Protein–RNA interactions for Protein: Q8WV48

CCDC107, Coiled-coil domain-containing protein 107, humanhuman

Predictions only

Length 283 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC107Q8WV48 ADCY3-202ENST00000405392 4397 ntAPPRIS ALT1 TSL 1 (best) BASIC13.27□□□□□ -0.28
CCDC107Q8WV48 TNIP1-214ENST00000522226 2238 ntAPPRIS P3 TSL 2 BASIC13.27□□□□□ -0.28
CCDC107Q8WV48 CALCB-202ENST00000523376 2258 ntTSL 2 BASIC13.27□□□□□ -0.28
CCDC107Q8WV48 RNPS1-216ENST00000565678 2298 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.28
CCDC107Q8WV48 MTA3-202ENST00000405592 5832 ntTSL 2 BASIC13.27□□□□□ -0.28
CCDC107Q8WV48 THUMPD3-210ENST00000515662 2390 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
CCDC107Q8WV48 SLC26A5-202ENST00000339444 2474 ntTSL 1 (best) BASIC13.27□□□□□ -0.29
CCDC107Q8WV48 AC009961.1-203ENST00000607836 2520 ntTSL 1 (best) BASIC13.27□□□□□ -0.29
CCDC107Q8WV48 LGALS1-201ENST00000215909 560 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
CCDC107Q8WV48 METTL26-202ENST00000338401 544 ntTSL 1 (best) BASIC13.27□□□□□ -0.29
CCDC107Q8WV48 MRNIP-202ENST00000376931 1004 ntAPPRIS ALT2 TSL 2 BASIC13.27□□□□□ -0.29
CCDC107Q8WV48 ZFAND2B-207ENST00000409412 569 ntTSL 2 BASIC13.27□□□□□ -0.29
CCDC107Q8WV48 AC064807.1-202ENST00000423716 936 ntTSL 2 BASIC13.27□□□□□ -0.29
CCDC107Q8WV48 AHSA2-208ENST00000489653 1197 ntAPPRIS P1 TSL 5 BASIC13.27□□□□□ -0.29
CCDC107Q8WV48 SEC24B-AS1-201ENST00000499359 957 ntTSL 1 (best) BASIC13.27□□□□□ -0.29
CCDC107Q8WV48 CCDC74BP1-201ENST00000508880 1123 ntBASIC13.27□□□□□ -0.29
CCDC107Q8WV48 SEC24B-AS1-204ENST00000510971 554 ntTSL 4 BASIC13.27□□□□□ -0.29
CCDC107Q8WV48 RAB1B-202ENST00000527397 991 ntTSL 3 BASIC13.27□□□□□ -0.29
CCDC107Q8WV48 GMDS-AS1-205ENST00000529893 900 ntTSL 5 BASIC13.27□□□□□ -0.29
CCDC107Q8WV48 GALNT9-208ENST00000541995 1001 ntTSL 1 (best) BASIC13.27□□□□□ -0.29
CCDC107Q8WV48 TMEM5-AS1-201ENST00000546214 563 ntTSL 4 BASIC13.27□□□□□ -0.29
CCDC107Q8WV48 AC090515.4-201ENST00000558042 450 ntTSL 3 BASIC13.27□□□□□ -0.29
CCDC107Q8WV48 COQ9-214ENST00000567933 882 ntTSL 3 BASIC13.27□□□□□ -0.29
CCDC107Q8WV48 AC005829.1-201ENST00000570002 483 ntBASIC13.27□□□□□ -0.29
CCDC107Q8WV48 KF456478.1-201ENST00000585980 472 ntTSL 3 BASIC13.27□□□□□ -0.29
CCDC107Q8WV48 AC010503.2-201ENST00000599292 296 ntTSL 3 BASIC13.27□□□□□ -0.29
CCDC107Q8WV48 AC026979.3-201ENST00000607315 403 ntBASIC13.27□□□□□ -0.29
CCDC107Q8WV48 COLCA2-206ENST00000638573 1080 ntAPPRIS ALT2 TSL 1 (best) BASIC13.27□□□□□ -0.29
CCDC107Q8WV48 PPP4R4-201ENST00000304338 3868 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
CCDC107Q8WV48 AC068946.1-202ENST00000318673 2745 ntAPPRIS P1 TSL 2 BASIC13.27□□□□□ -0.29
CCDC107Q8WV48 KRT8P37-201ENST00000451609 1420 ntBASIC13.27□□□□□ -0.29
CCDC107Q8WV48 SV2A-201ENST00000369145 2903 ntTSL 2 BASIC13.27□□□□□ -0.29
CCDC107Q8WV48 FAM9C-205ENST00000542843 5858 ntTSL 1 (best) BASIC13.27□□□□□ -0.29
