Protein–RNA interactions for Protein: Q6P9A3

ZNF549, Zinc finger protein 549, humanhuman

Predictions only

Length 640 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF549Q6P9A3 AC015712.4-202ENST00000558641 1007 ntTSL 4 BASIC15.14■□□□□ 0.01
ZNF549Q6P9A3 SECTM1-202ENST00000580437 1030 ntAPPRIS ALT2 TSL 2 BASIC15.14■□□□□ 0.01
ZNF549Q6P9A3 OR2V1-205ENST00000642036 2609 ntAPPRIS P1 BASIC15.14■□□□□ 0.01
ZNF549Q6P9A3 PIGT-202ENST00000279036 2245 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
ZNF549Q6P9A3 PHLDB1-223ENST00000600882 5479 ntAPPRIS P3 TSL 1 (best) BASIC15.14■□□□□ 0.01
ZNF549Q6P9A3 REEP3-201ENST00000373758 5205 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
ZNF549Q6P9A3 GPC3-202ENST00000394299 2379 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
ZNF549Q6P9A3 DARS-AS1-209ENST00000594219 1420 ntTSL 5 BASIC15.14■□□□□ 0.01
ZNF549Q6P9A3 CPEB2-209ENST00000538197 6878 ntAPPRIS P4 TSL 5 BASIC15.14■□□□□ 0.01
ZNF549Q6P9A3 SLC17A5-201ENST00000355773 3455 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
ZNF549Q6P9A3 EML4-201ENST00000318522 5549 ntAPPRIS P3 TSL 1 (best) BASIC15.14■□□□□ 0.01
ZNF549Q6P9A3 AC025674.2-201ENST00000522622 2971 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
ZNF549Q6P9A3 RABIF-201ENST00000367262 2430 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
ZNF549Q6P9A3 MAP1S-201ENST00000324096 3419 ntAPPRIS P3 TSL 1 (best) BASIC15.14■□□□□ 0.01
ZNF549Q6P9A3 PAK2-201ENST00000327134 6139 ntAPPRIS P1 TSL 2 BASIC15.14■□□□□ 0.01
ZNF549Q6P9A3 RSPO1-204ENST00000615459 2331 ntTSL 2 BASIC15.14■□□□□ 0.01
ZNF549Q6P9A3 TGFB1I1-201ENST00000361773 1773 ntAPPRIS P3 TSL 1 (best) BASIC15.13■□□□□ 0.01
ZNF549Q6P9A3 TDRD10-201ENST00000368480 1776 ntAPPRIS ALT2 TSL 2 BASIC15.13■□□□□ 0.01
ZNF549Q6P9A3 GRK6-203ENST00000393576 2792 ntTSL 5 BASIC15.13■□□□□ 0.01
ZNF549Q6P9A3 SYBU-208ENST00000440310 3072 ntAPPRIS ALT2 TSL 5 BASIC15.13■□□□□ 0.01
ZNF549Q6P9A3 RTP1-201ENST00000312295 2217 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
ZNF549Q6P9A3 CDH16-207ENST00000568632 2526 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
ZNF549Q6P9A3 SALL3-201ENST00000536229 3997 ntTSL 3 BASIC15.13■□□□□ 0.01
ZNF549Q6P9A3 IDH2-201ENST00000330062 2694 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
ZNF549Q6P9A3 CLEC16A-203ENST00000409790 6891 ntAPPRIS P1 TSL 5 BASIC15.13■□□□□ 0.01
ZNF549Q6P9A3 ACHE-202ENST00000302913 2956 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
ZNF549Q6P9A3 SEMA5B-206ENST00000451055 4579 ntAPPRIS ALT2 TSL 2 BASIC15.13■□□□□ 0.01
ZNF549Q6P9A3 SDK1-210ENST00000615806 10258 ntAPPRIS ALT2 TSL 5 BASIC15.13■□□□□ 0.01
ZNF549Q6P9A3 CYB561A3-203ENST00000447532 1803 ntTSL 5 BASIC15.13■□□□□ 0.01
ZNF549Q6P9A3 PDRG1-201ENST00000202017 1998 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
ZNF549Q6P9A3 TK2-221ENST00000620035 5060 ntTSL 2 BASIC15.13■□□□□ 0.01
ZNF549Q6P9A3 STK40-204ENST00000373132 3621 ntAPPRIS P3 TSL 1 (best) BASIC15.13■□□□□ 0.01
