Protein–RNA interactions for Protein: Q5VT25

CDC42BPA, Serine/threonine-protein kinase MRCK alpha, humanhuman

Predictions only

Length 1,732 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42BPAQ5VT25 TIRAP-203ENST00000392680 2068 ntAPPRIS P1 TSL 1 (best) BASIC22.35■■□□□ 1.17
CDC42BPAQ5VT25 TNFAIP2-209ENST00000560869 4683 ntAPPRIS P1 TSL 5 BASIC22.35■■□□□ 1.17
CDC42BPAQ5VT25 NOP2-222ENST00000617555 2017 ntTSL 5 BASIC22.35■■□□□ 1.17
CDC42BPAQ5VT25 BRF1-206ENST00000446501 2858 ntTSL 2 BASIC22.35■■□□□ 1.17
CDC42BPAQ5VT25 MIR137HG-202ENST00000424528 2639 ntTSL 2 BASIC22.35■■□□□ 1.17
CDC42BPAQ5VT25 KCNQ1-201ENST00000155840 3245 ntAPPRIS P2 TSL 1 (best) BASIC22.35■■□□□ 1.17
CDC42BPAQ5VT25 PLAC8L1-201ENST00000311450 638 ntAPPRIS P1 TSL 1 (best) BASIC22.35■■□□□ 1.17
CDC42BPAQ5VT25 Metazoa_SRP.6-201ENST00000366384 298 ntBASIC22.35■■□□□ 1.17
CDC42BPAQ5VT25 NSUN5P1-203ENST00000422386 972 ntTSL 1 (best) BASIC22.35■■□□□ 1.17
CDC42BPAQ5VT25 TREX1-202ENST00000444177 1200 ntTSL 1 (best) BASIC22.35■■□□□ 1.17
CDC42BPAQ5VT25 OR2T27-202ENST00000460972 1136 ntAPPRIS P1 BASIC22.35■■□□□ 1.17
CDC42BPAQ5VT25 AC011500.3-201ENST00000594676 647 ntTSL 4 BASIC22.35■■□□□ 1.17
CDC42BPAQ5VT25 EAF1-AS1-208ENST00000608408 770 ntTSL 5 BASIC22.35■■□□□ 1.17
CDC42BPAQ5VT25 AL161773.1-201ENST00000624845 863 ntBASIC22.35■■□□□ 1.17
CDC42BPAQ5VT25 LINC00969-294ENST00000627609 992 ntTSL 5 BASIC22.35■■□□□ 1.17
CDC42BPAQ5VT25 CASD1-201ENST00000297273 3942 ntAPPRIS P1 TSL 1 (best) BASIC22.35■■□□□ 1.17
CDC42BPAQ5VT25 PCDH8-202ENST00000377942 5088 ntAPPRIS P4 TSL 1 (best) BASIC22.35■■□□□ 1.17
CDC42BPAQ5VT25 MARK2P16-201ENST00000605714 1723 ntBASIC22.35■■□□□ 1.17
CDC42BPAQ5VT25 AIDA-201ENST00000340020 3008 ntAPPRIS P1 TSL 1 (best) BASIC22.35■■□□□ 1.17
CDC42BPAQ5VT25 F10-203ENST00000409306 1450 ntTSL 3 BASIC22.35■■□□□ 1.17
CDC42BPAQ5VT25 GPSM3-209ENST00000487761 1460 ntTSL 5 BASIC22.35■■□□□ 1.17
CDC42BPAQ5VT25 C1QTNF9-201ENST00000332018 1830 ntAPPRIS P1 TSL 1 (best) BASIC22.35■■□□□ 1.17
CDC42BPAQ5VT25 TFB2M-201ENST00000366514 1848 ntAPPRIS P1 TSL 1 (best) BASIC22.35■■□□□ 1.17
