Protein–RNA interactions for Protein: Q7Z3V4

UBE3B, Ubiquitin-protein ligase E3B, humanhuman

Predictions only

Length 1,068 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UBE3BQ7Z3V4 ACOX3-202ENST00000413009 2374 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
UBE3BQ7Z3V4 SLC6A2-204ENST00000561820 2268 ntTSL 5 BASIC18.86■□□□□ 0.61
UBE3BQ7Z3V4 PNPLA5-202ENST00000381198 2000 ntTSL 2 BASIC18.86■□□□□ 0.61
UBE3BQ7Z3V4 PARD6G-201ENST00000353265 3868 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
UBE3BQ7Z3V4 IL1RN-203ENST00000361779 1922 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
UBE3BQ7Z3V4 HDHD3-201ENST00000238379 1834 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
UBE3BQ7Z3V4 ADCYAP1R1-204ENST00000409489 1761 ntTSL 5 BASIC18.86■□□□□ 0.61
UBE3BQ7Z3V4 OTUD6A-201ENST00000338352 1689 ntAPPRIS P1 BASIC18.86■□□□□ 0.61
UBE3BQ7Z3V4 SLC9A7P1-201ENST00000554295 3311 ntBASIC18.86■□□□□ 0.61
UBE3BQ7Z3V4 PSMC3-213ENST00000619920 1580 ntAPPRIS P2 TSL 1 (best) BASIC18.86■□□□□ 0.61
UBE3BQ7Z3V4 PGA5-201ENST00000312403 1519 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
UBE3BQ7Z3V4 SGCE-205ENST00000437425 1508 ntTSL 2 BASIC18.86■□□□□ 0.61
UBE3BQ7Z3V4 AC011840.2-201ENST00000563063 1520 ntBASIC18.86■□□□□ 0.61
UBE3BQ7Z3V4 HNRNPUL1-220ENST00000602130 2932 ntAPPRIS ALT2 TSL 1 (best) BASIC18.86■□□□□ 0.61
UBE3BQ7Z3V4 HARS-202ENST00000415192 1401 ntTSL 2 BASIC18.86■□□□□ 0.61
UBE3BQ7Z3V4 PPP3CA-207ENST00000512215 4007 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
UBE3BQ7Z3V4 GATA4-206ENST00000528712 2614 ntTSL 2 BASIC18.86■□□□□ 0.61
UBE3BQ7Z3V4 IQCA1L-203ENST00000615129 2606 ntAPPRIS P1 TSL 5 BASIC18.86■□□□□ 0.61
UBE3BQ7Z3V4 GPAA1P2-201ENST00000417923 928 ntBASIC18.86■□□□□ 0.61
UBE3BQ7Z3V4 NCK2-206ENST00000522586 490 ntTSL 5 BASIC18.86■□□□□ 0.61
UBE3BQ7Z3V4 TXNDC17-202ENST00000570330 459 ntTSL 2 BASIC18.86■□□□□ 0.61
UBE3BQ7Z3V4 AC004637.1-201ENST00000586675 482 ntTSL 3 BASIC18.86■□□□□ 0.61
UBE3BQ7Z3V4 IRF3-223ENST00000599223 1055 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
UBE3BQ7Z3V4 AL022328.3-201ENST00000607943 679 ntBASIC18.86■□□□□ 0.61
UBE3BQ7Z3V4 AC244157.2-201ENST00000616239 1006 ntBASIC18.86■□□□□ 0.61
UBE3BQ7Z3V4 AP001002.3-201ENST00000623482 206 ntBASIC18.86■□□□□ 0.61
UBE3BQ7Z3V4 CDK11B-209ENST00000629312 2496 ntTSL 5 BASIC18.86■□□□□ 0.61
UBE3BQ7Z3V4 KIAA1147-202ENST00000536163 7296 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
UBE3BQ7Z3V4 ODF2-202ENST00000372791 2375 ntAPPRIS P3 TSL 1 (best) BASIC18.86■□□□□ 0.61
UBE3BQ7Z3V4 DGKZ-205ENST00000456247 3482 ntAPPRIS ALT2 TSL 1 (best) BASIC18.86■□□□□ 0.61
UBE3BQ7Z3V4 EXOC7-213ENST00000467929 2260 ntTSL 2 BASIC18.86■□□□□ 0.61
UBE3BQ7Z3V4 KCMF1-201ENST00000409785 7568 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
