Protein–RNA interactions for Protein: Q6P9H4

CNKSR3, Connector enhancer of kinase suppressor of ras 3, humanhuman

Predictions only

Length 555 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CNKSR3Q6P9H4 REC114-202ENST00000560581 833 ntAPPRIS ALT2 TSL 2 BASIC16.14■□□□□ 0.17
CNKSR3Q6P9H4 AC145207.3-201ENST00000576784 529 ntTSL 5 BASIC16.14■□□□□ 0.17
CNKSR3Q6P9H4 NAT9-220ENST00000582870 896 ntTSL 5 BASIC16.14■□□□□ 0.17
CNKSR3Q6P9H4 SLC1A6-208ENST00000598504 2987 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
CNKSR3Q6P9H4 AC138894.2-201ENST00000602838 371 ntBASIC16.14■□□□□ 0.17
CNKSR3Q6P9H4 AP001065.2-201ENST00000617205 644 ntBASIC16.14■□□□□ 0.17
CNKSR3Q6P9H4 MIR6769A-201ENST00000617340 73 ntBASIC16.14■□□□□ 0.17
CNKSR3Q6P9H4 AC242376.2-201ENST00000619355 883 ntBASIC16.14■□□□□ 0.17
CNKSR3Q6P9H4 IFI27-215ENST00000621160 644 ntAPPRIS P2 TSL 1 (best) BASIC16.14■□□□□ 0.17
CNKSR3Q6P9H4 ARL16-215ENST00000622299 1053 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
CNKSR3Q6P9H4 SCP2-217ENST00000640998 1101 ntTSL 5 BASIC16.14■□□□□ 0.17
CNKSR3Q6P9H4 PLCD3-212ENST00000619929 6107 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
CNKSR3Q6P9H4 HNRNPD-201ENST00000313899 3033 ntAPPRIS P4 TSL 1 (best) BASIC16.14■□□□□ 0.17
CNKSR3Q6P9H4 AC107871.1-202ENST00000562767 3389 ntAPPRIS P1 TSL 3 BASIC16.14■□□□□ 0.17
CNKSR3Q6P9H4 NSUN5P1-206ENST00000457988 1836 ntTSL 2 BASIC16.14■□□□□ 0.17
CNKSR3Q6P9H4 MAN1C1-203ENST00000374332 4641 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
CNKSR3Q6P9H4 MAN1C1-208ENST00000611903 4647 ntTSL 5 BASIC16.14■□□□□ 0.17
CNKSR3Q6P9H4 ELAVL2-208ENST00000544538 3789 ntAPPRIS P3 TSL 5 BASIC16.14■□□□□ 0.17
CNKSR3Q6P9H4 AC025165.1-201ENST00000356672 2355 ntTSL 5 BASIC16.14■□□□□ 0.17
CNKSR3Q6P9H4 NR4A3-202ENST00000338488 2588 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
CNKSR3Q6P9H4 PCDHA1-203ENST00000504120 5263 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
CNKSR3Q6P9H4 AC099398.1-201ENST00000567919 2776 ntBASIC16.14■□□□□ 0.17
CNKSR3Q6P9H4 POLL-204ENST00000370168 1536 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
CNKSR3Q6P9H4 DLEU2-201ENST00000235290 1739 ntTSL 5 BASIC16.14■□□□□ 0.17
CNKSR3Q6P9H4 MUC20-201ENST00000320736 1916 ntAPPRIS ALT2 TSL 5 BASIC16.13■□□□□ 0.17
CNKSR3Q6P9H4 UBL7-201ENST00000361351 1360 ntAPPRIS P1 TSL 5 BASIC16.13■□□□□ 0.17
CNKSR3Q6P9H4 AGER-201ENST00000375055 1369 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
CNKSR3Q6P9H4 LINC00334-203ENST00000638500 1377 ntTSL 5 BASIC16.13■□□□□ 0.17
CNKSR3Q6P9H4 ARFIP1-204ENST00000429148 1599 ntTSL 2 BASIC16.13■□□□□ 0.17
CNKSR3Q6P9H4 SERPINE2-202ENST00000409304 2161 ntAPPRIS ALT1 TSL 1 (best) BASIC16.13■□□□□ 0.17
CNKSR3Q6P9H4 MMP2-201ENST00000219070 3741 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
CNKSR3Q6P9H4 VRK3-207ENST00000594092 1831 ntAPPRIS ALT2 TSL 1 (best) BASIC16.13■□□□□ 0.17