CDC42BPAQ5VT25 ODF2L-204ENST00000370566 2155 ntAPPRIS P1 TSL 2 BASIC22.35■■□□□ 1.17
CDC42BPAQ5VT25 SUV39H1-202ENST00000376687 2871 ntAPPRIS P1 TSL 1 (best) BASIC22.35■■□□□ 1.17
CDC42BPAQ5VT25 AC026992.2-202ENST00000565312 1934 ntTSL 5 BASIC22.35■■□□□ 1.17
CDC42BPAQ5VT25 TSEN2-201ENST00000284995 2381 ntAPPRIS P1 TSL 1 (best) BASIC22.35■■□□□ 1.17
CDC42BPAQ5VT25 PDP1-203ENST00000517764 2140 ntAPPRIS P3 TSL 2 BASIC22.35■■□□□ 1.17
CDC42BPAQ5VT25 LRIF1-202ENST00000485275 1796 ntAPPRIS ALT2 TSL 2 BASIC22.35■■□□□ 1.17
CDC42BPAQ5VT25 PAK1-210ENST00000528203 1878 ntTSL 2 BASIC22.35■■□□□ 1.17
CDC42BPAQ5VT25 TMPRSS4-211ENST00000522307 1634 ntTSL 2 BASIC22.34■■□□□ 1.17
CDC42BPAQ5VT25 FBXL21-202ENST00000467490 1742 ntTSL 1 (best) BASIC22.34■■□□□ 1.17
CDC42BPAQ5VT25 MAGOH-202ENST00000371470 756 ntAPPRIS P1 TSL 1 (best) BASIC22.34■■□□□ 1.17
CDC42BPAQ5VT25 RN7SL277P-201ENST00000481521 288 ntBASIC22.34■■□□□ 1.17
CDC42BPAQ5VT25 AC040162.4-201ENST00000574912 1185 ntAPPRIS P1 TSL 3 BASIC22.34■■□□□ 1.17
CDC42BPAQ5VT25 SLC35G3-201ENST00000297307 2004 ntAPPRIS P1 BASIC22.34■■□□□ 1.17
CDC42BPAQ5VT25 ZNF165-201ENST00000377325 2107 ntAPPRIS P1 TSL 1 (best) BASIC22.34■■□□□ 1.17
CDC42BPAQ5VT25 RUFY1-204ENST00000437570 2642 ntAPPRIS ALT2 TSL 2 BASIC22.34■■□□□ 1.17
CDC42BPAQ5VT25 PNPLA5-204ENST00000593866 2197 ntTSL 2 BASIC22.34■■□□□ 1.17
CDC42BPAQ5VT25 MBP-204ENST00000382582 2281 ntTSL 1 (best) BASIC22.34■■□□□ 1.17
CDC42BPAQ5VT25 AC009093.10-201ENST00000641956 1442 ntBASIC22.34■■□□□ 1.17
CDC42BPAQ5VT25 CTSO-201ENST00000433477 2954 ntAPPRIS P1 TSL 1 (best) BASIC22.34■■□□□ 1.17
CDC42BPAQ5VT25 VPS16-203ENST00000380469 2318 ntTSL 2 BASIC22.34■■□□□ 1.17
CDC42BPAQ5VT25 FERD3L-201ENST00000275461 640 ntAPPRIS P1 BASIC22.34■■□□□ 1.17
CDC42BPAQ5VT25 HPGD-203ENST00000422112 805 ntTSL 2 BASIC22.34■■□□□ 1.17
CDC42BPAQ5VT25 GAS5-209ENST00000430245 723 ntTSL 3 BASIC22.34■■□□□ 1.17
CDC42BPAQ5VT25 AC012362.1-201ENST00000434906 739 ntBASIC22.34■■□□□ 1.17
CDC42BPAQ5VT25 AC018463.1-201ENST00000456674 917 ntBASIC22.34■■□□□ 1.17
CDC42BPAQ5VT25 AC145207.8-201ENST00000580897 563 ntTSL 4 BASIC22.34■■□□□ 1.17
CDC42BPAQ5VT25 MIR22HG-201ENST00000334146 1383 ntTSL 1 (best) BASIC22.34■■□□□ 1.17
