Protein–RNA interactions for Protein: Q86UE6

LRRTM1, Leucine-rich repeat transmembrane neuronal protein 1, humanhuman

Predictions only

Length 522 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRRTM1Q86UE6 TNFRSF11A-206ENST00000617039 3756 ntAPPRIS ALT2 TSL 1 (best) BASIC13.27□□□□□ -0.28
LRRTM1Q86UE6 UBE3B-202ENST00000342494 5722 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.28
LRRTM1Q86UE6 KDELR2-201ENST00000258739 2884 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.28
LRRTM1Q86UE6 BRAP-201ENST00000327551 1947 ntTSL 1 (best) BASIC13.27□□□□□ -0.28
LRRTM1Q86UE6 XKR5-201ENST00000618742 4893 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.28
LRRTM1Q86UE6 AC010247.2-201ENST00000559786 1955 ntTSL 1 (best) BASIC13.27□□□□□ -0.28
LRRTM1Q86UE6 TMBIM4-202ENST00000358230 2952 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.28
LRRTM1Q86UE6 LRRC20-204ENST00000373224 3095 ntAPPRIS P1 TSL 2 BASIC13.27□□□□□ -0.28
LRRTM1Q86UE6 RLF-201ENST00000372771 6246 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.28
LRRTM1Q86UE6 PHKG1-210ENST00000537360 2139 ntAPPRIS ALT1 TSL 1 (best) BASIC13.27□□□□□ -0.28
LRRTM1Q86UE6 TMPRSS2-202ENST00000398585 3240 ntTSL 2 BASIC13.27□□□□□ -0.28
LRRTM1Q86UE6 AC009690.1-201ENST00000379915 4374 ntAPPRIS P1 TSL 2 BASIC13.27□□□□□ -0.28
LRRTM1Q86UE6 CLEC16A-202ENST00000409552 3365 ntTSL 1 (best) BASIC13.27□□□□□ -0.28
LRRTM1Q86UE6 DLGAP1-213ENST00000534970 2365 ntTSL 2 BASIC13.27□□□□□ -0.29
LRRTM1Q86UE6 ELOF1-201ENST00000252445 1019 ntAPPRIS P1 TSL 2 BASIC13.27□□□□□ -0.29
LRRTM1Q86UE6 FCN2-201ENST00000291744 1057 ntAPPRIS P2 TSL 1 (best) BASIC13.27□□□□□ -0.29
LRRTM1Q86UE6 PDSS2-201ENST00000369031 1236 ntTSL 1 (best) BASIC13.27□□□□□ -0.29
LRRTM1Q86UE6 CAPG-203ENST00000409670 1183 ntAPPRIS P1 TSL 5 BASIC13.27□□□□□ -0.29
LRRTM1Q86UE6 MCCD1P2-201ENST00000423228 335 ntBASIC13.27□□□□□ -0.29
LRRTM1Q86UE6 ZNF337-AS1-204ENST00000428254 817 ntTSL 5 BASIC13.27□□□□□ -0.29
LRRTM1Q86UE6 PTGES3-204ENST00000448157 1017 ntTSL 2 BASIC13.27□□□□□ -0.29
LRRTM1Q86UE6 PTPRVP-202ENST00000490575 953 ntTSL 5 BASIC13.27□□□□□ -0.29
LRRTM1Q86UE6 AC091133.3-201ENST00000504865 432 ntTSL 5 BASIC13.27□□□□□ -0.29
LRRTM1Q86UE6 CNOT8-210ENST00000519404 945 ntTSL 2 BASIC13.27□□□□□ -0.29
LRRTM1Q86UE6 CNOT8-214ENST00000520671 923 ntTSL 2 BASIC13.27□□□□□ -0.29
LRRTM1Q86UE6 CNOT8-218ENST00000521583 1151 ntTSL 1 (best) BASIC13.27□□□□□ -0.29
LRRTM1Q86UE6 TMEM41B-203ENST00000527813 803 ntTSL 5 BASIC13.27□□□□□ -0.29
LRRTM1Q86UE6 OBP2A-206ENST00000539850 914 ntAPPRIS P1 TSL 5 BASIC13.27□□□□□ -0.29
LRRTM1Q86UE6 HEXIM2-206ENST00000591576 1176 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
LRRTM1Q86UE6 DEF8-228ENST00000610455 816 ntTSL 1 (best) BASIC13.27□□□□□ -0.29
LRRTM1Q86UE6 CUX1-215ENST00000556210 4044 ntAPPRIS ALT2 TSL 5 BASIC13.27□□□□□ -0.29
LRRTM1Q86UE6 CALB2-202ENST00000349553 1373 ntTSL 5 BASIC13.27□□□□□ -0.29