CNKSR3Q6P9H4 ACP2-201ENST00000256997 2203 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
CNKSR3Q6P9H4 UBE2D1-204ENST00000615793 2621 ntTSL 2 BASIC16.13■□□□□ 0.17
CNKSR3Q6P9H4 SMIM29-202ENST00000394990 792 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
CNKSR3Q6P9H4 AL139339.1-201ENST00000411906 657 ntTSL 2 BASIC16.13■□□□□ 0.17
CNKSR3Q6P9H4 AL592076.1-201ENST00000424448 303 ntBASIC16.13■□□□□ 0.17
CNKSR3Q6P9H4 LINC00431-201ENST00000440735 1189 ntTSL 5 BASIC16.13■□□□□ 0.17
CNKSR3Q6P9H4 AL035414.1-201ENST00000451327 857 ntBASIC16.13■□□□□ 0.17
CNKSR3Q6P9H4 ZNF124-204ENST00000491356 956 ntTSL 2 BASIC16.13■□□□□ 0.17
CNKSR3Q6P9H4 KLF3-AS1-204ENST00000505240 567 ntTSL 4 BASIC16.13■□□□□ 0.17
CNKSR3Q6P9H4 ENDOV-229ENST00000523999 864 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
CNKSR3Q6P9H4 EIF3K-202ENST00000538434 966 ntTSL 2 BASIC16.13■□□□□ 0.17
CNKSR3Q6P9H4 FKBP11-212ENST00000552878 1052 ntAPPRIS ALT2 TSL 2 BASIC16.13■□□□□ 0.17
CNKSR3Q6P9H4 DNM1P30-201ENST00000563586 452 ntBASIC16.13■□□□□ 0.17
CNKSR3Q6P9H4 MIR3677-201ENST00000578964 60 ntBASIC16.13■□□□□ 0.17
CNKSR3Q6P9H4 BX088702.1-201ENST00000610784 235 ntBASIC16.13■□□□□ 0.17
CNKSR3Q6P9H4 MEG3_2.1-201ENST00000611456 105 ntBASIC16.13■□□□□ 0.17
CNKSR3Q6P9H4 HIST1H3C-201ENST00000612966 411 ntAPPRIS P1 BASIC16.13■□□□□ 0.17
CNKSR3Q6P9H4 MUC1-226ENST00000614519 1093 ntTSL 2 BASIC16.13■□□□□ 0.17
CNKSR3Q6P9H4 KLF3-AS1-207ENST00000620339 558 ntTSL 4 BASIC16.13■□□□□ 0.17
CNKSR3Q6P9H4 CYP4B1-215ENST00000640628 969 ntTSL 5 BASIC16.13■□□□□ 0.17
CNKSR3Q6P9H4 C21orf33-201ENST00000291577 1674 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
CNKSR3Q6P9H4 EPB41L5-203ENST00000443124 2872 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
CNKSR3Q6P9H4 LINC01979-201ENST00000576738 5271 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
CNKSR3Q6P9H4 H1F0-201ENST00000340857 2344 ntAPPRIS P1 BASIC16.13■□□□□ 0.17
CNKSR3Q6P9H4 SEMA5B-202ENST00000357599 4792 ntAPPRIS P3 TSL 1 (best) BASIC16.13■□□□□ 0.17
CNKSR3Q6P9H4 GNB2-202ENST00000393924 1524 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
CNKSR3Q6P9H4 TMEM40-204ENST00000435218 1547 ntAPPRIS ALT2 TSL 1 (best) BASIC16.13■□□□□ 0.17
CNKSR3Q6P9H4 TEX28-203ENST00000617225 1525 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
CNKSR3Q6P9H4 AC245100.1-201ENST00000452996 1331 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
CNKSR3Q6P9H4 TSC2-204ENST00000401874 5421 ntAPPRIS ALT2 TSL 1 (best) BASIC16.13■□□□□ 0.17
CNKSR3Q6P9H4 ZFP3-201ENST00000318833 5206 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
CNKSR3Q6P9H4 RUSC1-203ENST00000368349 1968 ntAPPRIS P3 TSL 1 (best) BASIC16.13■□□□□ 0.17
CNKSR3Q6P9H4 RARA-206ENST00000425707 3041 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
CNKSR3Q6P9H4 ZMYND12-201ENST00000372565 1775 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
