Protein–RNA interactions for Protein: Q8TAU0

NKX2-3, Homeobox protein Nkx-2.3, humanhuman

Predictions only

Length 364 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NKX2-3Q8TAU0 ADM-202ENST00000524948 584 ntTSL 2 BASIC17.91■□□□□ 0.46
NKX2-3Q8TAU0 AC078819.1-201ENST00000547454 765 ntBASIC17.91■□□□□ 0.46
NKX2-3Q8TAU0 AC012085.1-201ENST00000548270 765 ntBASIC17.91■□□□□ 0.46
NKX2-3Q8TAU0 SSTR5-AS1-201ENST00000565992 575 ntTSL 4 BASIC17.91■□□□□ 0.46
NKX2-3Q8TAU0 AC139099.3-201ENST00000572850 472 ntTSL 5 BASIC17.91■□□□□ 0.46
NKX2-3Q8TAU0 EGLN2-209ENST00000594140 991 ntTSL 2 BASIC17.91■□□□□ 0.46
NKX2-3Q8TAU0 PSMB6-205ENST00000614486 871 ntTSL 2 BASIC17.91■□□□□ 0.46
NKX2-3Q8TAU0 GNB2-202ENST00000393924 1524 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
NKX2-3Q8TAU0 RAB5B-202ENST00000448789 1530 ntTSL 2 BASIC17.91■□□□□ 0.46
NKX2-3Q8TAU0 UBE3B-212ENST00000540230 1541 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
NKX2-3Q8TAU0 SPATA33-210ENST00000611218 1546 ntAPPRIS ALT2 TSL 2 BASIC17.91■□□□□ 0.46
NKX2-3Q8TAU0 TEX28-203ENST00000617225 1525 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
NKX2-3Q8TAU0 HEBP2-204ENST00000607197 10014 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
NKX2-3Q8TAU0 RCOR2-201ENST00000301459 2604 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
NKX2-3Q8TAU0 SLC6A13-203ENST00000445055 1950 ntTSL 2 BASIC17.91■□□□□ 0.46
NKX2-3Q8TAU0 SYNM-201ENST00000328642 3960 ntAPPRIS ALT2 TSL 1 (best) BASIC17.91■□□□□ 0.46
NKX2-3Q8TAU0 AC055811.4-201ENST00000624039 1754 ntBASIC17.91■□□□□ 0.46
NKX2-3Q8TAU0 SIGLEC11-202ENST00000426971 2479 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
NKX2-3Q8TAU0 TPBG-202ENST00000535040 3392 ntAPPRIS P1 TSL 2 BASIC17.91■□□□□ 0.46
NKX2-3Q8TAU0 MAGEA2-209ENST00000623806 2025 ntAPPRIS P1 TSL 2 BASIC17.91■□□□□ 0.46
NKX2-3Q8TAU0 SREBF2-201ENST00000361204 5240 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
NKX2-3Q8TAU0 GOLGA5-201ENST00000163416 2969 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
NKX2-3Q8TAU0 RGS3-201ENST00000317613 2542 ntTSL 2 BASIC17.91■□□□□ 0.46
NKX2-3Q8TAU0 APP-208ENST00000439274 2517 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
NKX2-3Q8TAU0 ZNF777-201ENST00000247930 3233 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
NKX2-3Q8TAU0 CLDN22-201ENST00000323319 2581 ntAPPRIS P1 BASIC17.9■□□□□ 0.46
NKX2-3Q8TAU0 MAOB-201ENST00000378069 2566 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
NKX2-3Q8TAU0 SMPDL3A-201ENST00000368440 1851 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
NKX2-3Q8TAU0 C4orf32-201ENST00000309733 8901 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
NKX2-3Q8TAU0 HIF3A-218ENST00000600383 2101 ntTSL 2 BASIC17.9■□□□□ 0.46
NKX2-3Q8TAU0 ACTN4-201ENST00000252699 4963 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