LRRTM1Q86UE6 CTSB-219ENST00000530640 1389 ntAPPRIS P1 TSL 5 BASIC13.27□□□□□ -0.29
LRRTM1Q86UE6 CD2BP2-203ENST00000569466 1417 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
LRRTM1Q86UE6 ACOT7-210ENST00000608083 1403 ntAPPRIS ALT2 TSL 1 (best) BASIC13.27□□□□□ -0.29
LRRTM1Q86UE6 C7orf49-201ENST00000393114 1482 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
LRRTM1Q86UE6 ATP6V0A1-203ENST00000393829 3028 ntTSL 1 (best) BASIC13.27□□□□□ -0.29
LRRTM1Q86UE6 CRCP-203ENST00000395326 3009 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
LRRTM1Q86UE6 DMTN-209ENST00000517600 1569 ntTSL 5 BASIC13.27□□□□□ -0.29
LRRTM1Q86UE6 SPATA6-204ENST00000396199 4964 ntTSL 2 BASIC13.27□□□□□ -0.29
LRRTM1Q86UE6 MFSD11-211ENST00000588460 3612 ntAPPRIS P1 TSL 2 BASIC13.27□□□□□ -0.29
LRRTM1Q86UE6 P2RX5-207ENST00000551178 1863 ntTSL 1 (best) BASIC13.27□□□□□ -0.29
LRRTM1Q86UE6 CASP2-207ENST00000619992 4006 ntTSL 1 (best) BASIC13.27□□□□□ -0.29
LRRTM1Q86UE6 CEP135-202ENST00000422247 2092 ntTSL 2 BASIC13.27□□□□□ -0.29
LRRTM1Q86UE6 KCNMA1-262ENST00000639489 4302 ntAPPRIS ALT2 TSL 5 BASIC13.27□□□□□ -0.29
LRRTM1Q86UE6 TPD52L2-206ENST00000358548 2275 ntTSL 2 BASIC13.27□□□□□ -0.29
LRRTM1Q86UE6 FES-202ENST00000394300 2302 ntTSL 1 (best) BASIC13.27□□□□□ -0.29
LRRTM1Q86UE6 ZNF655-212ENST00000424881 4666 ntAPPRIS ALT2 TSL 2 BASIC13.27□□□□□ -0.29
LRRTM1Q86UE6 AC004890.2-205ENST00000416232 2804 ntTSL 2 BASIC13.26□□□□□ -0.29
LRRTM1Q86UE6 ABCG1-205ENST00000398449 2998 ntAPPRIS ALT1 TSL 1 (best) BASIC13.26□□□□□ -0.29
LRRTM1Q86UE6 METTL13-202ENST00000362019 3022 ntTSL 2 BASIC13.26□□□□□ -0.29
LRRTM1Q86UE6 INO80-201ENST00000361937 6439 ntAPPRIS P1 TSL 5 BASIC13.26□□□□□ -0.29
LRRTM1Q86UE6 ST6GAL2-204ENST00000409382 7275 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
LRRTM1Q86UE6 PTPRN-201ENST00000295718 3784 ntAPPRIS P3 TSL 1 (best) BASIC13.26□□□□□ -0.29
LRRTM1Q86UE6 TGOLN2-203ENST00000398263 6138 ntAPPRIS ALT2 TSL 1 (best) BASIC13.26□□□□□ -0.29
LRRTM1Q86UE6 NOP9-201ENST00000267425 6033 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
LRRTM1Q86UE6 ALOX15-201ENST00000293761 2677 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
LRRTM1Q86UE6 FHL2-201ENST00000322142 1462 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
LRRTM1Q86UE6 ZKSCAN7-202ENST00000341840 1757 ntTSL 1 (best) BASIC13.26□□□□□ -0.29
LRRTM1Q86UE6 NFYA-202ENST00000353205 1660 ntTSL 5 BASIC13.26□□□□□ -0.29
LRRTM1Q86UE6 VILL-202ENST00000383759 2787 ntAPPRIS P1 TSL 5 BASIC13.26□□□□□ -0.29
LRRTM1Q86UE6 EXOSC3-202ENST00000396521 768 ntTSL 2 BASIC13.26□□□□□ -0.29
LRRTM1Q86UE6 RHOG-203ENST00000396979 1289 ntAPPRIS P1 TSL 3 BASIC13.26□□□□□ -0.29
LRRTM1Q86UE6 RNASE1-202ENST00000397967 1348 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
LRRTM1Q86UE6 FAM230B-201ENST00000415376 1859 ntTSL 2 BASIC13.26□□□□□ -0.29
