439211 3917 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
TNFRSF25Q93038 FKRP-201ENST00000318584 3332 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
TNFRSF25Q93038 RPL15-201ENST00000307839 2730 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
TNFRSF25Q93038 COL25A1-203ENST00000399132 2724 ntAPPRIS P4 TSL 5 BASIC17.15■□□□□ 0.34
TNFRSF25Q93038 ARVCF-202ENST00000401994 2700 ntTSL 5 BASIC17.15■□□□□ 0.34
TNFRSF25Q93038 PODNL1-204ENST00000538517 2744 ntTSL 2 BASIC17.15■□□□□ 0.34
TNFRSF25Q93038 HTR3E-202ENST00000415389 2139 ntAPPRIS ALT2 TSL 1 (best) BASIC17.15■□□□□ 0.34
TNFRSF25Q93038 CALD1-206ENST00000424922 2124 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
TNFRSF25Q93038 GRK6-203ENST00000393576 2792 ntTSL 5 BASIC17.15■□□□□ 0.34
TNFRSF25Q93038 STK40-204ENST00000373132 3621 ntAPPRIS P3 TSL 1 (best) BASIC17.15■□□□□ 0.34
TNFRSF25Q93038 ZNF777-201ENST00000247930 3233 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
TNFRSF25Q93038 CLYBL-203ENST00000376355 6771 ntAPPRIS P1 TSL 2 BASIC17.15■□□□□ 0.34
TNFRSF25Q93038 CD8A-203ENST00000409511 3048 ntAPPRIS P4 TSL 2 BASIC17.15■□□□□ 0.34
TNFRSF25Q93038 AAMP-202ENST00000420660 1761 ntTSL 2 BASIC17.15■□□□□ 0.34
TNFRSF25Q93038 INHBE-201ENST00000266646 2429 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
TNFRSF25Q93038 GPR161-202ENST00000367835 2400 ntAPPRIS P1 TSL 2 BASIC17.15■□□□□ 0.34
TNFRSF25Q93038 SLC35G3-201ENST00000297307 2004 ntAPPRIS P1 BASIC17.14■□□□□ 0.34
TNFRSF25Q93038 PTPRF-209ENST00000438120 6377 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.34
TNFRSF25Q93038 PCDHA7-201ENST00000356878 2922 ntAPPRIS ALT2 BASIC17.14■□□□□ 0.33
TNFRSF25Q93038 ARHGAP39-202ENST00000377307 4673 ntAPPRIS P3 TSL 5 BASIC17.14■□□□□ 0.33
TNFRSF25Q93038 CACNA1A-201ENST00000360228 8627 ntAPPRIS P4 TSL 1 (best) BASIC17.14■□□□□ 0.33
TNFRSF25Q93038 RGS9-202ENST00000443584 2078 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
TNFRSF25Q93038 FCHSD2-204ENST00000409418 3154 ntAPPRIS P1 TSL 2 BASIC17.14■□□□□ 0.33
TNFRSF25Q93038 XPNPEP1-218ENST00000502935 2539 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
TNFRSF25Q93038 RMND1-202ENST00000367303 1854 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
TNFRSF25Q93038 SUFU-202ENST00000369902 5001 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
TNFRSF25Q93038 MUTYH-234ENST00000528013 1662 ntTSL 5 BASIC17.14■□□□□ 0.33
TNFRSF25Q93038 RABL2B-202ENST00000395590 2380 ntTSL 2 BASIC17.14■□□□□ 0.33
Retrieved 100 of 98,524 protein–RNA pairs in 29.4 ms