NKX2-3Q8TAU0 LRRC57-202ENST00000397130 2384 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
NKX2-3Q8TAU0 AGAP4-208ENST00000618171 2387 ntTSL 5 BASIC17.9■□□□□ 0.46
NKX2-3Q8TAU0 FASTKD5-201ENST00000380266 2874 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
NKX2-3Q8TAU0 GPR84-201ENST00000267015 1497 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
NKX2-3Q8TAU0 DMAC2-204ENST00000438807 1454 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
NKX2-3Q8TAU0 EHF-210ENST00000531794 1481 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
NKX2-3Q8TAU0 KAT8-201ENST00000219797 1525 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
NKX2-3Q8TAU0 TMEM256-201ENST00000302422 486 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
NKX2-3Q8TAU0 RANBP1-201ENST00000331821 837 ntAPPRIS P3 TSL 1 (best) BASIC17.9■□□□□ 0.46
NKX2-3Q8TAU0 DYDC1-201ENST00000372202 612 ntAPPRIS P1 TSL 3 BASIC17.9■□□□□ 0.46
NKX2-3Q8TAU0 PPIE-203ENST00000372830 1198 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
NKX2-3Q8TAU0 HIST1H2AH-201ENST00000377459 387 ntAPPRIS P1 BASIC17.9■□□□□ 0.46
NKX2-3Q8TAU0 KLK8-204ENST00000391806 1051 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
NKX2-3Q8TAU0 AL645937.2-201ENST00000396808 931 ntBASIC17.9■□□□□ 0.46
NKX2-3Q8TAU0 AC007319.1-202ENST00000412276 829 ntTSL 5 BASIC17.9■□□□□ 0.46
NKX2-3Q8TAU0 AC233976.1-201ENST00000425150 451 ntTSL 3 BASIC17.9■□□□□ 0.46
NKX2-3Q8TAU0 AC016723.1-201ENST00000430546 633 ntTSL 3 BASIC17.9■□□□□ 0.46
NKX2-3Q8TAU0 AL731661.1-201ENST00000438217 758 ntTSL 5 BASIC17.9■□□□□ 0.46
NKX2-3Q8TAU0 AL049698.1-202ENST00000441716 757 ntTSL 5 BASIC17.9■□□□□ 0.46
NKX2-3Q8TAU0 BX284668.4-201ENST00000453917 508 ntBASIC17.9■□□□□ 0.46
NKX2-3Q8TAU0 RN7SL769P-201ENST00000469386 295 ntBASIC17.9■□□□□ 0.46
NKX2-3Q8TAU0 CNGA4-202ENST00000533426 936 ntTSL 2 BASIC17.9■□□□□ 0.46
NKX2-3Q8TAU0 FANCA-204ENST00000534992 1088 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
NKX2-3Q8TAU0 NAT9-222ENST00000583476 583 ntTSL 3 BASIC17.9■□□□□ 0.46
NKX2-3Q8TAU0 PRCD-204ENST00000586148 630 ntAPPRIS P1 TSL 5 BASIC17.9■□□□□ 0.46
NKX2-3Q8TAU0 PRCD-210ENST00000592014 462 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
NKX2-3Q8TAU0 ECM1P1-201ENST00000604092 1279 ntBASIC17.9■□□□□ 0.46
NKX2-3Q8TAU0 CCL5-202ENST00000605140 1244 ntAPPRIS P1 TSL 5 BASIC17.9■□□□□ 0.46
NKX2-3Q8TAU0 AL445288.1-201ENST00000610846 654 ntTSL 4 BASIC17.9■□□□□ 0.46
NKX2-3Q8TAU0 CYP4F11-202ENST00000326742 2877 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
NKX2-3Q8TAU0 PPRC1-201ENST00000278070 5330 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
NKX2-3Q8TAU0 FBF1-205ENST00000586717 4825 ntAPPRIS ALT2 TSL 5 BASIC17.9■□□□□ 0.46
NKX2-3Q8TAU0 SYT5-207ENST00000590851 3619 ntTSL 2 BASIC17.9■□□□□ 0.46
NKX2-3Q8TAU0 PTPN20-206ENST00000395722 1995 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