UBE3BQ7Z3V4 RASGEF1A-204ENST00000395810 3235 ntAPPRIS P3 TSL 1 (best) BASIC18.86■□□□□ 0.61
UBE3BQ7Z3V4 RAI1-207ENST00000640861 5172 ntTSL 5 BASIC18.86■□□□□ 0.61
UBE3BQ7Z3V4 ADHFE1-203ENST00000396623 1990 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
UBE3BQ7Z3V4 INTS14-204ENST00000442903 1863 ntTSL 2 BASIC18.86■□□□□ 0.61
UBE3BQ7Z3V4 MBP-202ENST00000355994 2772 ntTSL 5 BASIC18.86■□□□□ 0.61
UBE3BQ7Z3V4 FOXRED1-213ENST00000532125 1825 ntAPPRIS ALT2 TSL 2 BASIC18.86■□□□□ 0.61
UBE3BQ7Z3V4 HNRNPR-212ENST00000606561 1837 ntTSL 2 BASIC18.86■□□□□ 0.61
UBE3BQ7Z3V4 CCNI2-204ENST00000614847 2642 ntAPPRIS ALT2 TSL 1 (best) BASIC18.86■□□□□ 0.61
UBE3BQ7Z3V4 CANX-201ENST00000247461 4260 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
UBE3BQ7Z3V4 AC091951.1-201ENST00000512854 2465 ntBASIC18.85■□□□□ 0.61
UBE3BQ7Z3V4 SERTM1-201ENST00000315190 3207 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
UBE3BQ7Z3V4 YARS-201ENST00000373477 3238 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
UBE3BQ7Z3V4 TMEM143-203ENST00000435956 2272 ntTSL 2 BASIC18.85■□□□□ 0.61
UBE3BQ7Z3V4 ABR-203ENST00000536794 2213 ntTSL 2 BASIC18.85■□□□□ 0.61
UBE3BQ7Z3V4 BET1L-201ENST00000325147 2916 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
UBE3BQ7Z3V4 ALPL-207ENST00000540617 2131 ntAPPRIS ALT2 TSL 2 BASIC18.85■□□□□ 0.61
UBE3BQ7Z3V4 VSIG10-202ENST00000359236 4946 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
UBE3BQ7Z3V4 KAT5-202ENST00000352980 2059 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
UBE3BQ7Z3V4 WDR45-224ENST00000485908 1301 ntTSL 5 BASIC18.85■□□□□ 0.61
UBE3BQ7Z3V4 SCYL1-214ENST00000533862 2570 ntTSL 5 BASIC18.85■□□□□ 0.61
UBE3BQ7Z3V4 CD19-201ENST00000324662 1932 ntAPPRIS P3 TSL 1 (best) BASIC18.85■□□□□ 0.61
UBE3BQ7Z3V4 NOSIP-201ENST00000339093 1000 ntAPPRIS ALT1 TSL 5 BASIC18.85■□□□□ 0.61
UBE3BQ7Z3V4 SETD4-205ENST00000399208 1165 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
UBE3BQ7Z3V4 AL136309.1-201ENST00000403917 691 ntBASIC18.85■□□□□ 0.61
UBE3BQ7Z3V4 MIR663B-201ENST00000408361 115 ntBASIC18.85■□□□□ 0.61
UBE3BQ7Z3V4 RN7SKP175-201ENST00000408472 289 ntBASIC18.85■□□□□ 0.61
UBE3BQ7Z3V4 KRTAP10-13P-201ENST00000412914 571 ntBASIC18.85■□□□□ 0.61
UBE3BQ7Z3V4 AL160290.2-201ENST00000448347 831 ntTSL 3 BASIC18.85■□□□□ 0.61
UBE3BQ7Z3V4 AL450003.2-201ENST00000450445 428 ntTSL 5 BASIC18.85■□□□□ 0.61
UBE3BQ7Z3V4 NIP7-208ENST00000569637 1099 ntTSL 2 BASIC18.85■□□□□ 0.61
UBE3BQ7Z3V4 DHRS7C-202ENST00000571134 984 ntAPPRIS ALT1 TSL 1 (best) BASIC18.85■□□□□ 0.61
UBE3BQ7Z3V4 LINC00479-204ENST00000589300 718 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
UBE3BQ7Z3V4 AC138696.2-201ENST00000607376 223 ntBASIC18.85■□□□□ 0.61
UBE3BQ7Z3V4 AP000229.1-202ENST00000609365 559 ntTSL 4 BASIC18.85■□□□□ 0.61
UBE3BQ7Z3V4 GLB1L2-201ENST00000339772 3152 ntAPPRIS P1 TSL 5 BASIC18.85■□□□□ 0.61