LRRTM1Q86UE6 AL590627.1-203ENST00000421194 1026 ntBASIC13.26□□□□□ -0.29
LRRTM1Q86UE6 AC064807.1-202ENST00000423716 936 ntTSL 2 BASIC13.26□□□□□ -0.29
LRRTM1Q86UE6 PITPNA-AS1-201ENST00000425081 542 ntTSL 2 BASIC13.26□□□□□ -0.29
LRRTM1Q86UE6 AC124057.1-201ENST00000433035 404 ntTSL 5 BASIC13.26□□□□□ -0.29
LRRTM1Q86UE6 AC008079.1-201ENST00000434390 1859 ntTSL 5 BASIC13.26□□□□□ -0.29
LRRTM1Q86UE6 SNHG7-203ENST00000436596 509 ntTSL 2 BASIC13.26□□□□□ -0.29
LRRTM1Q86UE6 BCS1L-212ENST00000439945 1483 ntAPPRIS P1 TSL 5 BASIC13.26□□□□□ -0.29
LRRTM1Q86UE6 PSMB5-204ENST00000460922 729 ntTSL 2 BASIC13.26□□□□□ -0.29
LRRTM1Q86UE6 ZNF782-205ENST00000481138 4213 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
LRRTM1Q86UE6 AC092691.1-201ENST00000484092 554 ntTSL 4 BASIC13.26□□□□□ -0.29
LRRTM1Q86UE6 AC034213.1-201ENST00000507681 806 ntTSL 3 BASIC13.26□□□□□ -0.29
LRRTM1Q86UE6 AC106791.1-202ENST00000508281 1148 ntTSL 2 BASIC13.26□□□□□ -0.29
LRRTM1Q86UE6 AC009720.1-201ENST00000511867 586 ntTSL 2 BASIC13.26□□□□□ -0.29
LRRTM1Q86UE6 GATD1-206ENST00000526325 756 ntTSL 5 BASIC13.26□□□□□ -0.29
LRRTM1Q86UE6 RHOG-204ENST00000533217 886 ntAPPRIS P1 TSL 5 BASIC13.26□□□□□ -0.29
LRRTM1Q86UE6 ARMCX6-208ENST00000539247 1928 ntAPPRIS P1 TSL 4 BASIC13.26□□□□□ -0.29
LRRTM1Q86UE6 AL928654.4-206ENST00000551180 980 ntAPPRIS ALT2 TSL 5 BASIC13.26□□□□□ -0.29
LRRTM1Q86UE6 AC104758.3-201ENST00000563349 1453 ntTSL 1 (best) BASIC13.26□□□□□ -0.29
LRRTM1Q86UE6 SPINT1-AS1-202ENST00000564302 643 ntTSL 2 BASIC13.26□□□□□ -0.29
LRRTM1Q86UE6 FXYD1-208ENST00000589209 428 ntAPPRIS P1 TSL 5 BASIC13.26□□□□□ -0.29
LRRTM1Q86UE6 AC005523.2-201ENST00000601192 3568 ntTSL 4 BASIC13.26□□□□□ -0.29
LRRTM1Q86UE6 AL359881.3-201ENST00000602640 1721 ntBASIC13.26□□□□□ -0.29
LRRTM1Q86UE6 TP73-209ENST00000603362 1668 ntTSL 5 BASIC13.26□□□□□ -0.29
LRRTM1Q86UE6 AC011247.3-202ENST00000605062 570 ntTSL 4 BASIC13.26□□□□□ -0.29
LRRTM1Q86UE6 FXYD1-211ENST00000612146 690 ntAPPRIS P1 TSL 3 BASIC13.26□□□□□ -0.29
LRRTM1Q86UE6 AC003101.2-201ENST00000612557 442 ntBASIC13.26□□□□□ -0.29
LRRTM1Q86UE6 SIGLECL1-208ENST00000614422 1516 ntAPPRIS P3 TSL 1 (best) BASIC13.26□□□□□ -0.29
LRRTM1Q86UE6 FAM228B-210ENST00000615575 1357 ntAPPRIS P3 TSL 5 BASIC13.26□□□□□ -0.29
LRRTM1Q86UE6 NNAT-201ENST00000062104 1297 ntAPPRIS P4 TSL 1 (best) BASIC13.26□□□□□ -0.29
LRRTM1Q86UE6 CAND2-206ENST00000626378 333 ntTSL 5 BASIC13.26□□□□□ -0.29
LRRTM1Q86UE6 AC092506.1-201ENST00000634580 2275 ntTSL 5 BASIC13.26□□□□□ -0.29
LRRTM1Q86UE6 TAP2-201ENST00000374897 5684 ntAPPRIS P2 TSL 1 (best) BASIC13.26□□□□□ -0.29
LRRTM1Q86UE6 SELENON-203ENST00000374315 4212 ntAPPRIS ALT2 TSL 5 BASIC13.26□□□□□ -0.29
LRRTM1Q86UE6 ANK1-202ENST00000289734 8297 ntAPPRIS ALT2 TSL 1 (best) BASIC13.26□□□□□ -0.29
LRRTM1Q86UE6 GORASP2-201ENST00000234160 3173 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Retrieved 100 of 98,524 protein–RNA pairs in 49.5 ms