Protein–RNA interactions for Protein: Q8NEB9

PIK3C3, Phosphatidylinositol 3-kinase catalytic subunit type 3, humanhuman

Predictions only

Length 887 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PIK3C3Q8NEB9 TNFRSF10C-201ENST00000356864 1718 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
PIK3C3Q8NEB9 SPATA16-201ENST00000351008 2106 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
PIK3C3Q8NEB9 CPA1-201ENST00000011292 1487 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
PIK3C3Q8NEB9 CICP11-201ENST00000434745 2827 ntBASIC14.37□□□□□ -0.11
PIK3C3Q8NEB9 UBR2-201ENST00000372899 7857 ntAPPRIS P2 TSL 1 (best) BASIC14.37□□□□□ -0.11
PIK3C3Q8NEB9 UBR2-202ENST00000372901 7857 ntAPPRIS ALT1 TSL 5 BASIC14.37□□□□□ -0.11
PIK3C3Q8NEB9 MPPED2-202ENST00000448418 5591 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
PIK3C3Q8NEB9 KIF3C-201ENST00000264712 5344 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
PIK3C3Q8NEB9 CAB39-201ENST00000258418 3826 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
PIK3C3Q8NEB9 ERC1-219ENST00000546231 4390 ntTSL 5 BASIC14.37□□□□□ -0.11
PIK3C3Q8NEB9 RET-201ENST00000340058 4149 ntAPPRIS ALT2 TSL 1 (best) BASIC14.37□□□□□ -0.11
PIK3C3Q8NEB9 AC113367.3-201ENST00000508316 1912 ntBASIC14.37□□□□□ -0.11
PIK3C3Q8NEB9 AL355493.2-201ENST00000568270 1395 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
PIK3C3Q8NEB9 AL365205.1-204ENST00000359201 2098 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
PIK3C3Q8NEB9 SYMPK-213ENST00000599460 5449 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
PIK3C3Q8NEB9 MUTYH-211ENST00000456914 1692 ntAPPRIS ALT2 TSL 1 (best) BASIC14.37□□□□□ -0.11
PIK3C3Q8NEB9 AC097359.2-201ENST00000604992 2389 ntBASIC14.37□□□□□ -0.11
PIK3C3Q8NEB9 PNLDC1-202ENST00000392167 1816 ntAPPRIS P1 TSL 2 BASIC14.37□□□□□ -0.11
PIK3C3Q8NEB9 NSUN5P1-206ENST00000457988 1836 ntTSL 2 BASIC14.37□□□□□ -0.11
PIK3C3Q8NEB9 SLC27A3-201ENST00000271857 3351 ntAPPRIS ALT2 TSL 1 (best) BASIC14.37□□□□□ -0.11
PIK3C3Q8NEB9 PAPOLA-201ENST00000216277 4519 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
PIK3C3Q8NEB9 MRPL55-201ENST00000295008 632 ntAPPRIS P1 TSL 2 BASIC14.37□□□□□ -0.11
PIK3C3Q8NEB9 H2AFZ-201ENST00000296417 979 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
PIK3C3Q8NEB9 CSNK1G2-AS1-201ENST00000314315 1252 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
PIK3C3Q8NEB9 DNAJB3-202ENST00000449667 1266 ntBASIC14.37□□□□□ -0.11
PIK3C3Q8NEB9 AC108047.1-201ENST00000457407 404 ntTSL 2 BASIC14.37□□□□□ -0.11
PIK3C3Q8NEB9 AC063976.1-201ENST00000457890 381 ntTSL 2 BASIC14.37□□□□□ -0.11
PIK3C3Q8NEB9 AL160313.1-201ENST00000502101 1039 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
PIK3C3Q8NEB9 FAM86HP-203ENST00000511564 521 ntTSL 2 BASIC14.37□□□□□ -0.11
PIK3C3Q8NEB9 AC103736.1-203ENST00000524565 872 ntTSL 3 BASIC14.37□□□□□ -0.11
PIK3C3Q8NEB9 NAALADL1-207ENST00000526799 959 ntTSL 5 BASIC14.37□□□□□ -0.11