UBE3BQ7Z3V4 HIBCH-202ENST00000392332 2463 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
UBE3BQ7Z3V4 B3GAT1-201ENST00000312527 3652 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
UBE3BQ7Z3V4 CTPS2-201ENST00000359276 3629 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
UBE3BQ7Z3V4 SRSF12-201ENST00000452027 3599 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
UBE3BQ7Z3V4 FGD4-212ENST00000534526 2977 ntTSL 5 BASIC18.85■□□□□ 0.61
UBE3BQ7Z3V4 GSPT2-201ENST00000340438 2802 ntAPPRIS P1 BASIC18.85■□□□□ 0.61
UBE3BQ7Z3V4 WASHC2C-202ENST00000359860 4471 ntAPPRIS ALT2 TSL 5 BASIC18.85■□□□□ 0.61
UBE3BQ7Z3V4 LRIT1-201ENST00000372105 2228 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
UBE3BQ7Z3V4 AC023090.2-201ENST00000625182 2110 ntBASIC18.85■□□□□ 0.61
UBE3BQ7Z3V4 P2RX5-208ENST00000552050 1536 ntTSL 2 BASIC18.84■□□□□ 0.61
UBE3BQ7Z3V4 HCN1-201ENST00000303230 9885 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
UBE3BQ7Z3V4 PI4KAP1-201ENST00000610959 2425 ntTSL 2 BASIC18.84■□□□□ 0.61
UBE3BQ7Z3V4 ZNF32-AS3-201ENST00000458063 1932 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
UBE3BQ7Z3V4 ACTL7B-201ENST00000374667 2379 ntAPPRIS P1 BASIC18.84■□□□□ 0.61
UBE3BQ7Z3V4 TCP11L1-201ENST00000334274 2817 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
UBE3BQ7Z3V4 WDR1-202ENST00000382451 2722 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
UBE3BQ7Z3V4 GHDC-201ENST00000301671 2650 ntAPPRIS P1 TSL 2 BASIC18.84■□□□□ 0.61
UBE3BQ7Z3V4 NXN-210ENST00000575801 2681 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
UBE3BQ7Z3V4 AC013268.4-201ENST00000637413 2228 ntBASIC18.84■□□□□ 0.61
UBE3BQ7Z3V4 SH2B1-201ENST00000322610 3095 ntTSL 2 BASIC18.84■□□□□ 0.61
UBE3BQ7Z3V4 ZBTB46-201ENST00000245663 5185 ntAPPRIS P1 TSL 5 BASIC18.84■□□□□ 0.61
UBE3BQ7Z3V4 AC245123.1-202ENST00000612422 1719 ntTSL 5 BASIC18.84■□□□□ 0.61
UBE3BQ7Z3V4 C1orf123-201ENST00000294360 1085 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
UBE3BQ7Z3V4 GTSF1-201ENST00000305879 804 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
UBE3BQ7Z3V4 RHOC-206ENST00000369637 888 ntAPPRIS P1 TSL 3 BASIC18.84■□□□□ 0.61
UBE3BQ7Z3V4 NREP-204ENST00000419114 704 ntAPPRIS P1 TSL 2 BASIC18.84■□□□□ 0.61
UBE3BQ7Z3V4 ALG1L2-201ENST00000425059 969 ntAPPRIS P1 TSL 5 BASIC18.84■□□□□ 0.61
UBE3BQ7Z3V4 AC100850.1-201ENST00000506768 649 ntBASIC18.84■□□□□ 0.61
UBE3BQ7Z3V4 NEK11-210ENST00000510769 2149 ntTSL 2 BASIC18.84■□□□□ 0.61
UBE3BQ7Z3V4 FBXL8-208ENST00000521920 574 ntTSL 4 BASIC18.84■□□□□ 0.61
UBE3BQ7Z3V4 AL021546.1-201ENST00000551806 552 ntAPPRIS P1 TSL 3 BASIC18.84■□□□□ 0.61
UBE3BQ7Z3V4 AC129510.1-201ENST00000579979 555 ntTSL 3 BASIC18.84■□□□□ 0.61
UBE3BQ7Z3V4 ZEB1-AS1-208ENST00000607166 2503 ntBASIC18.84■□□□□ 0.61
Retrieved 100 of 98,524 protein–RNA pairs in 68.9 ms