CCDC107Q8WV48 PDZD3-212ENST00000531114 2996 ntTSL 2 BASIC13.27□□□□□ -0.29
CCDC107Q8WV48 GOLM1-203ENST00000388712 3046 ntAPPRIS P2 TSL 1 (best) BASIC13.27□□□□□ -0.29
CCDC107Q8WV48 CACNA2D1-202ENST00000356860 7563 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
CCDC107Q8WV48 PRKACG-201ENST00000377276 1585 ntAPPRIS P1 BASIC13.27□□□□□ -0.29
CCDC107Q8WV48 XPO7-201ENST00000252512 4861 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
CCDC107Q8WV48 CDH3-201ENST00000264012 4929 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
CCDC107Q8WV48 LAPTM4A-201ENST00000175091 1765 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
CCDC107Q8WV48 SUSD6-201ENST00000342745 5388 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
CCDC107Q8WV48 SACM1L-201ENST00000389061 3723 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
CCDC107Q8WV48 ELL2P1-201ENST00000413990 1906 ntBASIC13.27□□□□□ -0.29
CCDC107Q8WV48 ZNF586-202ENST00000396150 1977 ntTSL 1 (best) BASIC13.27□□□□□ -0.29
CCDC107Q8WV48 UNC5C-203ENST00000506749 2220 ntTSL 1 (best) BASIC13.27□□□□□ -0.29
CCDC107Q8WV48 TRMT1-203ENST00000437766 2263 ntAPPRIS P3 TSL 1 (best) BASIC13.27□□□□□ -0.29
CCDC107Q8WV48 AL122018.1-201ENST00000446607 2310 ntBASIC13.27□□□□□ -0.29
CCDC107Q8WV48 POLM-202ENST00000335195 2444 ntTSL 1 (best) BASIC13.27□□□□□ -0.29
CCDC107Q8WV48 CYP1A1-210ENST00000617691 2521 ntTSL 5 BASIC13.27□□□□□ -0.29
CCDC107Q8WV48 RSPH9-202ENST00000372165 2586 ntTSL 2 BASIC13.27□□□□□ -0.29
CCDC107Q8WV48 GPAT3-201ENST00000264409 2625 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
CCDC107Q8WV48 ALOX15-201ENST00000293761 2677 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
CCDC107Q8WV48 RNF123-202ENST00000432042 2670 ntTSL 1 (best) BASIC13.26□□□□□ -0.29
CCDC107Q8WV48 SPOCK3-210ENST00000506886 2947 ntAPPRIS ALT2 TSL 5 BASIC13.26□□□□□ -0.29
CCDC107Q8WV48 RBPMS-202ENST00000320203 3110 ntAPPRIS P3 TSL 1 (best) BASIC13.26□□□□□ -0.29
CCDC107Q8WV48 PDE3B-202ENST00000455098 3665 ntAPPRIS ALT2 TSL 1 (best) BASIC13.26□□□□□ -0.29
CCDC107Q8WV48 AC079781.5-202ENST00000641784 3743 ntBASIC13.26□□□□□ -0.29
CCDC107Q8WV48 POLG-201ENST00000268124 4500 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
CCDC107Q8WV48 NMRK2-201ENST00000168977 1126 ntAPPRIS P3 TSL 2 BASIC13.26□□□□□ -0.29
CCDC107Q8WV48 FGFR3-201ENST00000260795 4132 ntAPPRIS P3 TSL 1 (best) BASIC13.26□□□□□ -0.29
CCDC107Q8WV48 ZNF596-201ENST00000308811 2783 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
CCDC107Q8WV48 PRSS55-201ENST00000328655 1124 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
CCDC107Q8WV48 TMEM212-201ENST00000334567 1881 ntAPPRIS P1 TSL 2 BASIC13.26□□□□□ -0.29
CCDC107Q8WV48 LCE1A-201ENST00000335123 422 ntAPPRIS P1 BASIC13.26□□□□□ -0.29
CCDC107Q8WV48 IMPDH1-201ENST00000338791 2881 ntTSL 2 BASIC13.26□□□□□ -0.29
CCDC107Q8WV48 DDT-201ENST00000350608 671 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