CNKSR3Q6P9H4 ARL14EP-201ENST00000282032 2430 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
CNKSR3Q6P9H4 HNRNPR-212ENST00000606561 1837 ntTSL 2 BASIC16.12■□□□□ 0.17
CNKSR3Q6P9H4 TUBB4B-201ENST00000340384 1637 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
CNKSR3Q6P9H4 ARHGAP27-208ENST00000528384 2296 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
CNKSR3Q6P9H4 PDZD8-201ENST00000334464 9699 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
CNKSR3Q6P9H4 GCNT7-201ENST00000243913 2064 ntTSL 2 BASIC16.12■□□□□ 0.17
CNKSR3Q6P9H4 SYBU-219ENST00000528647 2995 ntAPPRIS P4 TSL 2 BASIC16.12■□□□□ 0.17
CNKSR3Q6P9H4 ST3GAL6-214ENST00000483910 1886 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
CNKSR3Q6P9H4 AL359258.3-201ENST00000622910 2331 ntBASIC16.12■□□□□ 0.17
CNKSR3Q6P9H4 AC144522.1-201ENST00000625111 1658 ntBASIC16.12■□□□□ 0.17
CNKSR3Q6P9H4 MAP3K20-203ENST00000409176 2572 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
CNKSR3Q6P9H4 KCNMA1-201ENST00000286627 6194 ntAPPRIS P3 TSL 1 (best) BASIC16.12■□□□□ 0.17
CNKSR3Q6P9H4 IQSEC2-202ENST00000396435 6015 ntAPPRIS ALT2 TSL 1 (best) BASIC16.12■□□□□ 0.17
CNKSR3Q6P9H4 TMSB10-201ENST00000233143 496 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
CNKSR3Q6P9H4 BX284668.5-201ENST00000422124 406 ntTSL 2 BASIC16.12■□□□□ 0.17
CNKSR3Q6P9H4 PFN2-202ENST00000423691 911 ntTSL 2 BASIC16.12■□□□□ 0.17
CNKSR3Q6P9H4 SAP30L-203ENST00000440364 792 ntTSL 3 BASIC16.12■□□□□ 0.17
CNKSR3Q6P9H4 UBXN7-AS1-201ENST00000442941 386 ntTSL 3 BASIC16.12■□□□□ 0.17
CNKSR3Q6P9H4 LINC00461-207ENST00000506978 564 ntTSL 5 BASIC16.12■□□□□ 0.17
CNKSR3Q6P9H4 NAPSB-201ENST00000525179 678 ntTSL 3 BASIC16.12■□□□□ 0.17
CNKSR3Q6P9H4 IFITM1-204ENST00000528780 730 ntAPPRIS P1 TSL 3 BASIC16.12■□□□□ 0.17
CNKSR3Q6P9H4 FAM104A-206ENST00000583024 417 ntTSL 3 BASIC16.12■□□□□ 0.17
CNKSR3Q6P9H4 AC111170.1-201ENST00000591110 1132 ntTSL 3 BASIC16.12■□□□□ 0.17
CNKSR3Q6P9H4 CR589904.1-202ENST00000611154 660 ntTSL 5 BASIC16.12■□□□□ 0.17
CNKSR3Q6P9H4 MIR6842-201ENST00000612539 65 ntBASIC16.12■□□□□ 0.17
CNKSR3Q6P9H4 AC024941.2-201ENST00000625763 493 ntTSL 2 BASIC16.12■□□□□ 0.17
CNKSR3Q6P9H4 CLUH-201ENST00000435359 5224 ntAPPRIS P2 TSL 5 BASIC16.12■□□□□ 0.17
CNKSR3Q6P9H4 NFATC2-205ENST00000609507 2662 ntAPPRIS ALT2 TSL 1 (best) BASIC16.12■□□□□ 0.17
CNKSR3Q6P9H4 ASB1-201ENST00000264607 6994 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
CNKSR3Q6P9H4 RUNX1-203ENST00000358356 2720 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
CNKSR3Q6P9H4 ZNF710-201ENST00000268154 4617 ntAPPRIS P1 TSL 2 BASIC16.12■□□□□ 0.17
CNKSR3Q6P9H4 RAB1A-204ENST00000409892 2254 ntTSL 2 BASIC16.12■□□□□ 0.17
CNKSR3Q6P9H4 CASP6-202ENST00000352981 1347 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
CNKSR3Q6P9H4 ARHGEF40-201ENST00000298694 5919 ntAPPRIS P1 TSL 2 BASIC16.12■□□□□ 0.17
Retrieved 100 of 98,524 protein–RNA pairs in 101.2 ms