CDC42BPAQ5VT25 EDNRB-204ENST00000626030 1571 ntTSL 1 (best) BASIC22.34■■□□□ 1.17
CDC42BPAQ5VT25 CRY2-201ENST00000417225 2053 ntTSL 2 BASIC22.34■■□□□ 1.17
CDC42BPAQ5VT25 AC006064.2-201ENST00000501075 2196 ntTSL 2 BASIC22.34■■□□□ 1.17
CDC42BPAQ5VT25 MIEF1-202ENST00000402881 2269 ntTSL 1 (best) BASIC22.34■■□□□ 1.17
CDC42BPAQ5VT25 DENND6A-201ENST00000311128 4655 ntAPPRIS P1 TSL 1 (best) BASIC22.34■■□□□ 1.17
CDC42BPAQ5VT25 RNF187-201ENST00000305943 3017 ntAPPRIS ALT2 TSL 1 (best) BASIC22.33■■□□□ 1.17
CDC42BPAQ5VT25 TOMM22-201ENST00000216034 2040 ntAPPRIS P1 TSL 1 (best) BASIC22.33■■□□□ 1.17
CDC42BPAQ5VT25 CYP51A1P3-201ENST00000400072 1428 ntBASIC22.33■■□□□ 1.17
CDC42BPAQ5VT25 MAP1LC3B-201ENST00000268607 2688 ntAPPRIS P1 TSL 1 (best) BASIC22.33■■□□□ 1.17
CDC42BPAQ5VT25 RABL2B-202ENST00000395590 2380 ntTSL 2 BASIC22.33■■□□□ 1.17
CDC42BPAQ5VT25 ETNPPL-201ENST00000296486 2099 ntAPPRIS P3 TSL 1 (best) BASIC22.33■■□□□ 1.17
CDC42BPAQ5VT25 CIT-219ENST00000612548 1799 ntTSL 1 (best) BASIC22.33■■□□□ 1.17
CDC42BPAQ5VT25 C2CD3-213ENST00000539061 2722 ntTSL 2 BASIC22.33■■□□□ 1.17
CDC42BPAQ5VT25 PRAL-201ENST00000624952 3286 ntBASIC22.33■■□□□ 1.17
CDC42BPAQ5VT25 HFE-201ENST00000309234 1158 ntAPPRIS ALT2 TSL 2 BASIC22.33■■□□□ 1.17
CDC42BPAQ5VT25 HIST2H2BA-201ENST00000412169 381 ntBASIC22.33■■□□□ 1.17
CDC42BPAQ5VT25 HVCN1-203ENST00000439744 1215 ntTSL 2 BASIC22.33■■□□□ 1.17
CDC42BPAQ5VT25 LINC01563-201ENST00000456235 750 ntTSL 2 BASIC22.33■■□□□ 1.17
CDC42BPAQ5VT25 AC069185.1-202ENST00000533405 471 ntTSL 3 BASIC22.33■■□□□ 1.17
CDC42BPAQ5VT25 AP005901.3-201ENST00000581666 415 ntTSL 3 BASIC22.33■■□□□ 1.17
CDC42BPAQ5VT25 AC093330.1-206ENST00000582546 812 ntTSL 3 BASIC22.33■■□□□ 1.17
CDC42BPAQ5VT25 PIN1-207ENST00000588695 648 ntAPPRIS P1 TSL 2 BASIC22.33■■□□□ 1.17
CDC42BPAQ5VT25 TMIGD2-204ENST00000600349 333 ntAPPRIS ALT2 TSL 1 (best) BASIC22.33■■□□□ 1.17
CDC42BPAQ5VT25 PLAGL1-211ENST00000625622 3216 ntAPPRIS P1 TSL 2 BASIC22.33■■□□□ 1.16
CDC42BPAQ5VT25 FBXO21-201ENST00000330622 2906 ntAPPRIS P3 TSL 1 (best) BASIC22.33■■□□□ 1.16