ZNF549Q6P9A3 CDS2-203ENST00000460006 9298 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
ZNF549Q6P9A3 H2BFWT-201ENST00000217926 894 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
ZNF549Q6P9A3 AGPAT1-201ENST00000336984 2021 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
ZNF549Q6P9A3 ARHGAP4-202ENST00000370016 3095 ntAPPRIS ALT2 TSL 5 BASIC15.13■□□□□ 0.01
ZNF549Q6P9A3 CCDC22-201ENST00000376227 2319 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
ZNF549Q6P9A3 NAP1L1-202ENST00000393263 1896 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
ZNF549Q6P9A3 AC098850.1-201ENST00000419919 790 ntBASIC15.13■□□□□ 0.01
ZNF549Q6P9A3 MEP1AP4-201ENST00000423244 1087 ntBASIC15.13■□□□□ 0.01
ZNF549Q6P9A3 RBAKDN-201ENST00000498308 514 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
ZNF549Q6P9A3 AC093004.1-201ENST00000508850 424 ntBASIC15.13■□□□□ 0.01
ZNF549Q6P9A3 AC009686.1-201ENST00000522494 364 ntTSL 3 BASIC15.13■□□□□ 0.01
ZNF549Q6P9A3 LINC01605-204ENST00000522718 1093 ntTSL 3 BASIC15.13■□□□□ 0.01
ZNF549Q6P9A3 AC091544.3-201ENST00000556424 531 ntTSL 2 BASIC15.13■□□□□ 0.01
ZNF549Q6P9A3 RRP7BP-205ENST00000566851 833 ntBASIC15.13■□□□□ 0.01
ZNF549Q6P9A3 LINC01975-201ENST00000571890 549 ntTSL 4 BASIC15.13■□□□□ 0.01
ZNF549Q6P9A3 AC067852.1-201ENST00000585572 594 ntTSL 4 BASIC15.13■□□□□ 0.01
ZNF549Q6P9A3 ZBTB7C-204ENST00000586438 4899 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
ZNF549Q6P9A3 ERCC1-212ENST00000591636 836 ntTSL 2 BASIC15.13■□□□□ 0.01
ZNF549Q6P9A3 AC005785.1-202ENST00000597164 237 ntTSL 3 BASIC15.13■□□□□ 0.01
ZNF549Q6P9A3 AC099568.2-201ENST00000609194 695 ntBASIC15.13■□□□□ 0.01
ZNF549Q6P9A3 MAGEA2-209ENST00000623806 2025 ntAPPRIS P1 TSL 2 BASIC15.13■□□□□ 0.01
ZNF549Q6P9A3 AL356481.3-201ENST00000630523 575 ntTSL 5 BASIC15.13■□□□□ 0.01
ZNF549Q6P9A3 AC092506.1-204ENST00000634888 1066 ntTSL 5 BASIC15.13■□□□□ 0.01
ZNF549Q6P9A3 PRF1-203ENST00000638674 1080 ntTSL 5 BASIC15.13■□□□□ 0.01
ZNF549Q6P9A3 COL25A1-201ENST00000399126 2674 ntAPPRIS ALT2 TSL 5 BASIC15.13■□□□□ 0.01
ZNF549Q6P9A3 SARM1-208ENST00000585482 10309 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
ZNF549Q6P9A3 MTHFR-210ENST00000641407 2387 ntBASIC15.13■□□□□ 0.01
ZNF549Q6P9A3 PDGFRL-201ENST00000251630 1901 ntAPPRIS P1 TSL 5 BASIC15.13■□□□□ 0.01
ZNF549Q6P9A3 TMEM201-202ENST00000340381 3776 ntAPPRIS P1 TSL 5 BASIC15.13■□□□□ 0.01
ZNF549Q6P9A3 ZNF772-202ENST00000356584 1799 ntAPPRIS ALT2 TSL 2 BASIC15.13■□□□□ 0.01
ZNF549Q6P9A3 TBP-207ENST00000616883 1750 ntAPPRIS ALT2 TSL 5 BASIC15.13■□□□□ 0.01
ZNF549Q6P9A3 E2F6-212ENST00000546212 3191 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
ZNF549Q6P9A3 LINC02395-201ENST00000546821 3157 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
ZNF549Q6P9A3 FBP1-203ENST00000415431 1487 ntAPPRIS P1 TSL 2 BASIC15.13■□□□□ 0.01
ZNF549Q6P9A3 AMPD2-218ENST00000528454 2728 ntTSL 2 BASIC15.13■□□□□ 0.01