CCDC107Q8WV48 SLC22A16-202ENST00000368919 1987 ntAPPRIS P2 TSL 1 (best) BASIC13.26□□□□□ -0.29
CCDC107Q8WV48 OSBPL5-203ENST00000389989 3619 ntTSL 1 (best) BASIC13.26□□□□□ -0.29
CCDC107Q8WV48 NFIC-202ENST00000395111 1755 ntTSL 2 BASIC13.26□□□□□ -0.29
CCDC107Q8WV48 MBD1-209ENST00000398495 2178 ntTSL 5 BASIC13.26□□□□□ -0.29
CCDC107Q8WV48 KSR1-204ENST00000398988 7237 ntAPPRIS P2 TSL 5 BASIC13.26□□□□□ -0.29
CCDC107Q8WV48 MSRB1-202ENST00000399753 847 ntTSL 3 BASIC13.26□□□□□ -0.29
CCDC107Q8WV48 RAC2-202ENST00000401529 569 ntTSL 4 BASIC13.26□□□□□ -0.29
CCDC107Q8WV48 CSF2RB-202ENST00000403662 4863 ntAPPRIS P2 TSL 5 BASIC13.26□□□□□ -0.29
CCDC107Q8WV48 PHKG1P2-201ENST00000457537 863 ntBASIC13.26□□□□□ -0.29
CCDC107Q8WV48 ANKRD42-208ENST00000531895 1887 ntAPPRIS ALT2 TSL 1 (best) BASIC13.26□□□□□ -0.29
CCDC107Q8WV48 TXNDC2-204ENST00000536353 1703 ntTSL 5 BASIC13.26□□□□□ -0.29
CCDC107Q8WV48 AP002770.1-201ENST00000540547 428 ntTSL 4 BASIC13.26□□□□□ -0.29
CCDC107Q8WV48 VARS2-211ENST00000541562 3566 ntTSL 2 BASIC13.26□□□□□ -0.29
CCDC107Q8WV48 PPP1R14B-203ENST00000542235 920 ntTSL 1 (best) BASIC13.26□□□□□ -0.29
CCDC107Q8WV48 CERNA1-202ENST00000560518 1972 ntTSL 2 BASIC13.26□□□□□ -0.29
CCDC107Q8WV48 RARRES2P9-201ENST00000565168 469 ntBASIC13.26□□□□□ -0.29
CCDC107Q8WV48 CORO1A-208ENST00000565497 1348 ntTSL 5 BASIC13.26□□□□□ -0.29
CCDC107Q8WV48 RNF166-210ENST00000568683 1768 ntTSL 3 BASIC13.26□□□□□ -0.29
CCDC107Q8WV48 ABHD17A-204ENST00000590661 1079 ntTSL 1 (best) BASIC13.26□□□□□ -0.29
CCDC107Q8WV48 TRMT1-217ENST00000592062 2579 ntAPPRIS P3 TSL 5 BASIC13.26□□□□□ -0.29
CCDC107Q8WV48 NMRK2-205ENST00000616156 1139 ntAPPRIS ALT2 TSL 5 BASIC13.26□□□□□ -0.29
CCDC107Q8WV48 AC073263.1-201ENST00000616370 494 ntTSL 3 BASIC13.26□□□□□ -0.29
CCDC107Q8WV48 IMPDH1-217ENST00000626419 2862 ntAPPRIS ALT1 TSL 5 BASIC13.26□□□□□ -0.29
CCDC107Q8WV48 CFAP74-209ENST00000493964 5247 ntAPPRIS P5 TSL 5 BASIC13.26□□□□□ -0.29
CCDC107Q8WV48 CUEDC1-206ENST00000577830 3621 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
CCDC107Q8WV48 ADRB2-201ENST00000305988 3443 ntAPPRIS P1 BASIC13.26□□□□□ -0.29
CCDC107Q8WV48 SLC27A3-201ENST00000271857 3351 ntAPPRIS ALT2 TSL 1 (best) BASIC13.26□□□□□ -0.29
CCDC107Q8WV48 ATP6V0A4-201ENST00000310018 3135 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
CCDC107Q8WV48 SLC4A5-201ENST00000346834 6233 ntAPPRIS P4 TSL 5 BASIC13.26□□□□□ -0.29
CCDC107Q8WV48 PML-208ENST00000436891 3010 ntAPPRIS ALT2 TSL 5 BASIC13.26□□□□□ -0.29
CCDC107Q8WV48 KDELR2-201ENST00000258739 2884 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
CCDC107Q8WV48 ZNF384-202ENST00000355772 2514 ntTSL 1 (best) BASIC13.26□□□□□ -0.29
CCDC107Q8WV48 ARHGAP45-201ENST00000313093 4273 ntAPPRIS P3 TSL 1 (best) BASIC13.25□□□□□ -0.29
CCDC107Q8WV48 SREBF1-202ENST00000355815 4253 ntAPPRIS ALT2 TSL 1 (best) BASIC13.25□□□□□ -0.29
Retrieved 100 of 98,524 protein–RNA pairs in 46.5 ms