NKX2-3Q8TAU0 CAPN5-202ENST00000456580 2805 ntTSL 2 BASIC17.9■□□□□ 0.46
NKX2-3Q8TAU0 AGT-201ENST00000366667 2291 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.46
NKX2-3Q8TAU0 GABARAPL1-218ENST00000546017 2294 ntTSL 2 BASIC17.89■□□□□ 0.46
NKX2-3Q8TAU0 EXO5-203ENST00000372703 2567 ntAPPRIS P1 TSL 2 BASIC17.89■□□□□ 0.46
NKX2-3Q8TAU0 LEF1-202ENST00000379951 3477 ntTSL 1 (best) BASIC17.89■□□□□ 0.46
NKX2-3Q8TAU0 VPS37A-201ENST00000324849 4906 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.46
NKX2-3Q8TAU0 UGDH-201ENST00000316423 3216 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.46
NKX2-3Q8TAU0 TOM1L2-205ENST00000478943 2098 ntTSL 2 BASIC17.89■□□□□ 0.45
NKX2-3Q8TAU0 TBC1D3G-201ENST00000569055 2065 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
NKX2-3Q8TAU0 TBC1D3H-201ENST00000610350 2065 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
NKX2-3Q8TAU0 TBC1D3L-202ENST00000617678 2065 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
NKX2-3Q8TAU0 METTL21A-203ENST00000411432 4805 ntAPPRIS P1 TSL 2 BASIC17.89■□□□□ 0.45
NKX2-3Q8TAU0 ZMYND15-204ENST00000573751 2409 ntTSL 2 BASIC17.89■□□□□ 0.45
NKX2-3Q8TAU0 TSC1-202ENST00000403810 1507 ntTSL 1 (best) BASIC17.89■□□□□ 0.45
NKX2-3Q8TAU0 DCUN1D4-203ENST00000451288 4269 ntTSL 2 BASIC17.89■□□□□ 0.45
NKX2-3Q8TAU0 EMC3-AS1-202ENST00000366264 559 ntTSL 4 BASIC17.89■□□□□ 0.45
NKX2-3Q8TAU0 C9orf24-203ENST00000379126 496 ntTSL 1 (best) BASIC17.89■□□□□ 0.45
NKX2-3Q8TAU0 AC017104.1-201ENST00000415129 720 ntTSL 3 BASIC17.89■□□□□ 0.45
NKX2-3Q8TAU0 AL021707.3-201ENST00000418803 527 ntTSL 5 BASIC17.89■□□□□ 0.45
NKX2-3Q8TAU0 CNN2P8-201ENST00000421872 913 ntBASIC17.89■□□□□ 0.45
NKX2-3Q8TAU0 FNTAP2-201ENST00000430308 634 ntBASIC17.89■□□□□ 0.45
NKX2-3Q8TAU0 HCST-202ENST00000437550 445 ntAPPRIS ALT2 TSL 1 (best) BASIC17.89■□□□□ 0.45
NKX2-3Q8TAU0 AL161719.1-201ENST00000442716 385 ntTSL 5 BASIC17.89■□□□□ 0.45
NKX2-3Q8TAU0 AL591846.1-201ENST00000451736 433 ntBASIC17.89■□□□□ 0.45
NKX2-3Q8TAU0 AC120057.1-201ENST00000483947 663 ntBASIC17.89■□□□□ 0.45
NKX2-3Q8TAU0 TMEM198B-204ENST00000484016 896 ntBASIC17.89■□□□□ 0.45
NKX2-3Q8TAU0 MBP-227ENST00000526111 581 ntTSL 4 BASIC17.89■□□□□ 0.45
NKX2-3Q8TAU0 C1RL-212ENST00000545337 813 ntTSL 1 (best) BASIC17.89■□□□□ 0.45
NKX2-3Q8TAU0 MIR4706-201ENST00000582134 82 ntBASIC17.89■□□□□ 0.45
NKX2-3Q8TAU0 KLK3-211ENST00000597483 810 ntTSL 2 BASIC17.89■□□□□ 0.45
NKX2-3Q8TAU0 KC6-205ENST00000599934 556 ntTSL 4 BASIC17.89■□□□□ 0.45
NKX2-3Q8TAU0 PDGFRL-201ENST00000251630 1901 ntAPPRIS P1 TSL 5 BASIC17.89■□□□□ 0.45
NKX2-3Q8TAU0 RAB23-202ENST00000468148 4837 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
NKX2-3Q8TAU0 TMEM170A-207ENST00000569540 2331 ntTSL 2 BASIC17.89■□□□□ 0.45
NKX2-3Q8TAU0 CERS3-202ENST00000394113 2045 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
Retrieved 100 of 98,524 protein–RNA pairs in 51.1 ms