PIK3C3Q8NEB9 ALG1L8P-201ENST00000533887 760 ntBASIC14.37□□□□□ -0.11
PIK3C3Q8NEB9 PXN-AS1-202ENST00000538804 508 ntTSL 4 BASIC14.37□□□□□ -0.11
PIK3C3Q8NEB9 METTL23-203ENST00000586738 1059 ntTSL 5 BASIC14.37□□□□□ -0.11
PIK3C3Q8NEB9 METTL23-205ENST00000588302 925 ntTSL 5 BASIC14.37□□□□□ -0.11
PIK3C3Q8NEB9 AC011467.4-201ENST00000594891 528 ntBASIC14.37□□□□□ -0.11
PIK3C3Q8NEB9 ACYP2-209ENST00000607452 831 ntTSL 2 BASIC14.37□□□□□ -0.11
PIK3C3Q8NEB9 AL596442.2-201ENST00000610240 980 ntBASIC14.37□□□□□ -0.11
PIK3C3Q8NEB9 GOLGA2-215ENST00000639983 1038 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
PIK3C3Q8NEB9 HIST1H2AG-201ENST00000359193 2250 ntAPPRIS P1 BASIC14.37□□□□□ -0.11
PIK3C3Q8NEB9 HTR3A-205ENST00000504030 2432 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
PIK3C3Q8NEB9 FAM84B-201ENST00000304916 5404 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
PIK3C3Q8NEB9 TXNDC2-204ENST00000536353 1703 ntTSL 5 BASIC14.37□□□□□ -0.11
PIK3C3Q8NEB9 CUEDC1-206ENST00000577830 3621 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
PIK3C3Q8NEB9 FHDC1-202ENST00000511601 6583 ntAPPRIS P1 TSL 5 BASIC14.37□□□□□ -0.11
PIK3C3Q8NEB9 SEPT9-220ENST00000588690 2919 ntTSL 5 BASIC14.37□□□□□ -0.11
PIK3C3Q8NEB9 JADE2-203ENST00000395003 6465 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
PIK3C3Q8NEB9 OPCML-202ENST00000374778 1302 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
PIK3C3Q8NEB9 EHF-210ENST00000531794 1481 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
PIK3C3Q8NEB9 HACD3-206ENST00000565299 1465 ntTSL 5 BASIC14.37□□□□□ -0.11
PIK3C3Q8NEB9 CYP1B1-AS1-201ENST00000413828 1781 ntTSL 5 BASIC14.37□□□□□ -0.11
PIK3C3Q8NEB9 IL1RN-203ENST00000361779 1922 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
PIK3C3Q8NEB9 PCDHGB5-202ENST00000621169 2670 ntAPPRIS ALT2 BASIC14.37□□□□□ -0.11
PIK3C3Q8NEB9 C15orf59-204ENST00000569673 6573 ntAPPRIS P1 TSL 5 BASIC14.37□□□□□ -0.11
PIK3C3Q8NEB9 CYB561-201ENST00000360793 3001 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
PIK3C3Q8NEB9 BTN1A1-201ENST00000244513 2895 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
PIK3C3Q8NEB9 PAX6-202ENST00000379107 2579 ntAPPRIS P4 TSL 5 BASIC14.36□□□□□ -0.11
PIK3C3Q8NEB9 AL591623.1-201ENST00000417786 1960 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
PIK3C3Q8NEB9 CYB561D1-201ENST00000310611 5009 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
PIK3C3Q8NEB9 KHNYN-201ENST00000251343 6725 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
PIK3C3Q8NEB9 DDX59-206ENST00000447706 2900 ntTSL 2 BASIC14.36□□□□□ -0.11
PIK3C3Q8NEB9 ZPBP2-202ENST00000377940 2177 ntAPPRIS ALT2 TSL 1 (best) BASIC14.36□□□□□ -0.11
PIK3C3Q8NEB9 CENPO-202ENST00000380834 4386 ntAPPRIS P1 TSL 5 BASIC14.36□□□□□ -0.11
PIK3C3Q8NEB9 OXCT1-AS1-201ENST00000508458 1731 ntTSL 3 BASIC14.36□□□□□ -0.11
PIK3C3Q8NEB9 AC005899.8-201ENST00000625127 3153 ntTSL 5 BASIC14.36□□□□□ -0.11