ZNF549Q6P9A3 BMP1-203ENST00000354870 3989 ntTSL 5 BASIC15.13■□□□□ 0.01
ZNF549Q6P9A3 OSBPL10-201ENST00000396556 6600 ntAPPRIS P3 TSL 1 (best) BASIC15.13■□□□□ 0.01
ZNF549Q6P9A3 ZMYND15-204ENST00000573751 2409 ntTSL 2 BASIC15.13■□□□□ 0.01
ZNF549Q6P9A3 AQP1-201ENST00000311813 2913 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
ZNF549Q6P9A3 RTN3-205ENST00000356000 2645 ntTSL 2 BASIC15.13■□□□□ 0.01
ZNF549Q6P9A3 SCLT1-209ENST00000511426 1696 ntAPPRIS ALT2 TSL 1 (best) BASIC15.12■□□□□ 0.01
ZNF549Q6P9A3 AK4-202ENST00000395334 6998 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
ZNF549Q6P9A3 AC140479.7-201ENST00000636301 2332 ntBASIC15.12■□□□□ 0.01
ZNF549Q6P9A3 KLHL26-201ENST00000300976 4407 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
ZNF549Q6P9A3 B4GALNT3-201ENST00000266383 5068 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
ZNF549Q6P9A3 FGD1-201ENST00000375135 4275 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
ZNF549Q6P9A3 YPEL1-201ENST00000339468 4329 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
ZNF549Q6P9A3 ELF2-202ENST00000379549 3005 ntTSL 2 BASIC15.12■□□□□ 0.01
ZNF549Q6P9A3 AP1M1-211ENST00000590756 1705 ntTSL 5 BASIC15.12■□□□□ 0.01
ZNF549Q6P9A3 UBTF-204ENST00000436088 2738 ntAPPRIS P1 TSL 2 BASIC15.12■□□□□ 0.01
ZNF549Q6P9A3 CECR7-202ENST00000441006 2726 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
ZNF549Q6P9A3 NACC1-201ENST00000292431 4445 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
ZNF549Q6P9A3 ALDOA-228ENST00000627059 2402 ntAPPRIS ALT1 TSL 5 BASIC15.12■□□□□ 0.01
ZNF549Q6P9A3 SUCO-204ENST00000608151 5790 ntTSL 5 BASIC15.12■□□□□ 0.01
ZNF549Q6P9A3 ADAMTS14-202ENST00000373208 5269 ntAPPRIS P4 TSL 2 BASIC15.12■□□□□ 0.01
ZNF549Q6P9A3 HNRNPDL-208ENST00000621267 4139 ntAPPRIS P2 TSL 1 (best) BASIC15.12■□□□□ 0.01
ZNF549Q6P9A3 ADAMTS15-201ENST00000299164 5673 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
ZNF549Q6P9A3 SPEG-201ENST00000312358 10782 ntAPPRIS P1 TSL 5 BASIC15.12■□□□□ 0.01
ZNF549Q6P9A3 CXorf40A-201ENST00000359293 974 ntAPPRIS P3 TSL 2 BASIC15.12■□□□□ 0.01
ZNF549Q6P9A3 MRPL55-215ENST00000366742 630 ntAPPRIS P1 TSL 2 BASIC15.12■□□□□ 0.01
ZNF549Q6P9A3 MORN4-202ENST00000370635 419 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
ZNF549Q6P9A3 C10orf62-201ENST00000370640 1208 ntAPPRIS P1 BASIC15.12■□□□□ 0.01
ZNF549Q6P9A3 DBNDD2-208ENST00000372723 1118 ntAPPRIS P1 TSL 2 BASIC15.12■□□□□ 0.01
ZNF549Q6P9A3 METTL26-204ENST00000397665 558 ntTSL 2 BASIC15.12■□□□□ 0.01
ZNF549Q6P9A3 GABARAPL1-202ENST00000421801 855 ntTSL 2 BASIC15.12■□□□□ 0.01
ZNF549Q6P9A3 AC073133.1-201ENST00000426187 432 ntTSL 3 BASIC15.12■□□□□ 0.01
ZNF549Q6P9A3 TREX1-201ENST00000433541 1105 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
ZNF549Q6P9A3 LHFPL2-207ENST00000515007 4680 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Retrieved 100 of 98,524 protein–RNA pairs in 36.4 ms