CDC42BPAQ5VT25 IVL-201ENST00000368764 2153 ntAPPRIS P1 TSL 2 BASIC22.33■■□□□ 1.16
CDC42BPAQ5VT25 WFIKKN2-202ENST00000426127 2193 ntTSL 2 BASIC22.33■■□□□ 1.16
CDC42BPAQ5VT25 LINC02076-201ENST00000577684 1871 ntTSL 1 (best) BASIC22.33■■□□□ 1.16
CDC42BPAQ5VT25 COL25A1-201ENST00000399126 2674 ntAPPRIS ALT2 TSL 5 BASIC22.33■■□□□ 1.16
CDC42BPAQ5VT25 NLE1-202ENST00000442241 2588 ntAPPRIS P1 TSL 1 (best) BASIC22.32■■□□□ 1.16
CDC42BPAQ5VT25 KLC1-207ENST00000445352 2416 ntTSL 5 BASIC22.32■■□□□ 1.16
CDC42BPAQ5VT25 NPFF-201ENST00000267017 592 ntAPPRIS P1 TSL 1 (best) BASIC22.32■■□□□ 1.16
CDC42BPAQ5VT25 C2orf70-201ENST00000329615 731 ntAPPRIS P1 TSL 5 BASIC22.32■■□□□ 1.16
CDC42BPAQ5VT25 RPS9-204ENST00000391753 709 ntAPPRIS P1 TSL 1 (best) BASIC22.32■■□□□ 1.16
CDC42BPAQ5VT25 RHEB-207ENST00000496004 744 ntTSL 2 BASIC22.32■■□□□ 1.16
CDC42BPAQ5VT25 SNCB-203ENST00000506696 552 ntAPPRIS P1 TSL 5 BASIC22.32■■□□□ 1.16
CDC42BPAQ5VT25 DCTPP1-202ENST00000565758 749 ntTSL 3 BASIC22.32■■□□□ 1.16
CDC42BPAQ5VT25 AC015917.2-201ENST00000580714 493 ntTSL 3 BASIC22.32■■□□□ 1.16
CDC42BPAQ5VT25 LINC01224-201ENST00000593573 798 ntTSL 4 BASIC22.32■■□□□ 1.16
CDC42BPAQ5VT25 MRPL37P1-201ENST00000592451 1337 ntBASIC22.32■■□□□ 1.16
CDC42BPAQ5VT25 ZNF652-202ENST00000430262 4701 ntAPPRIS P1 TSL 1 (best) BASIC22.32■■□□□ 1.16
CDC42BPAQ5VT25 THEMIS2-202ENST00000373921 2687 ntAPPRIS P1 TSL 5 BASIC22.32■■□□□ 1.16
CDC42BPAQ5VT25 DLG3-201ENST00000194900 6112 ntAPPRIS ALT2 TSL 5 BASIC22.32■■□□□ 1.16
CDC42BPAQ5VT25 NFATC4-222ENST00000555590 2830 ntAPPRIS ALT2 TSL 1 (best) BASIC22.32■■□□□ 1.16
CDC42BPAQ5VT25 LAT2-204ENST00000398475 2453 ntAPPRIS P2 TSL 1 (best) BASIC22.32■■□□□ 1.16
CDC42BPAQ5VT25 AC139712.1-201ENST00000378256 1875 ntBASIC22.32■■□□□ 1.16
CDC42BPAQ5VT25 EPN1-203ENST00000411543 2621 ntTSL 1 (best) BASIC22.32■■□□□ 1.16
CDC42BPAQ5VT25 STIM2-202ENST00000465503 3613 ntAPPRIS ALT2 TSL 1 (best) BASIC22.32■■□□□ 1.16
CDC42BPAQ5VT25 TCL1A-203ENST00000554012 1391 ntAPPRIS P1 TSL 1 (best) BASIC22.32■■□□□ 1.16
CDC42BPAQ5VT25 AC092198.1-201ENST00000447651 2691 ntTSL 2 BASIC22.31■■□□□ 1.16
Retrieved 100 of 98,524 protein–RNA pairs in 37 ms