PIK3C3Q8NEB9 CTRB2-201ENST00000303037 901 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
PIK3C3Q8NEB9 STOML1-203ENST00000359750 984 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
PIK3C3Q8NEB9 CCDC107-204ENST00000378409 1173 ntAPPRIS ALT2 TSL 1 (best) BASIC14.36□□□□□ -0.11
PIK3C3Q8NEB9 FO393414.2-201ENST00000405153 598 ntBASIC14.36□□□□□ -0.11
PIK3C3Q8NEB9 SPDYE17-201ENST00000412399 783 ntBASIC14.36□□□□□ -0.11
PIK3C3Q8NEB9 NCBP2-203ENST00000422610 676 ntTSL 2 BASIC14.36□□□□□ -0.11
PIK3C3Q8NEB9 HHATL-AS1-201ENST00000423165 557 ntTSL 4 BASIC14.36□□□□□ -0.11
PIK3C3Q8NEB9 AL121832.1-203ENST00000433121 475 ntTSL 3 BASIC14.36□□□□□ -0.11
PIK3C3Q8NEB9 HIST3H2BA-201ENST00000436555 524 ntBASIC14.36□□□□□ -0.11
PIK3C3Q8NEB9 RBPMS2P1-201ENST00000437762 623 ntBASIC14.36□□□□□ -0.11
PIK3C3Q8NEB9 NDUFB2-202ENST00000460088 420 ntTSL 3 BASIC14.36□□□□□ -0.11
PIK3C3Q8NEB9 AC093904.3-201ENST00000492300 368 ntTSL 2 BASIC14.36□□□□□ -0.11
PIK3C3Q8NEB9 VASH2-211ENST00000517399 1068 ntAPPRIS ALT1 TSL 1 (best) BASIC14.36□□□□□ -0.11
PIK3C3Q8NEB9 BANF1P1-201ENST00000553684 263 ntBASIC14.36□□□□□ -0.11
PIK3C3Q8NEB9 AP3S2-204ENST00000558011 738 ntTSL 3 BASIC14.36□□□□□ -0.11
PIK3C3Q8NEB9 AC093520.2-201ENST00000561830 333 ntBASIC14.36□□□□□ -0.11
PIK3C3Q8NEB9 HAUS2-211ENST00000639412 375 ntTSL 2 BASIC14.36□□□□□ -0.11
PIK3C3Q8NEB9 AC092634.8-201ENST00000639687 773 ntTSL 5 BASIC14.36□□□□□ -0.11
PIK3C3Q8NEB9 SEPT11-206ENST00000505788 2079 ntAPPRIS ALT1 TSL 5 BASIC14.36□□□□□ -0.11
PIK3C3Q8NEB9 XRCC3-211ENST00000555055 2584 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
PIK3C3Q8NEB9 TRMT1-217ENST00000592062 2579 ntAPPRIS P3 TSL 5 BASIC14.36□□□□□ -0.11
PIK3C3Q8NEB9 TAB1-201ENST00000216160 3237 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
PIK3C3Q8NEB9 CUL1-201ENST00000325222 3064 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
PIK3C3Q8NEB9 TBC1D24-207ENST00000627285 4382 ntAPPRIS P3 TSL 5 BASIC14.36□□□□□ -0.11
PIK3C3Q8NEB9 CHRNA7-201ENST00000306901 6181 ntAPPRIS P3 TSL 1 (best) BASIC14.36□□□□□ -0.11
PIK3C3Q8NEB9 CHIA-201ENST00000343320 1624 ntAPPRIS P1 TSL 5 BASIC14.36□□□□□ -0.11
PIK3C3Q8NEB9 TPD52L2-206ENST00000358548 2275 ntTSL 2 BASIC14.36□□□□□ -0.11
PIK3C3Q8NEB9 ADAM15-209ENST00000449910 2946 ntAPPRIS ALT2 TSL 1 (best) BASIC14.36□□□□□ -0.11
PIK3C3Q8NEB9 AMT-224ENST00000635808 1610 ntTSL 5 BASIC14.36□□□□□ -0.11
PIK3C3Q8NEB9 MED12L-203ENST00000422248 2757 ntAPPRIS ALT2 TSL 2 BASIC14.36□□□□□ -0.11
PIK3C3Q8NEB9 ZSCAN32-215ENST00000618425 2788 ntTSL 2 BASIC14.36□□□□□ -0.11
PIK3C3Q8NEB9 ABR-205ENST00000544583 5595 ntTSL 2 BASIC14.36□□□□□ -0.11
PIK3C3Q8NEB9 GORASP2-201ENST00000234160 3173 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
PIK3C3Q8NEB9 RBPJ-206ENST00000361572 1697 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
PIK3C3Q8NEB9 CDH20-202ENST00000536675 2855 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Retrieved 100 of 98,524 protein–RNA pairs in 159.6 ms